Factsheet for TraesCS2D01G398400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

plastid 2
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G419000.1	Wheat	golgi, plastid	97.75	97.92
TraesCS2A01G400900.1	Wheat	golgi, mitochondrion	96.37	96.88
HORVU2Hr1G095160.7	Barley	plastid	97.41	94.16
Os04t0569400-00	Rice	golgi, mitochondrion	88.77	87.71
HORVU6Hr1G056160.1	Barley	cytosol	70.12	87.5
KXG26938	Sorghum	endoplasmic reticulum, golgi, mitochondrion, plastid	86.18	85.15
Zm00001d002631_P003	Maize	endoplasmic reticulum, golgi, mitochondrion, plastid	85.15	83.0
GSMUA_Achr5P20080_001	Banana	mitochondrion	71.33	68.49
GSMUA_Achr11P...	Banana	golgi, mitochondrion	70.47	68.0
VIT_15s0048g01990.t01	Wine grape	mitochondrion	67.53	65.49
Solyc01g091640.2.1	Tomato	nucleus	67.7	65.44
PGSC0003DMT400071375	Potato	mitochondrion	67.7	65.44
KRH48238	Soybean	endoplasmic reticulum	65.8	64.14
KRH00643	Soybean	endoplasmic reticulum, mitochondrion	65.98	64.09
KRH40535	Soybean	plastid	65.98	63.99
AT4G00740.1	Thale cress	golgi	65.8	63.5
KRH65147	Soybean	endoplasmic reticulum	65.46	63.48
CDX91893	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	65.28	63.32
Bra000959.1-P	Field mustard	plastid	65.11	63.15
CDX74348	Canola	plastid	64.77	62.81
CDY07198	Canola	mitochondrion	63.39	61.27
CDY51142	Canola	cytosol	62.87	59.0
Bra037356.1-P	Field mustard	mitochondrion	63.04	52.75
TraesCS1D01G216200.1	Wheat	endoplasmic reticulum, golgi	44.04	42.22
TraesCS2D01G397900.1	Wheat	mitochondrion	46.11	41.85
TraesCS5D01G234300.1	Wheat	endoplasmic reticulum, golgi	43.87	41.37
TraesCS6D01G237200.1	Wheat	golgi	44.73	40.28
TraesCS7D01G027500.1	Wheat	endoplasmic reticulum, golgi	43.52	40.06
TraesCS5D01G429900.1	Wheat	endoplasmic reticulum, golgi, vacuole	42.14	39.87
TraesCS4D01G150500.1	Wheat	endoplasmic reticulum	42.49	39.81
TraesCS6D01G025000.1	Wheat	cytosol	43.01	39.46
TraesCS1D01G202300.2	Wheat	endoplasmic reticulum	41.28	39.31
TraesCS3D01G389400.1	Wheat	endoplasmic reticulum	38.17	36.29
TraesCS7D01G433000.1	Wheat	plastid	38.17	36.05
TraesCS1D01G153300.1	Wheat	endoplasmic reticulum, golgi	37.82	35.55
TraesCS1D01G238600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	36.27	35.0
TraesCS1D01G294500.1	Wheat	golgi, plasma membrane, plastid	38.17	33.13
TraesCS2D01G569900.1	Wheat	plastid	39.55	32.57
TraesCS3D01G356400.1	Wheat	endoplasmic reticulum	37.48	31.09
TraesCS3D01G342700.1	Wheat	golgi	37.31	30.17
TraesCS3D01G401300.2	Wheat	golgi	38.86	28.02
TraesCS5D01G418500.1	Wheat	mitochondrion	32.99	26.42
TraesCS7D01G380100.1	Wheat	mitochondrion	38.17	24.21
TraesCS4D01G094600.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole	36.61	23.74
TraesCS5D01G127100.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	38.34	21.83

Protein Annotations

MapMan:21.3.1.1.2	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016740	GO:GO:0052546	PFAM:PF03141	PANTHER:PTHR10108
PANTHER:PTHR10108:SF763	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G398400
EnsemblPlants:TraesCS2D01G398400.1	TIGR:cd02440	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:+:511522857..511526649

Molecular Weight (calculated)

64539.8 Da

IEP (calculated)

8.232

GRAVY (calculated)

-0.161

Length

579 amino acids

Sequence
(BLAST)

001: MGLLSSLRPH RRGSSGGGAQ WQWSFLDAVW AVFLVAVVVF LALVFTPRRG DTVAALTGAA VPPCAASEVD LLPCEDPRRS SRLSREMNYY RERHCPARGE
101: APACLVPPPP GYRVPVPWPE SLHKIWHDNM PYGKIAERKG HQGWMKQEGS YFLFPGGGTM FPDGAEQYIE KLTKYVPLRS GLLRTGLDMG CGVASFGGFL
201: LKENITALSF APRDSHKSQI QFALERGIPA FLLMLGTRRL PFPAQSFDFV HCSRCLIPFT AYNGSYLIEV DRLLRPGGYL IISGPPVQWK KQEKEWGELQ
301: AMAESLCYKL ITVDGNTAIW KKPNQASCLP NQNEFGLDLC STDDDPDEAW YFKLKKCISK VSLLEEIAVG SIDKWPNRLS KPSARASFMD DGVNLFEADT
401: QKWVKRVSYY KRSLGVKLGT ALIRNVMDMN AFFGGFAAAV ASDPVWVMNV VPAKNPLTLG VIYDRGLIGV YHDWCEPFST YPRTYDLIHA DGINSLISDP
501: KSGKIRCDLF DVMLEMDRIL RPEGTAVIRD SPDVINKAVQ VAQSIRWTTQ VHDSEPESGS AEKILIATKT FWKLPLTSG

Best Arabidopsis Sequence Match ( AT4G00740.2 )
(BLAST)

001: MGHVNLPASK RGNPRQWRLL DIVTAAFFGI VLLFFILLFT PLGDSMAASG RQTLLLSTAS DPRQRQRLVT LVEAGQHLQP IEYCPAEAVA HMPCEDPRRN
101: SQLSREMNFY RERHCPLPEE TPLCLIPPPS GYKIPVPWPE SLHKIWHANM PYNKIADRKG HQGWMKREGE YFTFPGGGTM FPGGAGQYIE KLAQYIPLNG
201: GTLRTALDMG CGVASFGGTL LSQGILALSF APRDSHKSQI QFALERGVPA FVAMLGTRRL PFPAYSFDLM HCSRCLIPFT AYNATYFIEV DRLLRPGGYL
301: VISGPPVQWP KQDKEWADLQ AVARALCYEL IAVDGNTVIW KKPVGDSCLP SQNEFGLELC DESVPPSDAW YFKLKRCVTR PSSVKGEHAL GTISKWPERL
401: TKVPSRAIVM KNGLDVFEAD ARRWARRVAY YRDSLNLKLK SPTVRNVMDM NAFFGGFAAT LASDPVWVMN VIPARKPLTL DVIYDRGLIG VYHDWCEPFS
501: TYPRTYDFIH VSGIESLIKR QDSSKSRCSL VDLMVEMDRI LRPEGKVVIR DSPEVLDKVA RMAHAVRWSS SIHEKEPESH GREKILIATK SLWKLPSNSH

Arabidopsis Description

Probable methyltransferase PMT13 [Source:UniProtKB/Swiss-Prot;Acc:Q93W95]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.