Factsheet for VIT_02s0025g03200.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41379	Soybean	cytosol	79.11	79.49
KRH60099	Soybean	cytosol	78.16	79.29
GSMUA_Achr9P19890_001	Banana	cytosol	55.22	77.56
GSMUA_Achr4P24710_001	Banana	cytosol	61.71	76.32
GSMUA_Achr4P29040_001	Banana	cytosol, golgi, mitochondrion, peroxisome	72.94	75.95
GSMUA_Achr1P11480_001	Banana	cytosol	73.58	75.49
PGSC0003DMT400014851	Potato	cytosol	74.05	75.0
CDX85977	Canola	cytosol	57.12	74.74
CDX93797	Canola	cytosol	56.96	74.53
Solyc08g013740.2.1	Tomato	unclear	74.05	74.17
Os06t0103900-01	Rice	cytosol, golgi, mitochondrion, plastid	71.68	71.79
CDX99540	Canola	cytosol	60.76	71.51
CDX84046	Canola	cytosol	68.83	71.08
AT1G33170.1	Thale cress	cytosol	71.68	70.89
CDX99539	Canola	cytosol	69.78	70.56
CDY44966	Canola	cytosol	68.99	70.32
TraesCS7A01G031100.1	Wheat	endoplasmic reticulum, golgi	69.94	70.27
Bra037916.1-P	Field mustard	cytosol	69.46	70.24
EER89033	Sorghum	cytosol	68.83	70.16
AT4G10440.1	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, nucleus	70.09	69.98
TraesCS7D01G027500.1	Wheat	endoplasmic reticulum, golgi	69.62	69.95
TraesCS4A01G458400.1	Wheat	endoplasmic reticulum, golgi	69.62	69.95
Zm00001d035876_P002	Maize	cytosol	68.51	69.84
Bra041005.1-P	Field mustard	cytosol	70.41	69.75
CDX94256	Canola	cytosol	68.2	69.63
Os10t0510400-01	Rice	golgi, plasma membrane	69.78	69.56
Bra033172.1-P	Field mustard	cytosol	68.2	69.52
CDY25257	Canola	cytosol	68.2	69.52
Bra035476.1-P	Field mustard	cytosol	70.25	69.27
EER93951	Sorghum	peroxisome	69.62	69.07
GSMUA_Achr1P04180_001	Banana	cytosol	65.98	68.93
TraesCS6B01G029000.1	Wheat	cytosol	66.14	66.24
TraesCS6D01G025000.1	Wheat	cytosol	66.14	66.24
Zm00001d032476_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, peroxisome	50.63	66.12
TraesCS6A01G021300.1	Wheat	cytosol	65.98	66.09
CDY70936	Canola	cytosol	18.67	64.48
HORVU7Hr1G003860.2	Barley	plasma membrane	70.25	62.71
VIT_02s0012g00580.t01	Wine grape	endoplasmic reticulum, golgi	56.65	58.59
VIT_16s0100g00570.t01	Wine grape	mitochondrion	60.76	58.54
VIT_15s0048g01940.t01	Wine grape	mitochondrion	57.59	57.59
HORVU6Hr1G003900.3	Barley	cytosol	67.09	57.07
VIT_17s0000g06050.t01	Wine grape	cytosol	54.75	56.72
VIT_01s0026g02340.t01	Wine grape	golgi	54.59	54.25
VIT_05s0124g00530.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, vacuole	50.63	52.03
VIT_02s0033g01120.t01	Wine grape	cytosol	42.41	44.67
VIT_04s0023g02790.t01	Wine grape	cytosol	34.65	43.28
VIT_15s0048g01990.t01	Wine grape	mitochondrion	40.03	42.38
VIT_05s0049g01180.t01	Wine grape	endoplasmic reticulum, golgi	37.18	38.4
VIT_07s0005g03630.t01	Wine grape	endoplasmic reticulum, golgi	37.03	37.74
VIT_13s0067g01690.t01	Wine grape	endoplasmic reticulum, golgi	33.7	35.15
VIT_08s0007g05750.t01	Wine grape	endoplasmic reticulum, plasma membrane	32.75	34.44
VIT_18s0001g01600.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	35.76	33.93
VIT_13s0019g02250.t01	Wine grape	golgi	35.92	33.09
VIT_04s0044g01670.t01	Wine grape	cytosol	36.08	27.64
VIT_18s0001g01270.t01	Wine grape	plasma membrane	36.87	26.54
VIT_18s0001g12470.t01	Wine grape	mitochondrion	29.75	25.97

Protein Annotations

EntrezGene:100242751	wikigene:100242751	Gene3D:3.40.50.150	MapMan:35.1	ProteinID:CCB58332	ProteinID:CCB58332.1
UniProt:F6HUA9	EMBL:FN596251	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	EntrezGene:LOC100242751	wikigene:LOC100242751
PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF1058	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
TMHMM:TMhelix	UniParc:UPI00015CC5FC	ArrayExpress:VIT_02s0025g03200	EnsemblPlantsGene:VIT_02s0025g03200	EnsemblPlants:VIT_02s0025g03200.t01	RefSeq:XP_002270920
RefSeq:XP_002270920.1	RefSeq:XP_010660487.1	RefSeq:XP_010660490.1	RefSeq:XP_019081362.1	RefSeq:XP_019081364.1	RefSeq:XP_019081371.1
RefSeq:XP_019081376.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:+:2722704..2725030

Molecular Weight (calculated)

72117.8 Da

IEP (calculated)

7.389

GRAVY (calculated)

-0.460

Length

632 amino acids

Sequence
(BLAST)

001: MAKEYSGSPK HHQLESKRKR LTWILGVSGL CILFYILGAW QNTTPAPSNQ SEVYSRVGCD VGSPAAGDGH SSSSSLSSAS LDFESHHQVE INNSGGTQSF
101: PPCDMSYSEY TPCQDPVRAR KFDRNMLKYR ERHCPTKDEL LLCLIPAPPK YKNPFKWPQS RDYAWYDNIP HKELSIEKAV QNWIQVEGDR FRFPGGGTMF
201: PRGADAYIDD INELIPLTGG TIRTAIDTGC GVASWGAYLL KRDILAMSFA PRDTHEAQVQ FALERGVPAM IGILASQRMP YPARAFDMAH CSRCLIPWNA
301: YDGLYLLEVD RVLRPGGYWI LSGPPIRWKK YWRGWERTQE DLKQEQDAIE DVAMRLCWKK VFEKGDLAVW QKPINHIRCV ESRKLIKTPH ICKSDNPDTA
401: WYRDMETCIT PLPDVRDSEE VAGGALEKWP KRAFSIPPRI NSGSLPGITA QNFQEDNELW KDRVAHYKQI IRGLHQGRYR NVMDMNAYLG GFAAALLKYH
501: VWVMNVIPAN SNQDTLGVIY ERGFIGTYHD WCEAFSTYPR TYDLIHASNV FSIYQDRCDI THILLEIDRI LRPEGTAIFR DTVEVLVKIQ SITDGMRWNS
601: QIMDHESGPF NPEKILVAVK SYWTGEANPK PH

Best Arabidopsis Sequence Match ( AT1G33170.1 )
(BLAST)

001: MAKENSSHSL AEAKRKRLTW ILCVSGLCIL SYVLGSWQTN TVPTSSSEAY SRMGCDETST TTRAQTTQTQ TNPSSDDTSS SLSSSEPVEL DFESHHKLEL
101: KITNQTVKYF EPCDMSLSEY TPCEDRERGR RFDRNMMKYR ERHCPSKDEL LYCLIPPPPN YKIPFKWPQS RDYAWYDNIP HKELSIEKAI QNWIQVEGER
201: FRFPGGGTMF PRGADAYIDD IARLIPLTDG AIRTAIDTGC GVASFGAYLL KRDIVAMSFA PRDTHEAQVQ FALERGVPAI IGIMGSRRLP YPARAFDLAH
301: CSRCLIPWFQ NDGLYLTEVD RVLRPGGYWI LSGPPINWKK YWKGWERSQE DLKQEQDSIE DAARSLCWKK VTEKGDLSIW QKPINHVECN KLKRVHKTPP
401: LCSKSDLPDF AWYKDLESCV TPLPEANSSD EFAGGALEDW PNRAFAVPPR IIGGTIPDIN AEKFREDNEV WKERISYYKQ IMPELSRGRF RNIMDMNAYL
501: GGFAAAMMKY PSWVMNVVPV DAEKQTLGVI FERGFIGTYQ DWCEGFSTYP RTYDLIHAGG LFSIYENRCD VTLILLEMDR ILRPEGTVVF RDTVEMLTKI
601: QSITNGMRWK SRILDHERGP FNPEKILLAV KSYWTGPSS

Arabidopsis Description

Probable methyltransferase PMT18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C884]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.