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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • golgi 4
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:mitochondrion
 endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG92410 Soybean endoplasmic reticulum, golgi 95.81 95.97
KRH31698 Soybean endoplasmic reticulum 86.8 86.24
KRH69085 Soybean endoplasmic reticulum, golgi 86.47 85.92
VIT_05s0049g01180.t01 Wine grape endoplasmic reticulum, golgi 82.13 83.33
Solyc09g090190.2.1 Tomato nucleus 80.84 81.23
PGSC0003DMT400044353 Potato endoplasmic reticulum, golgi 80.52 80.91
PGSC0003DMT400034882 Potato cytosol, endoplasmic reticulum, golgi, mitochondrion 80.35 80.61
Solyc03g005600.2.1 Tomato nucleus, unclear 80.35 80.48
AT4G14360.2 Thale cress endoplasmic reticulum, golgi 77.13 78.78
GSMUA_Achr6P36560_001 Banana endoplasmic reticulum, golgi, vacuole 77.46 77.58
AT3G23300.1 Thale cress endoplasmic reticulum, golgi, vacuole 76.17 77.41
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 76.01 77.25
GSMUA_Achr1P20520_001 Banana endoplasmic reticulum, golgi, vacuole 77.13 77.13
CDX94861 Canola endoplasmic reticulum, golgi 74.88 77.11
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 76.01 77.0
Bra014936.1-P Field mustard endoplasmic reticulum, golgi, vacuole 75.85 76.84
CDX92981 Canola endoplasmic reticulum, golgi 74.88 76.73
Bra001909.1-P Field mustard endoplasmic reticulum, golgi 74.88 76.73
GSMUA_Achr5P21350_001 Banana endoplasmic reticulum 75.2 75.2
KRH32196 Soybean golgi 71.18 74.66
KRH19571 Soybean golgi 71.01 74.37
Zm00001d032703_P006 Maize endoplasmic reticulum, golgi, vacuole 71.5 72.91
OQU91634 Sorghum endoplasmic reticulum, golgi 71.98 72.56
Os10t0477100-01 Rice golgi 71.66 72.12
TraesCS1D01G153300.1 Wheat endoplasmic reticulum, golgi 71.01 71.59
KRG95687 Soybean cytosol, golgi, plasma membrane, plastid 71.82 71.47
TraesCS1B01G170600.2 Wheat endoplasmic reticulum, golgi 70.85 71.43
KRH67404 Soybean endoplasmic reticulum, golgi, plasma membrane 72.79 71.07
TraesCS1A01G154400.2 Wheat golgi 69.4 68.52
Zm00001d014036_P002 Maize endoplasmic reticulum 71.34 67.74
KRH00647 Soybean cytosol 37.36 43.04
KRH72067 Soybean plastid 41.06 42.29
KRH33118 Soybean extracellular, golgi, plastid 41.22 42.24
KRG97692 Soybean plastid 25.28 40.67
KRH73268 Soybean endoplasmic reticulum 37.52 39.16
KRH73069 Soybean endoplasmic reticulum 41.38 39.06
KRH15065 Soybean nucleus 41.71 39.01
KRH01812 Soybean extracellular, plasma membrane, vacuole 36.07 38.96
KRH60099 Soybean cytosol 38.97 38.84
KRH14916 Soybean nucleus 37.2 38.82
KRH45909 Soybean endoplasmic reticulum 37.84 38.65
KRH31179 Soybean plasma membrane 36.88 38.55
KRH41379 Soybean cytosol 38.97 38.47
KRG97843 Soybean endoplasmic reticulum 41.06 38.46
KRH63351 Soybean endoplasmic reticulum 37.36 38.28
KRG99086 Soybean endoplasmic reticulum 37.36 38.16
KRH31030 Soybean endoplasmic reticulum, plasma membrane 41.06 38.06
KRG91450 Soybean mitochondrion 36.72 38.0
KRH16455 Soybean endoplasmic reticulum, golgi 40.1 37.73
KRH74853 Soybean endoplasmic reticulum, golgi 36.72 37.56
KRH48238 Soybean endoplasmic reticulum 35.91 37.54
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 37.52 37.46
KRH70718 Soybean endoplasmic reticulum 36.39 37.23
KRH76381 Soybean cytosol, golgi, plasma membrane 35.75 37.19
KRH18054 Soybean endoplasmic reticulum, golgi 39.61 37.1
KRH48242 Soybean endoplasmic reticulum 38.16 36.97
KRH57576 Soybean endoplasmic reticulum 36.39 36.87
KRH04297 Soybean endoplasmic reticulum 36.39 36.87
KRH65147 Soybean endoplasmic reticulum 35.43 36.85
KRH07708 Soybean cytosol 35.43 36.79
KRH39668 Soybean endoplasmic reticulum 35.27 36.68
KRH07206 Soybean cytosol, golgi, plasma membrane 35.27 36.62
KRH46879 Soybean endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 37.04 36.51
KRH54546 Soybean golgi 33.98 36.51
KRH07208 Soybean cytosol 35.43 36.42
KRH09116 Soybean endoplasmic reticulum 37.04 36.39
KRH38569 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 37.04 36.33
KRH00643 Soybean endoplasmic reticulum, mitochondrion 34.78 36.24
KRH40535 Soybean plastid 34.78 36.18
KRH28732 Soybean endoplasmic reticulum 38.81 31.38
KRH53915 Soybean endoplasmic reticulum 40.58 31.27
KRH64022 Soybean endoplasmic reticulum 40.26 30.86
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 39.29 30.65
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 40.58 30.32
KRH69842 Soybean mitochondrion 39.77 29.9
KRH40943 Soybean golgi 40.26 29.69
KRH53330 Soybean endoplasmic reticulum 39.61 29.46
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 39.29 29.26
KRH05816 Soybean endoplasmic reticulum 32.21 28.61
KRH15210 Soybean mitochondrion 32.37 28.27
Protein Annotations
EntrezGene:102669038Gene3D:3.40.50.150MapMan:35.1EMBL:ACUP02006596EnsemblPlantsGene:GLYMA_10G181400GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259UniProt:K7LK48EnsemblPlants:KRH34393ProteinID:KRH34393ProteinID:KRH34393.1PFAM:PF03141
PANTHER:PTHR10108PANTHER:PTHR10108:SF704InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelix
UniParc:UPI00023CDB9FSEG:seg::::
Description
hypothetical protein
Coordinates
chr10:+:41487272..41492543
Molecular Weight (calculated)
70525.7 Da
IEP (calculated)
6.609
GRAVY (calculated)
-0.487
Length
621 amino acids
Sequence
(BLAST)
001: MSRGRSDGSQ KKRLVASICV VATFLGFLYV YGGSIFGSQN SGSSTLEYGR SLKRLGSSYL GAEDDTDGKQ DESSSSFRQG DGEDNIVPKS FPVCDDRHSE
101: LIPCLDRHLI YQMRMKLDLS VMEHYERHCP PAERRYNCLI PPPSGYKVPI KWPQSRDEVW KANIPHTHLA HEKSDQNWMV VKGEKIVFPG GGTHFHYGAD
201: KYIASIANML NFSNNNLNNE GRLRTVLDVG CGVASFGAYL LSSDIIAMSL APNDVHQNQI QFALERGIPA YLGVLGTKRL PYPSRSFEFA HCSRCRIDWL
301: QRDGLLLLEL DRLLRPGGYF AYSSPEAYAQ DEEDLRIWKE MSDLVGRMCW KVAAKRNQTV VWQKPPTNDC YMEREPGTRP PLCQSDDDSD AVWGVNMKAC
401: ITPYSDHDNR AKGSGLAPWP ARLTSPPPRL ADFGYSNDMF EKDTELWQRR VEKYWDLLSP KITSNTLRNI MDMKANMGSF AAALRDKKVW VMNVVPQDGP
501: NTLKLIYDRG LIGTTHDWCE AFSTYPRTYD LLHAWTVFSD IENKGCSKED LLIEMDRMLR PTGFAIIRDK QSVIDFIKNH LSALHWEAID SSSNSVQDGD
601: EVVLIIQKKM WLTSESFRDT E
Best Arabidopsis Sequence Match ( AT1G04430.1 )
(BLAST)
001: MMRGRSDGGL KKRLIASVCV VALFVCFLFM YYGSSSQGAS ALEYGRSLRK LGSSYLSGDD DNGDTKQDDS VANAEDSLVV AKSFPVCDDR HSEIIPCLDR
101: NFIYQMRLKL DLSLMEHYER HCPPPERRFN CLIPPPSGYK VPIKWPKSRD EVWKANIPHT HLAKEKSDQN WMVEKGEKIS FPGGGTHFHY GADKYIASIA
201: NMLNFSNDVL NDEGRLRTVL DVGCGVASFG AYLLASDIMT MSLAPNDVHQ NQIQFALERG IPAYLGVLGT KRLPYPSRSF EFAHCSRCRI DWLQRDGLLL
301: LELDRVLRPG GYFAYSSPEA YAQDEENLKI WKEMSALVER MCWRIAVKRN QTVVWQKPLS NDCYLEREPG TQPPLCRSDA DPDAVAGVSM EACITPYSKH
401: DHKTKGSGLA PWPARLTSSP PRLADFGYST DMFEKDTELW KQQVDSYWNL MSSKVKSNTV RNIMDMKAHM GSFAAALKDK DVWVMNVVSP DGPNTLKLIY
501: DRGLIGTNHN WCEAFSTYPR TYDLLHAWSI FSDIKSKGCS AEDLLIEMDR ILRPTGFVII RDKQSVVESI KKYLQALHWE TVASEKVNTS SELDQDSEDG
601: ENNVVFIVQK KLWLTSESLR DSE
Arabidopsis Description
Probable methyltransferase PMT8 [Source:UniProtKB/Swiss-Prot;Acc:Q940J9]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.