Factsheet for TraesCS6B01G029000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G021300.1	Wheat	cytosol	98.89	98.89
TraesCS6D01G025000.1	Wheat	cytosol	98.73	98.73
Os10t0510400-01	Rice	golgi, plasma membrane	83.84	83.44
EER93951	Sorghum	peroxisome	81.93	81.16
HORVU6Hr1G003900.3	Barley	cytosol	95.4	81.02
Zm00001d032476_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, peroxisome	61.65	80.37
GSMUA_Achr9P19890_001	Banana	cytosol	51.51	72.22
GSMUA_Achr4P24710_001	Banana	cytosol	57.21	70.65
CDX85977	Canola	cytosol	54.04	70.6
CDX93797	Canola	cytosol	54.04	70.6
GSMUA_Achr4P29040_001	Banana	cytosol, golgi, mitochondrion, peroxisome	67.83	70.51
VIT_02s0025g03200.t01	Wine grape	cytosol	66.24	66.14
KRH60099	Soybean	cytosol	64.66	65.49
KRH41379	Soybean	cytosol	64.98	65.18
PGSC0003DMT400014851	Potato	cytosol	64.34	65.06
CDY70936	Canola	cytosol	18.86	65.03
CDX94256	Canola	cytosol	63.71	64.94
CDX84046	Canola	cytosol	62.92	64.87
CDY25257	Canola	cytosol	63.71	64.84
Bra033172.1-P	Field mustard	cytosol	63.71	64.84
AT4G10440.1	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, nucleus	64.66	64.45
AT1G33170.1	Thale cress	cytosol	65.13	64.32
GSMUA_Achr1P04180_001	Banana	cytosol	61.65	64.3
Solyc08g013740.2.1	Tomato	unclear	64.18	64.18
Bra037916.1-P	Field mustard	cytosol	63.55	64.16
CDX99539	Canola	cytosol	63.23	63.84
CDX99540	Canola	cytosol	54.2	63.69
CDY44966	Canola	cytosol	62.44	63.55
Bra041005.1-P	Field mustard	cytosol	64.18	63.48
Bra035476.1-P	Field mustard	cytosol	63.39	62.4
TraesCS6B01G269400.1	Wheat	mitochondrion, plastid	57.84	56.77
TraesCS2B01G418400.1	Wheat	golgi	57.21	56.58
TraesCS1B01G226800.1	Wheat	endoplasmic reticulum, golgi	51.51	53.81
TraesCS5B01G423200.2	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	52.77	53.62
TraesCS5B01G225500.1	Wheat	cytosol, endoplasmic reticulum, golgi	51.98	53.42
TraesCS3B01G427600.1	Wheat	cytosol	31.22	51.57
TraesCS4B01G125500.1	Wheat	endoplasmic reticulum	48.97	50.0
TraesCS2B01G419000.1	Wheat	golgi, plastid	38.99	42.56
TraesCS1B01G213600.1	Wheat	endoplasmic reticulum	42.63	42.23
TraesCS7B01G342700.1	Wheat	plastid	38.67	39.8
TraesCS1B01G170600.2	Wheat	endoplasmic reticulum, golgi	36.93	37.82
TraesCS1B01G250100.1	Wheat	plasma membrane	33.44	35.46
TraesCS3B01G395100.1	Wheat	plastid	36.61	32.67
TraesCS1B01G305900.1	Wheat	mitochondrion	32.96	31.18
TraesCS3B01G439800.3	Wheat	cytosol, golgi, mitochondrion, plastid, vacuole	38.51	30.26
TraesCS3B01G380800.1	Wheat	plastid	33.44	29.39
TraesCS5B01G413400.3	Wheat	mitochondrion	32.33	28.25
TraesCS7B01G286500.1	Wheat	mitochondrion	36.77	25.38
TraesCS4B01G098500.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	35.97	25.33
TraesCS5B01G120300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	34.23	21.2

Protein Annotations

EnsemblPlants:TraesCS6B01G029000.1	EnsemblPlantsGene:TraesCS6B01G029000	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	ncoils:Coil
PANTHER:PTHR10108	PANTHER:PTHR10108:SF990	PFAM:PF03141	SUPFAM:SSF53335	TIGR:cd02440	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:17417704..17420175

Molecular Weight (calculated)

71815.6 Da

IEP (calculated)

7.942

GRAVY (calculated)

-0.492

Length

631 amino acids

Sequence
(BLAST)

001: MAKDYPASPK AQHLQESKKQ RLTYVLVVSA LCVAFYVLGA WQNSTMPNPV ADSAISRVDC DTVAQRDGSV PSFAPASENV LDFDAHHQLN LSNTESAVQQ
101: FPACPLNQSE YTPCEDRKRG RLFDRDMLIY RERHCPGKDE QIRCLIPAPP KYKNPFRWPE SRDVAWFDNI PHKELSIEKA VQNWIRVEGN KFRFPGGGTM
201: FPHGADAYID EISKLISLSD GRIRTAIDTG CGVASFGAYL LKRNIITVSF APRDTHEAQV QFALERGVPA ILGVMGSIRL PYPSRAFDLA HCSRCLIPWG
301: GHDGLYLAEI DRILRPGGYW IHSGPPINWK THHNGWKRAE EDLKREQDKI EDVARSLCWN KVAEKEDLSI WQKPKNHLEC ADIKKKHKIP HVCKSDNPDA
401: AWYKKMESCL TPLPEVSNQG SIAGGEVARW PKRALTVPPR VKRGTIPGID EKKFEEDMKL WEKRLAYYKR TTPIAQGRYR NVMDMNANLG GFAASLVKYP
501: VWVMNVVPVN SDKDTLGAIY ERGFIGTYQD WCEAFSTYPR TYDLLHADNL FSIYQDRCDI TDILLEMDRI LRPEGTAIIR DTVDVLTKVQ AIAKRMRWDS
601: RILDHEDGPF NQEKVLVAVK TYWTADPSEH S

Best Arabidopsis Sequence Match ( AT4G10440.1 )
(BLAST)

001: MAKENSGHHH QTEARRKKLT LILGVSGLCI LFYVLGAWQA NTVPSSISKL GCETQSNPSS SSSSSSSSES AELDFKSHNQ IELKETNQTI KYFEPCELSL
101: SEYTPCEDRQ RGRRFDRNMM KYRERHCPVK DELLYCLIPP PPNYKIPFKW PQSRDYAWYD NIPHKELSVE KAVQNWIQVE GDRFRFPGGG TMFPRGADAY
201: IDDIARLIPL TDGGIRTAID TGCGVASFGA YLLKRDIMAV SFAPRDTHEA QVQFALERGV PAIIGIMGSR RLPYPARAFD LAHCSRCLIP WFKNDGLYLM
301: EVDRVLRPGG YWILSGPPIN WKQYWRGWER TEEDLKKEQD SIEDVAKSLC WKKVTEKGDL SIWQKPLNHI ECKKLKQNNK SPPICSSDNA DSAWYKDLET
401: CITPLPETNN PDDSAGGALE DWPDRAFAVP PRIIRGTIPE MNAEKFREDN EVWKERIAHY KKIVPELSHG RFRNIMDMNA FLGGFAASML KYPSWVMNVV
501: PVDAEKQTLG VIYERGLIGT YQDWCEGFST YPRTYDMIHA GGLFSLYEHR CDLTLILLEM DRILRPEGTV VLRDNVETLN KVEKIVKGMK WKSQIVDHEK
601: GPFNPEKILV AVKTYWTGQP SDKNNNNNNN NNN

Arabidopsis Description

Probable methyltransferase PMT17 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZX8]
SUBAcon: [mitochondrion,endoplasmic reticulum,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.