Factsheet for GSMUA_Achr6P05660_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 4
endoplasmic reticulum 1
cytosol 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G418500.1	Wheat	mitochondrion	58.25	56.15
TraesCS5A01G408700.1	Wheat	mitochondrion	57.68	56.15
TraesCS5B01G413400.3	Wheat	mitochondrion	57.96	55.96
VIT_18s0001g12470.t01	Wine grape	mitochondrion	57.96	55.8
HORVU5Hr1G099090.3	Barley	mitochondrion	57.25	55.73
KRH05816	Soybean	endoplasmic reticulum	55.52	55.36
Zm00001d034250_P002	Maize	mitochondrion	57.96	55.27
KRH15210	Soybean	mitochondrion	55.95	54.85
Os03t0775200-01	Rice	mitochondrion	57.1	54.6
CDY26666	Canola	mitochondrion	54.23	52.72
Bra025737.1-P	Field mustard	mitochondrion	54.38	52.64
CDY67390	Canola	mitochondrion	54.38	52.64
Solyc04g080360.2.1	Tomato	nucleus	58.11	52.06
PGSC0003DMT400009562	Potato	golgi, mitochondrion	58.11	52.06
AT1G19430.1	Thale cress	mitochondrion	53.66	51.66
GSMUA_Achr8P32550_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	39.6	41.26
GSMUA_Achr7P23260_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	40.17	38.36
GSMUA_Achr4P18750_001	Banana	endoplasmic reticulum, golgi	32.86	36.82
GSMUA_Achr9P19890_001	Banana	cytosol	23.1	35.78
GSMUA_Achr5P28990_001	Banana	cytosol	27.83	34.83
GSMUA_Achr8P30140_001	Banana	nucleus	39.17	34.64
GSMUA_Achr9P03780_001	Banana	cytosol	27.83	34.52
GSMUA_Achr5P25650_001	Banana	cytosol	18.65	33.68
GSMUA_Achr4P19870_001	Banana	golgi, mitochondrion	39.45	33.33
GSMUA_Achr6P36560_001	Banana	endoplasmic reticulum, golgi, vacuole	29.12	32.74
GSMUA_Achr11P...	Banana	mitochondrion	39.02	32.65
GSMUA_Achr4P27550_001	Banana	extracellular, plasma membrane	26.97	32.58
GSMUA_Achr4P24710_001	Banana	cytosol	23.67	32.29
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	26.54	32.06
GSMUA_Achr5P21350_001	Banana	endoplasmic reticulum	28.55	32.05
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, golgi	24.39	32.02
GSMUA_Achr1P20520_001	Banana	endoplasmic reticulum, golgi, vacuole	28.41	31.88
GSMUA_Achr5P13670_001	Banana	plastid	26.83	31.43
GSMUA_Achr7P20830_001	Banana	endoplasmic reticulum, golgi, vacuole	27.4	31.36
GSMUA_Achr11P...	Banana	golgi, mitochondrion	26.97	31.33
GSMUA_Achr8P08230_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	39.31	31.24
EER93372	Sorghum	mitochondrion	58.54	31.14
GSMUA_Achr4P29040_001	Banana	cytosol, golgi, mitochondrion, peroxisome	26.97	30.97
GSMUA_Achr4P18470_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	26.54	30.94
GSMUA_Achr5P20080_001	Banana	mitochondrion	26.69	30.85
GSMUA_Achr5P03280_001	Banana	plastid	25.25	30.66
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi	26.83	30.31
GSMUA_Achr3P01520_001	Banana	endoplasmic reticulum, golgi	25.54	30.17
GSMUA_Achr3P09140_001	Banana	endoplasmic reticulum, golgi, vacuole	25.82	30.15
GSMUA_Achr3P20050_001	Banana	endoplasmic reticulum, golgi	25.25	29.83
GSMUA_Achr1P11480_001	Banana	cytosol	26.26	29.71
GSMUA_Achr1P04180_001	Banana	cytosol	24.96	28.76
GSMUA_Achr8P16940_001	Banana	endoplasmic reticulum, golgi	12.77	24.93
GSMUA_Achr5P18010_001	Banana	nucleus	26.54	24.73

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0032259
EnsemblPlantsGene:GSMUA_Achr6G05660_001	EnsemblPlants:GSMUA_Achr6P05660_001	EnsemblPlants:GSMUA_Achr6T05660_001	UniProt:M0T4G4	PFAM:PF03141	PANTHER:PTHR10108
PANTHER:PTHR10108:SF733	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI00029482B1
SEG:seg	:	:	:	:	:

Description

Probable methyltransferase PMT28 [Source:GMGC_GENE;Acc:GSMUA_Achr6G05660_001]

Coordinates

chr6:-:3813058..3818595

Molecular Weight (calculated)

78191.9 Da

IEP (calculated)

6.822

GRAVY (calculated)

-0.549

Length

697 amino acids

Sequence
(BLAST)

001: MASARLGRSI KRAPLGFGTK VSLVFFLGLA FVVTWWTFSS PSASAVSSQR SSFDDIEALP ATPAPRKGKE QSRKKAHQKK PPDSLPKNEN SKRTAVGSKN
101: DKKEKEKKKG GGGGEIEQVA AAKNETSKPE GQQDEEESEE KVDVEGLEEV TDSENATDED MEEGVDANAE DDAGEDNLKN RSKKKKKLGP LFDPKARYTW
201: KLCSGKTGHN YIPCVDMEGG HRHHERSCPR TPITCLVSLP KDYKPPEAWP ERESKIWFKN LAHPKLSEAI KTQSWLNLSG DYLFIPSEES EFKGGAQHYV
301: SSIEEMVPDI EWGKNIRVVL DIGCTGAGFG AVLLKKDVAT LSLGLMSDQT DMAQLALERG IPAVVGNLRS RRLPFPSSVF DAIHCGECGI PWHSNGGRLL
401: LEINRVLRPG GYFITSTKHG DIDAEEGMTA LLSSVCWNIL AHKADEVSET NIRIYQRPTS NDVYEIRATK EPPFCRENEN QDAAWYTPVK ACLHKVAAAI
501: EQRGTDWPEE WPKRLETFPE WLADSEDKLT KDHEHWKAII DKSYLAGLGI DWSNIRNVMD MKAINGGFAA ALASQKVWVM NVVPVHAPNT LPIIFERGLL
601: GIYHDWCEPF STYPRSYDLL HADHLFSRLK NRCKQPIVIV VEMDRILRPG GWVIIRDKLE ILNPLETILR SLHWDIRMTY GKDKEGLLCA QKTTWRP

Best Arabidopsis Sequence Match ( AT1G19430.3 )
(BLAST)

001: MMERKREMGI AYFARRIKQP RGIWVKMTFI VVLGLCFVFF WSFLSSSAST FNVQRESFDD IAEPVSSRTK SAHEVSESSK LHERGKVESG SKSKEGKKVG
101: GSSVHKHETK KKKEHAVSHP HKKKDVPKPV VEEVVVKEDQ EHEEAESDDS DQSNKEDGEE GTESDGNEGE SDGNGDGSVD DSSASVDEEV EEKNEEVTVN
201: EISKKRKRKG PVFDPKAEYS WRLCNTRSKH NYMPCIDNDG LIGRLQSYRH RERSCPKKPV MCLVPLPHDG YDPPVSWPES KSKILYKNVA HPKLAAYIKK
301: HNWVNETGEY LSFPQNQTTF NGNVLQYLEF IQEMVPDIEW GKNVRIVLDI GCSDSSFVAA LLDKDVLTVS LGLKDDLVDL AQVALERGFP TFVSSLASRR
401: LPFPSGVFDT IHCAACGVHW HSHGGKLLLE MNRILRPNGY FILSSNNDKI EDDEAMTALT ASICWNILAH KTEEASEMGV RIYQKPESND IYELRRKKNP
501: PLCEDNENPD AAWYVPMKTC IYEIPSAIEQ HGAEWPEEWP KRLETYPEWL TSKEKAMEDT NHWNAMVNKS YLTGLGIDWL HIRNVMDMTA IYGGFGASLV
601: KQNVWVMNVV PVHSPDTLPF IYERGLLGIY HDWCEPFGTY PRSYDLLHAD HLFSRLKNRC KQPASIVVEM DRLTRPGGWV VVRDKVEILE PLEEILRSLH
701: WEIRMTYAQD KEGMLCAQKT LWRP

Arabidopsis Description

Probable methyltransferase PMT28 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.