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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • endoplasmic reticulum 2
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • vacuole 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
 endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 93.65 93.77
CDY43336 Canola cytosol 16.17 70.31
GSMUA_Achr8P32550_001 Banana cytosol, endoplasmic reticulum, golgi, mitochondrion 50.66 63.23
Bra010830.1-P Field mustard golgi 50.9 62.32
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 51.02 62.01
Os12t0178300-00 Rice cytosol 19.28 60.75
Zm00001d002943_P002 Maize plasma membrane 48.26 60.06
CDX84330 Canola endoplasmic reticulum, plasma membrane 51.14 59.89
GSMUA_Achr7P23260_001 Banana cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 52.34 59.86
CDY44314 Canola endoplasmic reticulum 52.81 59.27
KRH53915 Soybean endoplasmic reticulum 57.13 59.18
Os04t0692400-01 Rice mitochondrion, peroxisome 47.9 59.08
KRH64022 Soybean endoplasmic reticulum 57.25 59.01
Bra030140.1-P Field mustard endoplasmic reticulum, golgi, mitochondrion, plastid 52.81 58.8
CDX99828 Canola golgi 52.69 58.67
CDX94669 Canola endoplasmic reticulum 52.57 58.61
CDY48339 Canola cytosol 52.81 58.33
TraesCS2D01G569900.1 Wheat plastid 49.1 58.32
Bra032319.1-P Field mustard cytosol 52.46 58.17
EES11713 Sorghum plastid 49.1 58.07
Solyc04g063230.2.1 Tomato cytosol, endoplasmic reticulum, nucleus 53.41 58.07
TraesCSU01G022400.1 Wheat plastid 48.98 58.01
AT1G29470.1 Thale cress golgi 53.29 57.79
VIT_18s0001g01270.t01 Wine grape plasma membrane 60.12 57.18
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 51.98 56.96
AT2G34300.3 Thale cress endoplasmic reticulum, golgi, vacuole 52.34 56.75
Bra005438.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 51.74 56.69
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 56.29 56.56
KRH40943 Soybean golgi 56.65 56.18
CDY66721 Canola golgi 35.45 55.95
PGSC0003DMT400006139 Potato nucleus 52.93 55.46
GSMUA_Achr8P30140_001 Banana nucleus 52.34 55.46
TraesCS2A01G560300.1 Wheat mitochondrion, peroxisome, plastid 48.5 54.73
TraesCS3B01G439800.3 Wheat cytosol, golgi, mitochondrion, plastid, vacuole 52.46 54.55
Os01t0883900-02 Rice golgi, mitochondrion, plasma membrane, vacuole 52.46 54.34
TraesCS3D01G401300.2 Wheat golgi 52.22 54.3
TraesCS3A01G406100.1 Wheat plastid 52.46 54.21
HORVU3Hr1G090970.1 Barley cytosol, golgi, mitochondrion, plastid, vacuole 52.34 54.08
EES03991 Sorghum plastid 51.14 53.98
Zm00001d012211_P008 Maize plastid 51.14 53.91
HORVU2Hr1G127220.1 Barley cytosol 48.98 52.64
KRH28732 Soybean endoplasmic reticulum 48.26 52.47
GSMUA_Achr11P... Banana mitochondrion 52.1 52.22
KRH73268 Soybean endoplasmic reticulum 36.17 50.76
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 48.38 50.75
GSMUA_Achr8P08230_001 Banana cytosol, endoplasmic reticulum, golgi, mitochondrion 53.29 50.74
KRH31179 Soybean plasma membrane 35.33 49.66
KRH14916 Soybean nucleus 35.21 49.41
KRG97692 Soybean plastid 22.63 48.96
KRH69842 Soybean mitochondrion 46.47 46.97
Os11t0186300-01 Rice plasma membrane 48.74 46.94
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 48.26 45.08
HORVU4Hr1G017470.1 Barley vacuole 48.02 44.96
Zm00001d004720_P001 Maize golgi 48.74 44.92
TraesCS4A01G220000.1 Wheat golgi 47.54 44.41
TraesCS4D01G094600.1 Wheat endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole 47.43 44.34
TraesCS4B01G098500.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole 47.31 44.08
HORVU5Hr1G037320.6 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid 47.19 42.27
KRH05816 Soybean endoplasmic reticulum 33.89 40.49
KRH00647 Soybean cytosol 26.11 40.45
KRG97843 Soybean endoplasmic reticulum 32.1 40.42
KRH32196 Soybean golgi 28.62 40.37
KRH19571 Soybean golgi 28.5 40.13
KRH15210 Soybean mitochondrion 34.01 39.94
KRH31030 Soybean endoplasmic reticulum, plasma membrane 31.98 39.85
KRH34393 Soybean endoplasmic reticulum 29.46 39.61
KRG95687 Soybean cytosol, golgi, plasma membrane, plastid 29.58 39.58
KRG92410 Soybean endoplasmic reticulum, golgi 29.34 39.52
Zm00001d041844_P021 Maize golgi, mitochondrion, nucleus, plasma membrane, plastid 49.82 39.39
KRH69085 Soybean endoplasmic reticulum, golgi 29.34 39.2
KRH31698 Soybean endoplasmic reticulum 29.22 39.04
KRH67404 Soybean endoplasmic reticulum, golgi, plasma membrane 29.7 38.99
TraesCS5B01G120300.1 Wheat endoplasmic reticulum, golgi, mitochondrion, plasma membrane 47.54 38.96
TraesCS5D01G127100.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 47.43 38.94
KRH73069 Soybean endoplasmic reticulum 30.3 38.45
KRH15065 Soybean nucleus 30.54 38.4
TraesCS5A01G114100.1 Wheat endoplasmic reticulum 47.78 38.4
KRG91450 Soybean mitochondrion 27.43 38.17
KRH16455 Soybean endoplasmic reticulum, golgi 29.94 37.88
KRH18054 Soybean endoplasmic reticulum, golgi 30.06 37.86
KRH57576 Soybean endoplasmic reticulum 27.78 37.85
KRH40535 Soybean plastid 26.95 37.69
KRH00643 Soybean endoplasmic reticulum, mitochondrion 26.71 37.42
KXG23110 Sorghum endoplasmic reticulum 48.62 37.32
KRH70718 Soybean endoplasmic reticulum 27.07 37.23
KRH74853 Soybean endoplasmic reticulum, golgi 27.07 37.23
KRH04297 Soybean endoplasmic reticulum 27.31 37.19
KRH39668 Soybean endoplasmic reticulum 26.59 37.19
KRH76381 Soybean cytosol, golgi, plasma membrane 26.59 37.19
KRG99086 Soybean endoplasmic reticulum 27.07 37.17
KRH48238 Soybean endoplasmic reticulum 26.23 36.87
KRH45909 Soybean endoplasmic reticulum 26.83 36.84
KRH65147 Soybean endoplasmic reticulum 26.23 36.68
KRH72067 Soybean plastid 26.47 36.65
KRH07708 Soybean cytosol 26.11 36.45
KRH41379 Soybean cytosol 27.43 36.41
KRH07206 Soybean cytosol, golgi, plasma membrane 25.99 36.29
KRH60099 Soybean cytosol 27.07 36.28
KRH09116 Soybean endoplasmic reticulum 27.31 36.08
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 26.83 36.01
KRH63351 Soybean endoplasmic reticulum 26.11 35.97
KRH07208 Soybean cytosol 25.99 35.93
KRH33118 Soybean extracellular, golgi, plastid 25.87 35.64
KRH48242 Soybean endoplasmic reticulum 27.31 35.57
KRH38569 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 26.95 35.55
KRH54546 Soybean golgi 24.07 34.78
KRH01812 Soybean extracellular, plasma membrane, vacuole 23.83 34.61
KRH46879 Soybean endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 23.95 31.75
Protein Annotations
EntrezGene:100798553Gene3D:3.40.50.150MapMan:35.1EMBL:ACUP02003459ncoils:CoilEnsemblPlantsGene:GLYMA_06G119400
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0032259UniProt:I1KAG4EnsemblPlants:KRH53330ProteinID:KRH53330ProteinID:KRH53330.1
ProteinID:KRH53331.1PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF1056InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTases
SUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI000233947CSEG:seg::
Description
hypothetical protein
Coordinates
chr6:-:9719172..9726230
Molecular Weight (calculated)
93703.6 Da
IEP (calculated)
4.912
GRAVY (calculated)
-0.571
Length
835 amino acids
Sequence
(BLAST)
001: MALGKNSQGK GRKLSNYCST VSVAVFVAFC LVGVWIVLSS IVPIQNSVIQ VSETETINDD VKNVASDSKQ FEDRSGDISE DSTRGSSQTK KSQSGDSHPE
101: NQDDQKGIEK VSDNTAEENQ EVVGDNSDEK NDLEKGLENT IEENDQMRNV KPSTDETEKE SDRSLNSESE ETETSNDQIH DDELRGSMET LDEKESDKST
201: NDNKLGTEKS MDEATQQDEM VGETAEDKKH LHSEATQSTG GSNTESHENN PASKEILVTG TSSEILIETS TENGTWSTQA AESQHEKESQ KSLVSIDSRT
301: YDWKLCNTTT GSEYIPCLDN WKAIRKLQSI SHYEHRERHC PDEATTCLVS LPEGYRSPIR WPKSREMIWY KNAPHTKLVV DKGHQNWVKV TGEYLTFPGG
401: GTQFKHGALN YIEFIQKSLP KIAWGKRSRV ILDVGCGVAS FGGYLFEKDV LTMSFAPKDV HEAQVQFALE RGIPATLGVM GTVRLPYPGS VFDLLHCARC
501: RVPWHVEGGK LLLELNRVLR PGGYFVWSAT PVYQKDPEDV EIWKAMGEIT KSMCWDLVVI AKDKLNGVAA AIYRKPTDNE CYNNRIKNEP SMCSESDDPN
601: TAWNVSLQAC MHKVPVDASE RGSIWPEQWP LRLEKPPYWI DSQAGVYGRA ASVEFTADYK HWKNVISHLY LNGMGINWSS VRNVMDMKAV YGGFAAALRA
701: LKLNVWVMNV VPIDSPDTLP IIYERGLFGI YHDWCESFNT YPRSYDLLHA DSIFSTLKEK CNKVAVIAEV DRILRPEGYL VIRDNVETIG EIESLAKSLQ
801: WDIRLTYSKN GEGLLCIQKT FWRPTKVETV ASAIA
Best Arabidopsis Sequence Match ( AT1G29470.2 )
(BLAST)
001: MAMGKYSRVD GKKSSGYGLT ITIVLIVSLC LVGAWMFMSS WSAPTESIDF SANERTKDVD TTKSDFKSEE VDRGSKSFPD EKNEETEVVT ETNEEKTDPE
101: KSGEENSGEK TESAEERKEF DDKNGDGDRK NGDGEKDTES ESDETKQKEK TQLEESSEEN KSEDSNGTEE NAGESEENTE KKSEENAGET EESTEKSKDV
201: FPAGDQAEIT KESSTGSGAW STQLVESQNE KKAQVSSIKW KVCNVTAGPD YIPCLDNWQA IRKLHSTKHY EHRERHCPEE SPRCLVSLPE GYKRSIKWPK
301: SREKIWYTNI PHTKLAEVKG HQNWVKMSGE YLTFPGGGTQ FKNGALHYID FLQESYPDIA WGNRTRVILD VGCGVASFGG YLFDRDVLAL SFAPKDEHEA
401: QVQFALERGI PAMSNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKTEEDVGIW KAMSKLTKAM CWELMTIKKD
501: ELNEVGAAIY QKPMSNKCYN ERSQNEPPLC KDSDDQNAAW NVPLEACIHK VTEDSSKRGA VWPESWPERV ETVPQWLDSQ EGVYGKPAQE DFTADHERWK
601: TIVSKSYLNG MGIDWSYVRN VMDMRAVYGG FAAALKDLKL WVMNVVPIDS PDTLPIIYER GLFGIYHDWC ESFSTYPRTY DLLHADHLFS SLKKRCNLVG
701: VMAEVDRILR PQGTFIVRDD METIGEIEKM VKSMKWNVRM THSKDGEGLL SVQKSWWRPT EAETIQSAIA
Arabidopsis Description
Probable methyltransferase PMT24 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.