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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 2
  • plastid 1
  • endoplasmic reticulum 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:endoplasmic reticulum, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:endoplasmic reticulum
PProwler:mitochondrion
WoLF PSORT:endoplasmic reticulum
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d041844_P021 Maize golgi, mitochondrion, nucleus, plasma membrane, plastid 83.36 85.89
Os12t0178300-00 Rice cytosol 18.11 74.34
CDY43336 Canola cytosol 12.13 68.75
Bra010830.1-P Field mustard golgi 38.05 60.7
EES11713 Sorghum plastid 39.15 60.34
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 38.05 60.26
HORVU5Hr1G037320.6 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid 51.47 60.09
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 47.52 57.83
CDY31339 Canola plasma membrane 40.53 57.72
CDY39830 Canola plasma membrane 40.81 57.51
CDX84330 Canola endoplasmic reticulum, plasma membrane 37.59 57.36
TraesCS5D01G127100.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 53.03 56.74
TraesCS5B01G120300.1 Wheat endoplasmic reticulum, golgi, mitochondrion, plasma membrane 53.12 56.72
CDX99828 Canola golgi 38.88 56.4
EES03991 Sorghum plastid 40.99 56.38
CDX94669 Canola endoplasmic reticulum 38.69 56.21
CDY44314 Canola endoplasmic reticulum 38.42 56.18
CDY48339 Canola cytosol 38.97 56.08
Bra030140.1-P Field mustard endoplasmic reticulum, golgi, mitochondrion, plastid 38.6 56.0
Bra032319.1-P Field mustard cytosol 38.69 55.91
KRH53915 Soybean endoplasmic reticulum 41.27 55.71
TraesCS5A01G114100.1 Wheat endoplasmic reticulum 53.03 55.53
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 40.53 55.19
KRH64022 Soybean endoplasmic reticulum 41.08 55.19
AT1G29470.1 Thale cress golgi 38.97 55.06
AT5G64030.1 Thale cress endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 41.91 55.01
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 38.33 54.72
Solyc05g056580.2.1 Tomato golgi 40.72 54.49
PGSC0003DMT400059933 Potato golgi 40.72 54.49
Bra005438.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 38.14 54.46
VIT_04s0044g01670.t01 Wine grape cytosol 41.27 54.42
CDY66721 Canola golgi 26.29 54.06
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 41.18 53.91
AT2G34300.3 Thale cress endoplasmic reticulum, golgi, vacuole 37.87 53.51
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 41.18 53.33
KRH40943 Soybean golgi 40.99 52.97
Solyc04g063230.2.1 Tomato cytosol, endoplasmic reticulum, nucleus 36.21 51.3
VIT_18s0001g01270.t01 Wine grape plasma membrane 40.07 49.66
PGSC0003DMT400006139 Potato nucleus 36.21 49.44
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 37.68 49.16
KRH53330 Soybean endoplasmic reticulum 37.32 48.62
Bra024260.1-P Field mustard extracellular, mitochondrion, plasma membrane, vacuole 40.17 46.79
OQU77087 Sorghum mitochondrion 36.95 43.55
OQU91634 Sorghum endoplasmic reticulum, golgi 22.06 38.96
OQU87776 Sorghum endoplasmic reticulum, golgi 23.99 38.55
KXG26938 Sorghum endoplasmic reticulum, golgi, mitochondrion, plastid 20.68 38.4
EES03874 Sorghum mitochondrion 23.81 37.65
EER89033 Sorghum cytosol 20.59 36.13
EER96732 Sorghum endoplasmic reticulum, golgi 20.4 35.92
EES05735 Sorghum mitochondrion, plastid 21.88 35.74
EES08791 Sorghum golgi 20.59 35.5
EER93951 Sorghum peroxisome 20.77 35.48
KXG38879 Sorghum mitochondrion 19.58 35.26
EER94782 Sorghum endoplasmic reticulum, golgi, vacuole 19.76 35.25
OQU77908 Sorghum plasma membrane, plastid 20.04 35.1
KXG26943 Sorghum plastid 20.59 34.95
EER94413 Sorghum plasma membrane 19.58 34.75
OQU88046 Sorghum plastid 18.84 33.06
EER93372 Sorghum mitochondrion 24.91 20.69
Protein Annotations
Gene3D:3.40.50.150MapMan:35.1UniProt:A0A1B6PBG7GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259EnsemblPlants:KXG23110ProteinID:KXG23110ProteinID:KXG23110.1PFAM:PF03141PANTHER:PTHR10108
PANTHER:PTHR10108:SF1062InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesEnsemblPlantsGene:SORBI_3008G057800SUPFAM:SSF53335TMHMM:TMhelix
UniParc:UPI00081AEA39SEG:seg::::
Description
hypothetical protein
Coordinates
chr8:-:6013467..6018006
Molecular Weight (calculated)
116136.0 Da
IEP (calculated)
4.469
GRAVY (calculated)
-0.722
Length
1088 amino acids
Sequence
(BLAST)
0001: MPLFERDRYQ RLDGGGGAGA GAARRPPTSS SFCSSATIVV FVALCLVAAW MMASSNNIAV TVTPENTSSA KDQDGSVDVA QQASDQVADT GRKDGVAGGE
0101: GVDAGGGTQS SEDNGDTGKK DDGSVGEGGG GTQSTEENGD TSSKKDDGSG GDAPQTKEDA GDTGSKDDGS GGDASQTKED ADGDSTGNNK DDGAGAAQTT
0201: EPVTTVGNDD VNQSDVAGRT DATANSTGRG TDAEDSSEPA GGVVAEGDTP SKNQTFSDEN GKSEGGEVAK PEDPDKKVEQ SAEQTAIDGN NTTTTTTTTT
0301: GQDQDEKNAD KKTSEAGGQV DKSEEEASTD DKSTAGQADN TAQEASTTDD NNAGGQAYNS TKETPTESKE TVGGGDDTVK NQTSFDDMNG SMDGAQPVKE
0401: DGKVVAEKNS DETANGDDKV ESTDDDASTG AASKNATSGG QNVAAETMAF AAADDSASGN ITEDSYAAVN SSATTDEEKK PAAGEGDLLP SGQAELLNET
0501: AAAAAAAENA AFPTQAAESS EEKAALAGKN KRKKKQKSKE QGAASGETAA AEEEEETYSH TWKLCNASTG ADYIPCLDNE AAIKKLKSNK HYEHRERHCP
0601: GDAPSCLVPL PEGYRQPIPW PHSRDKIWYH NVPHTMLASY KGHQNWVKVS GEHLTFPGGG TQFKNGALHY IEVIEEGLPE VAWGRRSRVV LDVGCGVASF
0701: GGFMFDKDAL TMSFAPKDEH EAQVQFALER GIPAVSAVMG TKRLPFPGNS YDVVHCARCR VPWHIDGGTL LLEVNRLLRP GGLFVWSATP VYRKVPEDVQ
0801: IWHAMAALTK SMCWEMVKRT SDTVDQTAMV VFKKPTSNEC YDGRTRAEPP LCGDSDDDQD ATWNVTLRPC MHRLPTDASA RGSRWPAQWP ERLTTTPYWL
0901: SADQVGVYGK PAPADFAADQ QHWRKVVDNS YLHGMGIDWK NVRNVMDMRA VYGGFAAALR DMKVWVMNVV TVDSPDTLPI IYERGLFGMY HDWCESFSTY
1001: PRTYDLVHAD HLFSKLKSRC KLLPVIAEVD RMLRPEGKLI VRDDKATVEE VQSMVRSLHW EVRMTVSKQG QGLLCVRKTM WRPTEVEA
Best Arabidopsis Sequence Match ( AT5G64030.1 )
(BLAST)
001: MAQPRYTRID NRRPSSNYCS TVTVVVFVAL CLVGIWMMTS SSVGPAQNVD EVSLDNKDGI KKQMTPPAEE GNGQKFEDAP VETPNEDKKG DGDASLPKED
101: ESSSKQDNQE EKKEEKTKEE FTPSSETKSE TEGGEDQKDD SKSENGGGGD LDEKKDLKDN SDEENPDTNE KQTKPETEDN ELGEDGENQK QFESDNGEKK
201: SIDDDKKSSD DDKENKTGNE DTETKTEKEN TETNVDVQVE QEGQSKNETS GDLSPPGAQL ELLNETTAQN GSFSTQATES KNEKEAQKGS GDKLDYKWAL
301: CNTTAGPDYI PCLDNVQAIR SLPSTKHYEH RERHCPDSPP TCLVPLPDGY KRPIEWPKSR EKIWYTNVPH TKLAEYKGHQ NWVKVTGEYL TFPGGGTQFK
401: HGALHYIDFI QESVPAIAWG KRSRVVLDVG CGVASFGGFL FDRDVITMSL APKDEHEAQV QFALERGIPA ISAVMGTTRL PFPGRVFDIV HCARCRVPWH
501: IEGGKLLLEL NRVLRPGGFF VWSATPVYQK KTEDVEIWKA MSELIKKMCW ELVSINKDTI NGVGVATYRK PTSNECYKNR SEPVPPICAD SDDPNASWKV
601: PLQACMHTAP EDKTQRGSQW PEQWPARLEK APFWLSSSQT GVYGKAAPED FSADYEHWKR VVTKSYLNGL GINWASVRNV MDMRAVYGGF AAALRDLKVW
701: VMNVVPIDSP DTLAIIYERG LFGIYHDWCE SFSTYPRSYD LLHADHLFSK LKQRCNLTAV IAEVDRVLRP EGKLIVRDDA ETIQQVEGMV KAMKWEVRMT
801: YSKEKEGLLS VQKSIWRPSE VETLTYAIG
Arabidopsis Description
Probable methyltransferase PMT26 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7V3]
SUBAcon: [mitochondrion,endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.