Factsheet for TraesCS4A01G458400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, endoplasmic reticulum

Predictor Summary:

extracellular 3
golgi 4
plasma membrane 3
endoplasmic reticulum 4
vacuole 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G027500.1	Wheat	endoplasmic reticulum, golgi	96.18	96.18
TraesCS7A01G031100.1	Wheat	endoplasmic reticulum, golgi	94.75	94.75
HORVU7Hr1G003860.2	Barley	plasma membrane	91.89	81.64
Os06t0103900-01	Rice	cytosol, golgi, mitochondrion, plastid	80.76	80.51
EER89033	Sorghum	cytosol	78.22	79.35
Zm00001d035876_P002	Maize	cytosol	78.06	79.19
GSMUA_Achr1P11480_001	Banana	cytosol	70.43	71.92
CDX85977	Canola	cytosol	54.69	71.22
CDX93797	Canola	cytosol	53.9	70.19
VIT_02s0025g03200.t01	Wine grape	cytosol	69.95	69.62
KRH60099	Soybean	cytosol	67.09	67.74
KRH41379	Soybean	cytosol	67.73	67.73
Solyc08g013740.2.1	Tomato	unclear	67.73	67.51
PGSC0003DMT400014851	Potato	cytosol	66.77	67.31
Bra037916.1-P	Field mustard	cytosol	63.27	63.68
CDX99539	Canola	cytosol	63.27	63.68
CDX94256	Canola	cytosol	62.64	63.65
CDY70936	Canola	cytosol	18.44	63.39
CDY25257	Canola	cytosol	62.48	63.39
Bra033172.1-P	Field mustard	cytosol	62.48	63.39
AT4G10440.1	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, nucleus	63.75	63.35
CDX84046	Canola	cytosol	61.53	63.24
CDX99540	Canola	cytosol	53.58	62.76
AT1G33170.1	Thale cress	cytosol	63.75	62.75
CDY44966	Canola	cytosol	61.21	62.1
Bra041005.1-P	Field mustard	cytosol	62.64	61.76
TraesCS6A01G021300.1	Wheat	cytosol	61.69	61.49
Bra035476.1-P	Field mustard	cytosol	62.0	60.84
TraesCS2A01G400300.1	Wheat	mitochondrion	58.35	57.89
TraesCS6A01G256000.1	Wheat	mitochondrion	57.55	56.47
TraesCS1A01G213400.1	Wheat	endoplasmic reticulum, golgi	53.74	55.96
TraesCS5A01G226900.1	Wheat	golgi	52.46	53.75
TraesCS5A01G421600.2	Wheat	endoplasmic reticulum	52.46	53.14
TraesCS4A01G163200.1	Wheat	endoplasmic reticulum	50.24	50.16
TraesCS2A01G400900.1	Wheat	golgi, mitochondrion	40.38	44.1
TraesCS3A01G475800.1	Wheat	cytosol	33.07	41.43
TraesCS1A01G198600.1	Wheat	golgi	41.34	41.4
TraesCS3A01G395800.1	Wheat	endoplasmic reticulum	39.9	41.01
TraesCS7A01G444200.1	Wheat	plastid	36.25	37.5
TraesCS1A01G154400.2	Wheat	golgi	36.25	36.25
TraesCS1A01G233500.1	Wheat	endoplasmic reticulum, plasma membrane	32.59	34.17
TraesCS3A01G362600.1	Wheat	golgi	37.04	33.19
TraesCS1A01G297000.1	Wheat	golgi	33.55	31.73
TraesCS3A01G348800.1	Wheat	golgi	33.55	29.76
TraesCS2A01G560300.1	Wheat	mitochondrion, peroxisome, plastid	34.5	29.32
TraesCS3A01G406100.1	Wheat	plastid	37.04	28.84
TraesCS5A01G408700.1	Wheat	mitochondrion	30.21	26.54
TraesCS4A01G220000.1	Wheat	golgi	35.14	24.72
TraesCS7A01G383700.2	Wheat	plastid	31.96	21.92
TraesCS5A01G114100.1	Wheat	endoplasmic reticulum	34.66	20.98

Protein Annotations

EnsemblPlants:TraesCS4A01G458400.1	EnsemblPlantsGene:TraesCS4A01G458400	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	ncoils:Coil
PANTHER:PTHR10108	PANTHER:PTHR10108:SF1058	PFAM:PF03141	SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:723637248..723639957

Molecular Weight (calculated)

71332.5 Da

IEP (calculated)

7.495

GRAVY (calculated)

-0.401

Length

629 amino acids

Sequence
(BLAST)

001: MRHLEFKRMR VTLAIGLVGL CATAYILGAW QGTSSAIKDA PRPVYAKTQC DDAPSHAPSN ASGTTTVASV PSSVARLDFQ AHHRVALNES SLAKEMIPPC
101: QLKYSEYTPC HDPRRARKFP KAMMQYRERH CPTKDKLFRC LVPAPPNYKN PFTWPQSRDY AWYDNIPHRE LSIEKAVQNW IQVEGDRFRF PGGGTMFPHG
201: ADAYIDDIDA LIPLTNGNIR TALDTGCGVA SWGAFLLKRG IITMSFAPRD SHEAQVQFAL ERGVPAMIGV MATDRIPYPA RAFDMAHCSR CLIPWNKLDG
301: LYLVEVDRVL RPGGYWILSG PPIRWKKHYK GWQRTEEDLK QEQDEIEDLA KLLCWKKVVE KDDLAVWQKP INHMECANNR NADEILQFCN SSDVDSAWYK
401: KMETCISPLP EVQTEEEVAG GALEKWPERA SAVPPRITRG SVSGITPEKF EEENKLWAER AGHYKKLIPP LAKGRYRNVM DMNAGTGGFA AALMEYPLWV
501: MNVVPSGSSP DALGVIYERG FIGTFHDWCE AFSTYPRTYD LIHADKVFSF YQDRCDITYI LLEMDRILRP EGTVIFRDTV EMLVKIQAIT GGMRWKSQIM
601: DHESGPFNPE KILVAVKTYW TGEPAQKQQ

Best Arabidopsis Sequence Match ( AT4G10440.1 )
(BLAST)

001: MAKENSGHHH QTEARRKKLT LILGVSGLCI LFYVLGAWQA NTVPSSISKL GCETQSNPSS SSSSSSSSES AELDFKSHNQ IELKETNQTI KYFEPCELSL
101: SEYTPCEDRQ RGRRFDRNMM KYRERHCPVK DELLYCLIPP PPNYKIPFKW PQSRDYAWYD NIPHKELSVE KAVQNWIQVE GDRFRFPGGG TMFPRGADAY
201: IDDIARLIPL TDGGIRTAID TGCGVASFGA YLLKRDIMAV SFAPRDTHEA QVQFALERGV PAIIGIMGSR RLPYPARAFD LAHCSRCLIP WFKNDGLYLM
301: EVDRVLRPGG YWILSGPPIN WKQYWRGWER TEEDLKKEQD SIEDVAKSLC WKKVTEKGDL SIWQKPLNHI ECKKLKQNNK SPPICSSDNA DSAWYKDLET
401: CITPLPETNN PDDSAGGALE DWPDRAFAVP PRIIRGTIPE MNAEKFREDN EVWKERIAHY KKIVPELSHG RFRNIMDMNA FLGGFAASML KYPSWVMNVV
501: PVDAEKQTLG VIYERGLIGT YQDWCEGFST YPRTYDMIHA GGLFSLYEHR CDLTLILLEM DRILRPEGTV VLRDNVETLN KVEKIVKGMK WKSQIVDHEK
601: GPFNPEKILV AVKTYWTGQP SDKNNNNNNN NNN

Arabidopsis Description

Probable methyltransferase PMT17 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZX8]
SUBAcon: [cytosol,nucleus,endoplasmic reticulum,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.