Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G029000.1 | Wheat | cytosol | 98.89 | 98.89 |
| TraesCS6D01G025000.1 | Wheat | cytosol | 98.73 | 98.73 |
| Os10t0510400-01 | Rice | golgi, plasma membrane | 83.84 | 83.44 |
| HORVU6Hr1G003900.3 | Barley | cytosol | 95.25 | 80.89 |
| EER93951 | Sorghum | peroxisome | 81.62 | 80.85 |
| Zm00001d032476_P001 | Maize | cytosol, endoplasmic reticulum, mitochondrion, peroxisome | 61.33 | 79.96 |
| GSMUA_Achr9P19890_001 | Banana | cytosol | 51.82 | 72.67 |
| GSMUA_Achr4P24710_001 | Banana | cytosol | 57.53 | 71.04 |
| GSMUA_Achr4P29040_001 | Banana | cytosol, golgi, mitochondrion, peroxisome | 68.15 | 70.84 |
| CDX85977 | Canola | cytosol | 54.2 | 70.81 |
| CDX93797 | Canola | cytosol | 54.2 | 70.81 |
| VIT_02s0025g03200.t01 | Wine grape | cytosol | 66.09 | 65.98 |
| KRH60099 | Soybean | cytosol | 64.82 | 65.65 |
| CDX84046 | Canola | cytosol | 63.07 | 65.03 |
| KRH41379 | Soybean | cytosol | 64.82 | 65.02 |
| PGSC0003DMT400014851 | Potato | cytosol | 64.18 | 64.9 |
| CDX94256 | Canola | cytosol | 63.39 | 64.62 |
| CDY25257 | Canola | cytosol | 63.39 | 64.52 |
| Bra033172.1-P | Field mustard | cytosol | 63.39 | 64.52 |
| GSMUA_Achr1P04180_001 | Banana | cytosol | 61.65 | 64.3 |
| AT4G10440.1 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 64.5 | 64.3 |
| AT1G33170.1 | Thale cress | cytosol | 64.98 | 64.16 |
| Bra037916.1-P | Field mustard | cytosol | 63.39 | 64.0 |
| CDX99540 | Canola | cytosol | 54.36 | 63.87 |
| Solyc08g013740.2.1 | Tomato | unclear | 63.87 | 63.87 |
| CDY44966 | Canola | cytosol | 62.6 | 63.71 |
| CDX99539 | Canola | cytosol | 63.07 | 63.68 |
| Bra041005.1-P | Field mustard | cytosol | 64.34 | 63.64 |
| CDY70936 | Canola | cytosol | 18.38 | 63.39 |
| Bra035476.1-P | Field mustard | cytosol | 63.55 | 62.56 |
| TraesCS7A01G031100.1 | Wheat | endoplasmic reticulum, golgi | 61.65 | 61.84 |
| TraesCS4A01G458400.1 | Wheat | endoplasmic reticulum, golgi | 61.49 | 61.69 |
| TraesCS6A01G256000.1 | Wheat | mitochondrion | 57.69 | 56.79 |
| TraesCS2A01G400300.1 | Wheat | mitochondrion | 57.05 | 56.78 |
| TraesCS1A01G213400.1 | Wheat | endoplasmic reticulum, golgi | 51.98 | 54.3 |
| TraesCS5A01G226900.1 | Wheat | golgi | 52.14 | 53.58 |
| TraesCS5A01G421600.2 | Wheat | endoplasmic reticulum | 52.61 | 53.46 |
| TraesCS4A01G163200.1 | Wheat | endoplasmic reticulum | 47.54 | 47.62 |
| TraesCS3A01G475800.1 | Wheat | cytosol | 35.18 | 44.22 |
| TraesCS2A01G400900.1 | Wheat | golgi, mitochondrion | 39.78 | 43.58 |
| TraesCS3A01G395800.1 | Wheat | endoplasmic reticulum | 41.52 | 42.81 |
| TraesCS1A01G198600.1 | Wheat | golgi | 42.16 | 42.36 |
| TraesCS7A01G444200.1 | Wheat | plastid | 38.83 | 40.3 |
| TraesCS1A01G154400.2 | Wheat | golgi | 37.08 | 37.2 |
| TraesCS1A01G233500.1 | Wheat | endoplasmic reticulum, plasma membrane | 33.28 | 35.0 |
| TraesCS3A01G362600.1 | Wheat | golgi | 36.77 | 33.05 |
| TraesCS1A01G297000.1 | Wheat | golgi | 32.96 | 31.28 |
| TraesCS2A01G560300.1 | Wheat | mitochondrion, peroxisome, plastid | 36.29 | 30.95 |
| TraesCS3A01G406100.1 | Wheat | plastid | 38.19 | 29.83 |
| TraesCS3A01G348800.1 | Wheat | golgi | 33.44 | 29.76 |
| TraesCS5A01G408700.1 | Wheat | mitochondrion | 32.33 | 28.49 |
| TraesCS4A01G220000.1 | Wheat | golgi | 35.34 | 24.94 |
| TraesCS7A01G383700.2 | Wheat | plastid | 34.71 | 23.88 |
| TraesCS5A01G114100.1 | Wheat | endoplasmic reticulum | 34.39 | 20.89 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G021300.1 | EnsemblPlantsGene:TraesCS6A01G021300 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | InterPro:Put_SAM_MeTrfase | InterPro:SAM-dependent_MTases | ncoils:Coil |
| PANTHER:PTHR10108 | PANTHER:PTHR10108:SF990 | PFAM:PF03141 | SEG:seg | SUPFAM:SSF53335 | TIGR:cd02440 |
| TMHMM:TMhelix | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:10491958..10494748
Molecular Weight (calculated)
71883.6 Da
IEP (calculated)
7.522
GRAVY (calculated)
-0.496
Length
631 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKDYPASPK AQHLQESKKQ RLTYVLVVSA LCVAFYVLGA WQNSTMPNPV ADSAISRVDC DTMAQRDGSV PSFAPASENV LDFDAHHQLN LSDTESAVQQ
101: FPACPLNQSE YTPCEDRKRG RLFDRDMLIY RERHCPGKDE QIRCLIPAPP KYKNPFRWPE SRDVAWFDNI PHKELSIEKA VQNWIRVEGN KFRFPGGGTM
201: FPHGADAYID EISKLISLSD GRIRTAIDTG CGVASFGAYL LKRNIITVSF APRDTHEAQV QFALERGVPA ILGVMGSIRL PYPSRAFDLA HCSRCLIPWG
301: GHDGLYLAEI DRILRPGGYW IHSGPPINWK THHNGWKRAE EDLKREQDKI EDVARSLCWN KVAEKEDLSI WQKPKNHLEC ADIKKKHKIP HICKSDNPDA
401: AWYKKMESCL TPLPEVSNQG SIAGGEVARW PKRAFTVPPR VKRGTIPGID EKKFEDDMKL WEKRLAYYKR TTPIAQGRYR NVMDMNANLG GFAASLVKYP
501: VWVMNVVPVN SDKDTLGAIY ERGFIGTYQD WCEAFSTYPR TYDLLHADNL FSIYQDRCDI TDILLEMDRI LRPEGTAIIR DTVDVLTKVQ AIAQRMRWDS
601: RILDHEDGPF DQEKVLVAVK TYWTADPSEH S
101: FPACPLNQSE YTPCEDRKRG RLFDRDMLIY RERHCPGKDE QIRCLIPAPP KYKNPFRWPE SRDVAWFDNI PHKELSIEKA VQNWIRVEGN KFRFPGGGTM
201: FPHGADAYID EISKLISLSD GRIRTAIDTG CGVASFGAYL LKRNIITVSF APRDTHEAQV QFALERGVPA ILGVMGSIRL PYPSRAFDLA HCSRCLIPWG
301: GHDGLYLAEI DRILRPGGYW IHSGPPINWK THHNGWKRAE EDLKREQDKI EDVARSLCWN KVAEKEDLSI WQKPKNHLEC ADIKKKHKIP HICKSDNPDA
401: AWYKKMESCL TPLPEVSNQG SIAGGEVARW PKRAFTVPPR VKRGTIPGID EKKFEDDMKL WEKRLAYYKR TTPIAQGRYR NVMDMNANLG GFAASLVKYP
501: VWVMNVVPVN SDKDTLGAIY ERGFIGTYQD WCEAFSTYPR TYDLLHADNL FSIYQDRCDI TDILLEMDRI LRPEGTAIIR DTVDVLTKVQ AIAQRMRWDS
601: RILDHEDGPF DQEKVLVAVK TYWTADPSEH S
001: MAKENSGHHH QTEARRKKLT LILGVSGLCI LFYVLGAWQA NTVPSSISKL GCETQSNPSS SSSSSSSSES AELDFKSHNQ IELKETNQTI KYFEPCELSL
101: SEYTPCEDRQ RGRRFDRNMM KYRERHCPVK DELLYCLIPP PPNYKIPFKW PQSRDYAWYD NIPHKELSVE KAVQNWIQVE GDRFRFPGGG TMFPRGADAY
201: IDDIARLIPL TDGGIRTAID TGCGVASFGA YLLKRDIMAV SFAPRDTHEA QVQFALERGV PAIIGIMGSR RLPYPARAFD LAHCSRCLIP WFKNDGLYLM
301: EVDRVLRPGG YWILSGPPIN WKQYWRGWER TEEDLKKEQD SIEDVAKSLC WKKVTEKGDL SIWQKPLNHI ECKKLKQNNK SPPICSSDNA DSAWYKDLET
401: CITPLPETNN PDDSAGGALE DWPDRAFAVP PRIIRGTIPE MNAEKFREDN EVWKERIAHY KKIVPELSHG RFRNIMDMNA FLGGFAASML KYPSWVMNVV
501: PVDAEKQTLG VIYERGLIGT YQDWCEGFST YPRTYDMIHA GGLFSLYEHR CDLTLILLEM DRILRPEGTV VLRDNVETLN KVEKIVKGMK WKSQIVDHEK
601: GPFNPEKILV AVKTYWTGQP SDKNNNNNNN NNN
101: SEYTPCEDRQ RGRRFDRNMM KYRERHCPVK DELLYCLIPP PPNYKIPFKW PQSRDYAWYD NIPHKELSVE KAVQNWIQVE GDRFRFPGGG TMFPRGADAY
201: IDDIARLIPL TDGGIRTAID TGCGVASFGA YLLKRDIMAV SFAPRDTHEA QVQFALERGV PAIIGIMGSR RLPYPARAFD LAHCSRCLIP WFKNDGLYLM
301: EVDRVLRPGG YWILSGPPIN WKQYWRGWER TEEDLKKEQD SIEDVAKSLC WKKVTEKGDL SIWQKPLNHI ECKKLKQNNK SPPICSSDNA DSAWYKDLET
401: CITPLPETNN PDDSAGGALE DWPDRAFAVP PRIIRGTIPE MNAEKFREDN EVWKERIAHY KKIVPELSHG RFRNIMDMNA FLGGFAASML KYPSWVMNVV
501: PVDAEKQTLG VIYERGLIGT YQDWCEGFST YPRTYDMIHA GGLFSLYEHR CDLTLILLEM DRILRPEGTV VLRDNVETLN KVEKIVKGMK WKSQIVDHEK
601: GPFNPEKILV AVKTYWTGQP SDKNNNNNNN NNN
Arabidopsis Description
Probable methyltransferase PMT17 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZX8]
SUBAcon: [mitochondrion,endoplasmic reticulum,nucleus,cytosol]
SUBAcon: [mitochondrion,endoplasmic reticulum,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.