CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plastid

Predictor Summary:

plastid 3
endoplasmic reticulum 1
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002631_P003	Maize	endoplasmic reticulum, golgi, mitochondrion, plastid	94.2	92.93
Os04t0569400-00	Rice	golgi, mitochondrion	86.35	86.35
TraesCS2D01G398400.1	Wheat	golgi, mitochondrion, plastid	85.15	86.18
TraesCS2B01G419000.1	Wheat	golgi, plastid	84.81	85.99
TraesCS2A01G400900.1	Wheat	golgi, mitochondrion	84.47	85.94
HORVU2Hr1G095160.7	Barley	plastid	85.67	83.81
HORVU6Hr1G056160.1	Barley	cytosol	61.95	78.23
GSMUA_Achr5P20080_001	Banana	mitochondrion	70.82	68.82
GSMUA_Achr11P...	Banana	golgi, mitochondrion	70.14	68.5
Solyc01g091640.2.1	Tomato	nucleus	67.24	65.78
PGSC0003DMT400071375	Potato	mitochondrion	67.24	65.78
VIT_15s0048g01990.t01	Wine grape	mitochondrion	66.55	65.33
KRH40535	Soybean	plastid	65.36	64.15
KRH00643	Soybean	endoplasmic reticulum, mitochondrion	65.02	63.93
KRH48238	Soybean	endoplasmic reticulum	64.68	63.8
KRH65147	Soybean	endoplasmic reticulum	64.68	63.48
CDX91893	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	63.82	62.65
Bra000959.1-P	Field mustard	plastid	63.65	62.48
AT4G00740.1	Thale cress	golgi	63.82	62.33
CDX74348	Canola	plastid	63.31	62.14
CDY07198	Canola	mitochondrion	62.29	60.93
CDY51142	Canola	cytosol	61.6	58.51
Bra037356.1-P	Field mustard	mitochondrion	61.77	52.31
EER89033	Sorghum	cytosol	44.37	41.94
KXG38879	Sorghum	mitochondrion	42.15	40.89
KXG26943	Sorghum	plastid	44.71	40.87
EER94413	Sorghum	plasma membrane	42.32	40.46
EER96732	Sorghum	endoplasmic reticulum, golgi	42.49	40.29
EER94782	Sorghum	endoplasmic reticulum, golgi, vacuole	41.64	40.0
EES08791	Sorghum	golgi	42.83	39.78
EES05735	Sorghum	mitochondrion, plastid	43.86	38.59
EER93951	Sorghum	peroxisome	41.64	38.3
OQU91634	Sorghum	endoplasmic reticulum, golgi	37.03	35.23
OQU77908	Sorghum	plasma membrane, plastid	37.2	35.1
OQU88046	Sorghum	plastid	36.35	34.35
EES11713	Sorghum	plastid	38.57	32.01
EES03874	Sorghum	mitochondrion	37.03	31.54
OQU87776	Sorghum	endoplasmic reticulum, golgi	34.47	29.84
EES03991	Sorghum	plastid	37.03	27.43
EES08114	Sorghum	golgi, mitochondrion, plastid, vacuole	38.74	25.39
OQU77087	Sorghum	mitochondrion	38.05	24.16
KXG23110	Sorghum	endoplasmic reticulum	38.4	20.68
EER93372	Sorghum	mitochondrion	33.28	14.89

Protein Annotations

MapMan:21.3.1.1.2	Gene3D:3.40.50.150	UniProt:A0A1B6PMM5	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016740	GO:GO:0032259	GO:GO:0052546
EnsemblPlants:KXG26938	ProteinID:KXG26938	ProteinID:KXG26938.1	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF763
InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3006G183500	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI00081AE9C0
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:53849187..53853738

Molecular Weight (calculated)

64907.3 Da

IEP (calculated)

8.351

GRAVY (calculated)

-0.118

Length

586 amino acids

Sequence
(BLAST)

001: MGLLSSLPPH RRGALSGGGW QWSFLDVVWG VFLIAVVVFL ALVFTPRRGD PVLTAASVAR AGGSGGAVPP CAASEVDLLP CEDPRRSSRL SREMNYYRER
101: HCPARGEALA CLVPPPRGYR VPVPWPESLH KIWHDNMPYG KIAERKGHQG WMKHEGSYFI FPGGGTMFPD GAEQYIEKLS QYVPLKTGVV RTGLDMGCGV
201: ASFGGFLLKE NIMTLSFAPR DSHKSQIQFA LERGIPAFLL MLGTRRLPFP AQSFDFVHCS RCLIPFTAYN GSYLIEADRL LRPGGYLIIS GPPVRWKNQE
301: KEWDELQAMA GALCYKLITV DGNTAIWKKP AEASCLPNQN GFGLDLCSTN DDPDEAWYFK LNKCVGKVSM SEEIAIGSVP RWPDRLSKPS ARASVINNGA
401: SLFEVDSQKW VRRVAYYKKS LGVKLGSTHI RNVMDMNAFF GGFAAAIVSD PVWVMNVVPA QKPLTLGVIY DRGLIGVYHD WCEPFSTYPR TYDLIHADAI
501: DSLISDPISG TSRCDLFDVM LEMDRILRPE GTAVIRASPD VVDKAAQIAR SIRWKAQVHD SEPESGSTEK ILVATKTFWK LPLTSQ

Best Arabidopsis Sequence Match ( AT4G00740.2 )
(BLAST)

001: MGHVNLPASK RGNPRQWRLL DIVTAAFFGI VLLFFILLFT PLGDSMAASG RQTLLLSTAS DPRQRQRLVT LVEAGQHLQP IEYCPAEAVA HMPCEDPRRN
101: SQLSREMNFY RERHCPLPEE TPLCLIPPPS GYKIPVPWPE SLHKIWHANM PYNKIADRKG HQGWMKREGE YFTFPGGGTM FPGGAGQYIE KLAQYIPLNG
201: GTLRTALDMG CGVASFGGTL LSQGILALSF APRDSHKSQI QFALERGVPA FVAMLGTRRL PFPAYSFDLM HCSRCLIPFT AYNATYFIEV DRLLRPGGYL
301: VISGPPVQWP KQDKEWADLQ AVARALCYEL IAVDGNTVIW KKPVGDSCLP SQNEFGLELC DESVPPSDAW YFKLKRCVTR PSSVKGEHAL GTISKWPERL
401: TKVPSRAIVM KNGLDVFEAD ARRWARRVAY YRDSLNLKLK SPTVRNVMDM NAFFGGFAAT LASDPVWVMN VIPARKPLTL DVIYDRGLIG VYHDWCEPFS
501: TYPRTYDFIH VSGIESLIKR QDSSKSRCSL VDLMVEMDRI LRPEGKVVIR DSPEVLDKVA RMAHAVRWSS SIHEKEPESH GREKILIATK SLWKLPSNSH

Arabidopsis Description

Probable methyltransferase PMT13 [Source:UniProtKB/Swiss-Prot;Acc:Q93W95]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.