Factsheet for Bra000959.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
nucleus 1
mitochondrion 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74348	Canola	plastid	99.67	99.67
CDX91893	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	99.33	99.33
AT4G00740.1	Thale cress	golgi	94.97	94.5
VIT_15s0048g01990.t01	Wine grape	mitochondrion	81.74	81.74
PGSC0003DMT400071375	Potato	mitochondrion	80.74	80.47
Solyc01g091640.2.1	Tomato	nucleus	80.23	79.97
Bra037356.1-P	Field mustard	mitochondrion	92.29	79.62
KRH65147	Soybean	endoplasmic reticulum	76.38	76.38
KRH48238	Soybean	endoplasmic reticulum	75.71	76.09
KRH00643	Soybean	endoplasmic reticulum, mitochondrion	75.38	75.5
KRH40535	Soybean	plastid	74.54	74.54
GSMUA_Achr5P20080_001	Banana	mitochondrion	70.69	69.98
GSMUA_Achr11P...	Banana	golgi, mitochondrion	68.68	68.33
TraesCS2B01G419000.1	Wheat	golgi, plastid	63.32	65.4
TraesCS2A01G400900.1	Wheat	golgi, mitochondrion	62.98	65.28
TraesCS2D01G398400.1	Wheat	golgi, mitochondrion, plastid	63.15	65.11
HORVU6Hr1G056160.1	Barley	cytosol	49.92	64.22
Os04t0569400-00	Rice	golgi, mitochondrion	62.48	63.65
KXG26938	Sorghum	endoplasmic reticulum, golgi, mitochondrion, plastid	62.48	63.65
HORVU2Hr1G095160.7	Barley	plastid	63.32	63.11
Zm00001d002631_P003	Maize	endoplasmic reticulum, golgi, mitochondrion, plastid	61.98	62.29
Bra000296.1-P	Field mustard	plastid	38.86	42.26
Bra013282.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	42.04	40.48
Bra012437.1-P	Field mustard	endoplasmic reticulum, golgi	41.54	40.39
Bra016293.1-P	Field mustard	endoplasmic reticulum, golgi	41.21	40.26
Bra024678.1-P	Field mustard	endoplasmic reticulum, golgi	41.37	40.23
Bra037916.1-P	Field mustard	cytosol	41.88	40.0
Bra033172.1-P	Field mustard	cytosol	41.37	39.84
Bra008529.1-P	Field mustard	mitochondrion	41.21	39.61
Bra035476.1-P	Field mustard	cytosol	42.38	39.47
Bra041005.1-P	Field mustard	cytosol	41.88	39.19
Bra004933.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	41.37	39.08
Bra023213.1-P	Field mustard	endoplasmic reticulum, golgi	38.69	38.5
Bra039319.1-P	Field mustard	golgi	40.7	38.45
Bra020975.1-P	Field mustard	endoplasmic reticulum, golgi	38.19	38.26
Bra012557.1-P	Field mustard	cytosol, golgi, nucleus	38.36	38.1
Bra033872.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	37.86	37.48
Bra001909.1-P	Field mustard	endoplasmic reticulum, golgi	36.68	36.14
Bra014936.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	36.52	35.56
Bra006254.1-P	Field mustard	endoplasmic reticulum, golgi	35.85	35.2
Bra000181.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	34.34	35.1
Bra030570.1-P	Field mustard	endoplasmic reticulum, golgi	35.18	33.87
Bra015316.1-P	Field mustard	endoplasmic reticulum, golgi	35.18	33.71
Bra009489.1-P	Field mustard	plastid	33.33	33.67
Bra017538.1-P	Field mustard	golgi, plasma membrane	40.7	33.61
Bra029822.1-P	Field mustard	mitochondrion, plastid	32.66	33.39
Bra010830.1-P	Field mustard	golgi	37.69	32.99
Bra015681.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	35.68	32.87
Bra013374.1-P	Field mustard	cytosol, golgi	38.19	32.25
Bra000145.1-P	Field mustard	endoplasmic reticulum	35.51	31.27
Bra005018.1-P	Field mustard	mitochondrion	36.18	31.12
Bra014710.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	33.84	29.88
Bra030140.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	37.52	29.87
Bra032319.1-P	Field mustard	cytosol	37.35	29.61
Bra005438.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	37.35	29.27
Bra025737.1-P	Field mustard	mitochondrion	30.49	25.28
Bra038881.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid, vacuole	36.68	24.28
Bra009158.1-P	Field mustard	cytosol	37.02	23.17
Bra024260.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	34.51	22.06
Bra036837.1-P	Field mustard	golgi, mitochondrion, plasma membrane, plastid, vacuole	33.33	21.77
Bra031938.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	5.19	10.4

Protein Annotations

MapMan:21.3.1.1.2	Gene3D:3.40.50.150	EnsemblPlantsGene:Bra000959	EnsemblPlants:Bra000959.1	EnsemblPlants:Bra000959.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	UniProt:M4C9T0	PFAM:PF03141	PANTHER:PTHR10108
PANTHER:PTHR10108:SF763	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI0002540708
SEG:seg	:	:	:	:	:

Description

AT4G00740 (E=6e-305) | dehydration-responsive protein-related

Coordinates

chrA03:+:14129577..14132193

Molecular Weight (calculated)

67038.0 Da

IEP (calculated)

8.760

GRAVY (calculated)

-0.219

Length

597 amino acids

Sequence
(BLAST)

001: MGLPSSKRNN QRQWSLLDIV TAAFFGIVLL FFILLFTPLG DSMAASGRQT LLLSTASDPR QRQRLVTLVE SGQHLQPIEY CPADAVAHMP CEDPRRNSQL
101: SREMNFYRER HCPLPEETPL CLIPPPSGYK ISVPWPESLH KIWHANMPYN KIADRKGHQG WMKREGDYFT FPGGGTMFPG GAGQYIEKLS QYIPLNGGVL
201: RTALDMGCGV ASFGGTLLSQ GILALSFAPR DSHKSQIQFA LERGVPAFVA MLGTRRLPFP ASSFDLMHCS RCLIPFTAYN ATYFIEVDRL LRPGGYLVIS
301: GPPVQWPKQD KEWADLQAVA RALCYELIAV DGNTVIWKKP VGDSCLPSQN EFGLELCDES VPPSDAWYYK LKKCVTRPSS VKGDNALGTI PKWPERLTKV
401: PSRAIAMKNG LDVFEADARR WARRVAYYRD SLNLELKSPA VRNVMDMNAF FGGFAAALAS ESVWVMNVIP ARKPLTLDVI YDRGLIGVYH DWCEPFSTYP
501: RTYDFIHVSG IESLIKRSDS SKSRCSLVDL MVEMDRILRP EGKVLIRDTP EVLDKVARMA HAVRWSSTIH DKEPESHGRE KILVATKPLW KMPSNSH

Best Arabidopsis Sequence Match ( AT4G00740.2 )
(BLAST)

001: MGHVNLPASK RGNPRQWRLL DIVTAAFFGI VLLFFILLFT PLGDSMAASG RQTLLLSTAS DPRQRQRLVT LVEAGQHLQP IEYCPAEAVA HMPCEDPRRN
101: SQLSREMNFY RERHCPLPEE TPLCLIPPPS GYKIPVPWPE SLHKIWHANM PYNKIADRKG HQGWMKREGE YFTFPGGGTM FPGGAGQYIE KLAQYIPLNG
201: GTLRTALDMG CGVASFGGTL LSQGILALSF APRDSHKSQI QFALERGVPA FVAMLGTRRL PFPAYSFDLM HCSRCLIPFT AYNATYFIEV DRLLRPGGYL
301: VISGPPVQWP KQDKEWADLQ AVARALCYEL IAVDGNTVIW KKPVGDSCLP SQNEFGLELC DESVPPSDAW YFKLKRCVTR PSSVKGEHAL GTISKWPERL
401: TKVPSRAIVM KNGLDVFEAD ARRWARRVAY YRDSLNLKLK SPTVRNVMDM NAFFGGFAAT LASDPVWVMN VIPARKPLTL DVIYDRGLIG VYHDWCEPFS
501: TYPRTYDFIH VSGIESLIKR QDSSKSRCSL VDLMVEMDRI LRPEGKVVIR DSPEVLDKVA RMAHAVRWSS SIHEKEPESH GREKILIATK SLWKLPSNSH

Arabidopsis Description

Probable methyltransferase PMT13 [Source:UniProtKB/Swiss-Prot;Acc:Q93W95]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.