CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
mitochondrion 3
peroxisome 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032476_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, peroxisome	73.0	96.07
Os10t0510400-01	Rice	golgi, plasma membrane	86.66	87.07
TraesCS6B01G029000.1	Wheat	cytosol	81.16	81.93
TraesCS6D01G025000.1	Wheat	cytosol	81.0	81.78
TraesCS6A01G021300.1	Wheat	cytosol	80.85	81.62
GSMUA_Achr9P19890_001	Banana	cytosol	52.75	74.67
GSMUA_Achr4P24710_001	Banana	cytosol	58.24	72.6
GSMUA_Achr4P29040_001	Banana	cytosol, golgi, mitochondrion, peroxisome	68.45	71.83
CDX93797	Canola	cytosol	54.32	71.64
CDX85977	Canola	cytosol	54.16	71.43
HORVU6Hr1G003900.3	Barley	cytosol	81.32	69.72
VIT_02s0025g03200.t01	Wine grape	cytosol	69.07	69.62
KRH41379	Soybean	cytosol	67.66	68.52
PGSC0003DMT400014851	Potato	cytosol	66.72	68.11
KRH60099	Soybean	cytosol	66.41	67.9
GSMUA_Achr1P04180_001	Banana	cytosol	63.89	67.27
Solyc08g013740.2.1	Tomato	unclear	66.56	67.19
CDX84046	Canola	cytosol	63.89	66.5
EER89033	Sorghum	cytosol	64.52	66.29
AT1G33170.1	Thale cress	cytosol	65.62	65.41
CDY44966	Canola	cytosol	63.58	65.32
CDX99540	Canola	cytosol	54.95	65.18
Bra037916.1-P	Field mustard	cytosol	63.74	64.96
AT4G10440.1	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, nucleus	64.36	64.77
Bra041005.1-P	Field mustard	cytosol	64.84	64.73
CDX99539	Canola	cytosol	63.42	64.64
Bra035476.1-P	Field mustard	cytosol	64.68	64.27
CDX94256	Canola	cytosol	62.32	64.14
Bra033172.1-P	Field mustard	cytosol	62.32	64.03
CDY25257	Canola	cytosol	62.32	64.03
CDY70936	Canola	cytosol	17.74	61.75
KXG26943	Sorghum	plastid	59.34	58.97
EES05735	Sorghum	mitochondrion, plastid	58.56	56.01
EER96732	Sorghum	endoplasmic reticulum, golgi	52.75	54.37
KXG38879	Sorghum	mitochondrion	51.18	53.97
EER94782	Sorghum	endoplasmic reticulum, golgi, vacuole	51.02	53.28
EES08791	Sorghum	golgi	50.71	51.19
EER94413	Sorghum	plasma membrane	41.13	42.74
KXG26938	Sorghum	endoplasmic reticulum, golgi, mitochondrion, plastid	38.3	41.64
OQU88046	Sorghum	plastid	38.3	39.35
OQU91634	Sorghum	endoplasmic reticulum, golgi	36.89	38.15
EES11713	Sorghum	plastid	37.05	33.43
EES03874	Sorghum	mitochondrion	35.95	33.28
OQU77908	Sorghum	plasma membrane, plastid	32.34	33.17
EES03991	Sorghum	plastid	38.15	30.72
OQU87776	Sorghum	endoplasmic reticulum, golgi	31.4	29.54
EES08114	Sorghum	golgi, mitochondrion, plastid, vacuole	35.95	25.62
OQU77087	Sorghum	mitochondrion	36.11	24.92
KXG23110	Sorghum	endoplasmic reticulum	35.48	20.77
EER93372	Sorghum	mitochondrion	31.08	15.11

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	EntrezGene:8065861	UniProt:C5WW90	EnsemblPlants:EER93951	ProteinID:EER93951
ProteinID:EER93951.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF990
InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3001G197000	SUPFAM:SSF53335	unigene:Sbi.12732	TMHMM:TMhelix
UniParc:UPI0001A82719	RefSeq:XP_002466953.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:17801601..17806160

Molecular Weight (calculated)

72750.9 Da

IEP (calculated)

7.929

GRAVY (calculated)

-0.509

Length

637 amino acids

Sequence
(BLAST)

001: MAKEYPASPK AQQLQESKKQ RLTYILVVSA LCIAFYVLGA WQNTTLPKPI GNSGITRVGC DPTTASTTQS SGSVPSFGPG SGEVLDFDAH HRLTINNTDG
101: DGELQQFPAC PLNFSEYTPC EDRKRGRRFD RAMLVYRERH CPGKDEQVRC LIPAPPGYRT PFKWPHSRDY AYFNNIPHKE LSIEKAVQNW IQVEGDKFKF
201: PGGGTMFPRG ADAYIDDIDK LISLSDGKIR TAVDTGCGVA SWGAYLLKRN IIAMSFAPRD THEAQVQFAL ERGVPAIIGV MGKHRLPYPS RAFDMAHCSR
301: CLIPWYEHDG LYLAEVDRIL RPGGYWILSG PPINWKTHHV GWERTKDDLK QEQDNIEDIA RSLCWNKVVE KRDLSIWQKP KNHLECANIK KTYKTPHICK
401: SDNPDAAWYR QMEACVTPLP EVSNQGEVAG GAVEKWPERA FLVPPRIRRG MIPGLDAKKF DEDKKLWEKR VAYYKRIIPI AENRYRNVMD MNANMGGFAA
501: SLVKYPVWVM NVVPVNSDRD TLGAIYERGF IGTYQDWCEA FSTYPRTYDL LHADNLFSIY QDRCDITDIL LEMDRILRPE GTAIIRDTVD VLTKVQAITK
601: RMRWESRIMD HEDGPFNPEK VLMAVKTYWT AKTEEEH

Best Arabidopsis Sequence Match ( AT1G33170.1 )
(BLAST)

001: MAKENSSHSL AEAKRKRLTW ILCVSGLCIL SYVLGSWQTN TVPTSSSEAY SRMGCDETST TTRAQTTQTQ TNPSSDDTSS SLSSSEPVEL DFESHHKLEL
101: KITNQTVKYF EPCDMSLSEY TPCEDRERGR RFDRNMMKYR ERHCPSKDEL LYCLIPPPPN YKIPFKWPQS RDYAWYDNIP HKELSIEKAI QNWIQVEGER
201: FRFPGGGTMF PRGADAYIDD IARLIPLTDG AIRTAIDTGC GVASFGAYLL KRDIVAMSFA PRDTHEAQVQ FALERGVPAI IGIMGSRRLP YPARAFDLAH
301: CSRCLIPWFQ NDGLYLTEVD RVLRPGGYWI LSGPPINWKK YWKGWERSQE DLKQEQDSIE DAARSLCWKK VTEKGDLSIW QKPINHVECN KLKRVHKTPP
401: LCSKSDLPDF AWYKDLESCV TPLPEANSSD EFAGGALEDW PNRAFAVPPR IIGGTIPDIN AEKFREDNEV WKERISYYKQ IMPELSRGRF RNIMDMNAYL
501: GGFAAAMMKY PSWVMNVVPV DAEKQTLGVI FERGFIGTYQ DWCEGFSTYP RTYDLIHAGG LFSIYENRCD VTLILLEMDR ILRPEGTVVF RDTVEMLTKI
601: QSITNGMRWK SRILDHERGP FNPEKILLAV KSYWTGPSS

Arabidopsis Description

Probable methyltransferase PMT18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C884]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.