Factsheet for TraesCS5B01G413400.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G418500.1	Wheat	mitochondrion	96.95	96.82
HORVU5Hr1G099090.3	Barley	mitochondrion	95.29	96.09
TraesCS5A01G408700.1	Wheat	mitochondrion	95.01	95.81
Os03t0775200-01	Rice	mitochondrion	75.76	75.03
Zm00001d034250_P002	Maize	mitochondrion	75.35	74.42
GSMUA_Achr6P05660_001	Banana	mitochondrion	55.96	57.96
KRH05816	Soybean	endoplasmic reticulum	51.8	53.51
KRH15210	Soybean	mitochondrion	51.94	52.74
VIT_18s0001g12470.t01	Wine grape	mitochondrion	51.94	51.8
CDY67390	Canola	mitochondrion	48.75	48.89
CDY26666	Canola	mitochondrion	48.48	48.81
Bra025737.1-P	Field mustard	mitochondrion	48.62	48.75
AT1G19430.1	Thale cress	mitochondrion	48.2	48.07
PGSC0003DMT400009562	Potato	golgi, mitochondrion	50.69	47.04
Solyc04g080360.2.1	Tomato	nucleus	50.69	47.04
EER93372	Sorghum	mitochondrion	76.59	42.21
TraesCS3B01G439800.3	Wheat	cytosol, golgi, mitochondrion, plastid, vacuole	37.81	34.0
TraesCS3B01G427600.1	Wheat	cytosol	17.73	33.51
TraesCS1B01G305900.1	Wheat	mitochondrion	30.47	32.98
TraesCS6B01G029000.1	Wheat	cytosol	28.25	32.33
TraesCS2B01G419000.1	Wheat	golgi, plastid	25.76	32.18
TraesCS7B01G342700.1	Wheat	plastid	26.45	31.16
TraesCS1B01G226800.1	Wheat	endoplasmic reticulum, golgi	26.04	31.13
TraesCS1B01G170600.2	Wheat	endoplasmic reticulum, golgi	26.45	31.01
TraesCS6B01G269400.1	Wheat	mitochondrion, plastid	27.56	30.95
TraesCS1B01G250100.1	Wheat	plasma membrane	25.48	30.92
TraesCS2B01G418400.1	Wheat	golgi	27.29	30.88
TraesCS5B01G423200.2	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	26.32	30.6
TraesCS3B01G380800.1	Wheat	plastid	30.19	30.36
TraesCS3B01G395100.1	Wheat	plastid	29.64	30.27
TraesCS5B01G225500.1	Wheat	cytosol, endoplasmic reticulum, golgi	25.35	29.8
TraesCS4B01G098500.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	36.15	29.13
TraesCS1B01G213600.1	Wheat	endoplasmic reticulum	25.48	28.89
TraesCS4B01G125500.1	Wheat	endoplasmic reticulum	24.38	28.48
TraesCS7B01G286500.1	Wheat	mitochondrion	35.04	27.68
TraesCS5B01G120300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	36.01	25.52

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF733
InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS5B01G413400	EnsemblPlants:TraesCS5B01G413400.3	TIGR:cd02440
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:588499909..588503344

Molecular Weight (calculated)

81090.0 Da

IEP (calculated)

6.951

GRAVY (calculated)

-0.559

Length

722 amino acids

Sequence
(BLAST)

001: MTVFRGPPGR PSALVSWWRR SPPLGFAAKV SIAIALGLSF VVTWTTLAPT SSSQQISTER TYFAADVADP PPGALAHPRN ATARAVHRKP RPASSPRGRK
101: KRRSPPRSRR PNATPSPDAA ALRSNLTEPE QANKLEPEWE WEDEQEPELS VPEDDADATG KAPKEEENDK APALEWADES SELDAEEEED PEAAKGKASK
201: KKKKLPPLFS PAAHYHWKLC SAKSGHHYTP CVDFDGDGSQ RHHERSCPRS PVTCLVSLPK EYKLPAPWPE RKEKIWYGNV GHPRLSSYAK DHSWLNRTGE
301: HLVFPPEESE FKGGARHYID TIDEMAPDLD WGKNIRIALD IGCKSAGFGV ALLEKDVITL SLGLTNDQTD LAQVALERGI PATIGSLGSR RLPFPSGSFD
401: IIHCSECNIP WHSNGGKLLI EMNRILRPGG YFVISSRHGD LESEEGISAS MTAVCWNVIA YNSDDVSELG VKIFQRPASN DEYDLRAKKD PPFCKEEQNK
501: ATAWYTPIKH CLHKAPAGIE ERGSEWPEEW PKRLETFPDW LGDLQTRVSA DHSHWKAVVE KSYLDGLGIN WTNIRNVLDM KAVYGGFAAA LSSEKVWVMN
601: VVPVHAPDTL PVIFERGLVG VYHDWCEPFS TYPRSYDLLH ADHLFSRLKN RYVCRMKCKE PVSILVEMDR ILRPGGWAII REKLEILDPL EAILKSLHWE
701: IVMTFRKDKE GIMSVKKTTW RP

Best Arabidopsis Sequence Match ( AT1G19430.3 )
(BLAST)

001: MMERKREMGI AYFARRIKQP RGIWVKMTFI VVLGLCFVFF WSFLSSSAST FNVQRESFDD IAEPVSSRTK SAHEVSESSK LHERGKVESG SKSKEGKKVG
101: GSSVHKHETK KKKEHAVSHP HKKKDVPKPV VEEVVVKEDQ EHEEAESDDS DQSNKEDGEE GTESDGNEGE SDGNGDGSVD DSSASVDEEV EEKNEEVTVN
201: EISKKRKRKG PVFDPKAEYS WRLCNTRSKH NYMPCIDNDG LIGRLQSYRH RERSCPKKPV MCLVPLPHDG YDPPVSWPES KSKILYKNVA HPKLAAYIKK
301: HNWVNETGEY LSFPQNQTTF NGNVLQYLEF IQEMVPDIEW GKNVRIVLDI GCSDSSFVAA LLDKDVLTVS LGLKDDLVDL AQVALERGFP TFVSSLASRR
401: LPFPSGVFDT IHCAACGVHW HSHGGKLLLE MNRILRPNGY FILSSNNDKI EDDEAMTALT ASICWNILAH KTEEASEMGV RIYQKPESND IYELRRKKNP
501: PLCEDNENPD AAWYVPMKTC IYEIPSAIEQ HGAEWPEEWP KRLETYPEWL TSKEKAMEDT NHWNAMVNKS YLTGLGIDWL HIRNVMDMTA IYGGFGASLV
601: KQNVWVMNVV PVHSPDTLPF IYERGLLGIY HDWCEPFGTY PRSYDLLHAD HLFSRLKNRC KQPASIVVEM DRLTRPGGWV VVRDKVEILE PLEEILRSLH
701: WEIRMTYAQD KEGMLCAQKT LWRP

Arabidopsis Description

Probable methyltransferase PMT28 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.