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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:golgi
 nucleus: 21132161
endoplasmic reticulum: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH65147 Soybean endoplasmic reticulum 95.45 94.97
KRH00643 Soybean endoplasmic reticulum, mitochondrion 84.18 83.89
KRH40535 Soybean plastid 84.18 83.75
VIT_15s0048g01990.t01 Wine grape mitochondrion 78.79 78.39
Solyc01g091640.2.1 Tomato nucleus 78.79 78.13
PGSC0003DMT400071375 Potato mitochondrion 78.62 77.96
AT4G00740.1 Thale cress golgi 76.94 76.17
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 76.43 76.05
Bra000959.1-P Field mustard plastid 76.09 75.71
CDX74348 Canola plastid 75.76 75.38
CDY07198 Canola mitochondrion 74.75 74.12
CDY51142 Canola cytosol 73.57 70.83
GSMUA_Achr5P20080_001 Banana mitochondrion 70.71 69.65
GSMUA_Achr11P... Banana golgi, mitochondrion 68.35 67.67
TraesCS2A01G400900.1 Wheat golgi, mitochondrion 64.31 66.32
TraesCS2B01G419000.1 Wheat golgi, plastid 64.31 66.09
TraesCS2D01G398400.1 Wheat golgi, mitochondrion, plastid 64.14 65.8
HORVU6Hr1G056160.1 Barley cytosol 51.35 65.73
Os04t0569400-00 Rice golgi, mitochondrion 64.14 65.02
KXG26938 Sorghum endoplasmic reticulum, golgi, mitochondrion, plastid 63.8 64.68
HORVU2Hr1G095160.7 Barley plastid 64.31 63.77
Zm00001d002631_P003 Maize endoplasmic reticulum, golgi, mitochondrion, plastid 63.47 63.47
Bra037356.1-P Field mustard mitochondrion 73.74 63.29
KRH00647 Soybean cytosol 40.24 44.34
KRG91450 Soybean mitochondrion 42.42 42.0
KRH70718 Soybean endoplasmic reticulum 42.42 41.52
KRH74853 Soybean endoplasmic reticulum, golgi 41.92 41.02
KRH45909 Soybean endoplasmic reticulum 41.41 40.46
KRG99086 Soybean endoplasmic reticulum 41.25 40.3
KRH01812 Soybean extracellular, plasma membrane, vacuole 38.72 40.0
KRH04297 Soybean endoplasmic reticulum 41.25 39.97
KRH57576 Soybean endoplasmic reticulum 40.91 39.64
KRH39668 Soybean endoplasmic reticulum 39.73 39.53
KRH63351 Soybean endoplasmic reticulum 40.07 39.27
KRH07206 Soybean cytosol, golgi, plasma membrane 39.39 39.13
KRH09116 Soybean endoplasmic reticulum 41.58 39.08
KRH60099 Soybean cytosol 40.91 39.0
KRH07708 Soybean cytosol 39.23 38.96
KRH41379 Soybean cytosol 41.25 38.95
KRH76381 Soybean cytosol, golgi, plasma membrane 39.06 38.86
KRG97692 Soybean plastid 25.25 38.86
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 40.57 38.75
KRH07208 Soybean cytosol 39.06 38.41
KRH38569 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 40.91 38.39
KRH48242 Soybean endoplasmic reticulum 41.08 38.07
KRH73268 Soybean endoplasmic reticulum 37.71 37.65
KRH54546 Soybean golgi 36.53 37.54
KRH14916 Soybean nucleus 37.54 37.48
KRH31179 Soybean plasma membrane 37.37 37.37
KRH46879 Soybean endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 38.72 36.51
KRH31698 Soybean endoplasmic reticulum 38.22 36.32
KRH19571 Soybean golgi 36.2 36.26
KRH32196 Soybean golgi 35.86 35.98
KRH34393 Soybean endoplasmic reticulum 37.54 35.91
KRH69085 Soybean endoplasmic reticulum, golgi 37.54 35.68
KRG92410 Soybean endoplasmic reticulum, golgi 37.04 35.48
KRH72067 Soybean plastid 35.02 34.49
KRG95687 Soybean cytosol, golgi, plasma membrane, plastid 36.2 34.46
KRH33118 Soybean extracellular, golgi, plastid 34.68 33.99
KRH67404 Soybean endoplasmic reticulum, golgi, plasma membrane 36.36 33.96
KRH73069 Soybean endoplasmic reticulum 36.87 33.28
KRH15065 Soybean nucleus 37.04 33.13
KRH16455 Soybean endoplasmic reticulum, golgi 36.7 33.03
KRH18054 Soybean endoplasmic reticulum, golgi 36.2 32.43
KRG97843 Soybean endoplasmic reticulum 35.52 31.82
KRH31030 Soybean endoplasmic reticulum, plasma membrane 35.52 31.49
KRH53915 Soybean endoplasmic reticulum 38.22 28.16
KRH64022 Soybean endoplasmic reticulum 38.38 28.15
KRH28732 Soybean endoplasmic reticulum 36.2 27.99
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 36.87 27.51
KRH69842 Soybean mitochondrion 36.87 26.51
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 37.04 26.47
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 37.04 26.38
KRH53330 Soybean endoplasmic reticulum 36.87 26.23
KRH40943 Soybean golgi 37.04 26.13
KRH05816 Soybean endoplasmic reticulum 30.47 25.89
KRH15210 Soybean mitochondrion 30.13 25.18
Protein Annotations
EntrezGene:100812418MapMan:21.3.1.1.2Gene3D:3.40.50.150EMBL:ACUP02004214EnsemblPlantsGene:GLYMA_07G077000GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259UniProt:I1KIH2EnsemblPlants:KRH48238ProteinID:KRH48238ProteinID:KRH48238.1PFAM:PF03141
PANTHER:PTHR10108PANTHER:PTHR10108:SF763InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelix
UniParc:UPI0002338355SEG:seg::::
Description
hypothetical protein
Coordinates
chr7:-:7019591..7025311
Molecular Weight (calculated)
66742.8 Da
IEP (calculated)
8.758
GRAVY (calculated)
-0.174
Length
594 amino acids
Sequence
(BLAST)
001: MPHLNLPASK RVRQWRVLDL ISAAFFGLVF LFFMLVFTPA GDSLAASGRQ TLLLSASADP RQRLHVAAAI EAGQQSRVID ACPADTAADH MPCEDPRLNS
101: QLSREMNYYR ERHCPPLETS PLCLVPPPKG YKVPVQWPES LHKIWHSNMP YNKIADRKGH QGWMKLDGPH FIFPGGGTMF PDGAEQYIEK LGQYIPMNGG
201: ILRTALDMGC GVASFGGYLL AQNILTMSFA PRDSHKSQIQ FALERGVPAF VAMLGTRRLP FPAFGFDLVH CSRCLIPFTA YNASYFIEVD RLLRPGGYLV
301: ISGPPVQWPK QDKEWSDLQA VARALCYELI AVDGNTVIWK KPAVEMCLPN QNEFGLDLCD DSDDPSFAWY FKLKKCITRM SSVKGEYAIG TIPKWPERLT
401: ASPPRSTVLK NGADVYEADT KRWVRRVAHY KNSLKIKLGT PAVRNVMDMN AFFGGFAAAL NSDPVWVMNV VPSHKPITLD AIFDRGLIGV YHDWCEPFST
501: YPRTYDLIHA TSIESLIKDP ASGRNRCSLL DLMVELDRIL RPEGTVVVRD TPEVIEKVAR VVRAVRWKPT IYNKEPESHG REKILVATKT FWKS
Best Arabidopsis Sequence Match ( AT4G00740.2 )
(BLAST)
001: MGHVNLPASK RGNPRQWRLL DIVTAAFFGI VLLFFILLFT PLGDSMAASG RQTLLLSTAS DPRQRQRLVT LVEAGQHLQP IEYCPAEAVA HMPCEDPRRN
101: SQLSREMNFY RERHCPLPEE TPLCLIPPPS GYKIPVPWPE SLHKIWHANM PYNKIADRKG HQGWMKREGE YFTFPGGGTM FPGGAGQYIE KLAQYIPLNG
201: GTLRTALDMG CGVASFGGTL LSQGILALSF APRDSHKSQI QFALERGVPA FVAMLGTRRL PFPAYSFDLM HCSRCLIPFT AYNATYFIEV DRLLRPGGYL
301: VISGPPVQWP KQDKEWADLQ AVARALCYEL IAVDGNTVIW KKPVGDSCLP SQNEFGLELC DESVPPSDAW YFKLKRCVTR PSSVKGEHAL GTISKWPERL
401: TKVPSRAIVM KNGLDVFEAD ARRWARRVAY YRDSLNLKLK SPTVRNVMDM NAFFGGFAAT LASDPVWVMN VIPARKPLTL DVIYDRGLIG VYHDWCEPFS
501: TYPRTYDFIH VSGIESLIKR QDSSKSRCSL VDLMVEMDRI LRPEGKVVIR DSPEVLDKVA RMAHAVRWSS SIHEKEPESH GREKILIATK SLWKLPSNSH
Arabidopsis Description
Probable methyltransferase PMT13 [Source:UniProtKB/Swiss-Prot;Acc:Q93W95]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.