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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G095160.7 Barley plastid 93.53 72.45
TraesCS2B01G419000.1 Wheat golgi, plastid 87.72 70.42
TraesCS2D01G398400.1 Wheat golgi, mitochondrion, plastid 87.5 70.12
TraesCS2A01G400900.1 Wheat golgi, mitochondrion 86.85 69.97
Os04t0569400-00 Rice golgi, mitochondrion 80.82 63.99
KXG26938 Sorghum endoplasmic reticulum, golgi, mitochondrion, plastid 78.23 61.95
Zm00001d002631_P003 Maize endoplasmic reticulum, golgi, mitochondrion, plastid 77.37 60.44
GSMUA_Achr11P... Banana golgi, mitochondrion 68.97 53.33
GSMUA_Achr5P20080_001 Banana mitochondrion 68.75 52.9
Solyc01g091640.2.1 Tomato nucleus 66.59 51.59
PGSC0003DMT400071375 Potato mitochondrion 66.59 51.59
KRH48238 Soybean endoplasmic reticulum 65.73 51.35
VIT_15s0048g01990.t01 Wine grape mitochondrion 65.3 50.75
KRH00643 Soybean endoplasmic reticulum, mitochondrion 64.87 50.5
KRH65147 Soybean endoplasmic reticulum 64.87 50.42
KRH40535 Soybean plastid 64.66 50.25
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 64.44 50.08
AT4G00740.1 Thale cress golgi 64.66 50.0
Bra000959.1-P Field mustard plastid 64.22 49.92
CDX74348 Canola plastid 63.79 49.58
CDY07198 Canola mitochondrion 63.36 49.08
CDY51142 Canola cytosol 63.58 47.81
HORVU2Hr1G095070.1 Barley cytosol 40.09 42.96
Bra037356.1-P Field mustard mitochondrion 63.58 42.63
HORVU5Hr1G102720.2 Barley cytosol 41.38 37.57
HORVU5Hr1G065680.2 Barley cytosol, endoplasmic reticulum, golgi 44.4 33.55
HORVU6Hr1G065360.4 Barley mitochondrion 44.83 32.25
HORVU1Hr1G051470.3 Barley endoplasmic reticulum 41.81 31.75
HORVU1Hr1G054470.1 Barley mitochondrion, plastid 42.46 31.57
HORVU4Hr1G033650.3 Barley endoplasmic reticulum 41.81 30.89
HORVU7Hr1G100920.3 Barley plastid 38.79 30.1
HORVU1Hr1G057520.1 Barley plastid 38.15 29.3
HORVU7Hr1G003860.2 Barley plasma membrane 44.4 29.1
HORVU3Hr1G089210.3 Barley vacuole 37.93 28.57
HORVU1Hr1G070430.8 Barley golgi, plasma membrane, vacuole 38.58 27.29
HORVU6Hr1G003900.3 Barley cytosol 42.67 26.65
HORVU3Hr1G088050.14 Barley endoplasmic reticulum, plasma membrane 39.22 24.33
HORVU3Hr1G085900.1 Barley golgi, plastid 39.22 24.33
HORVU2Hr1G127220.1 Barley cytosol 38.79 23.17
HORVU0Hr1G021970.3 Barley cytosol, nucleus 39.87 23.04
HORVU3Hr1G090970.1 Barley cytosol, golgi, mitochondrion, plastid, vacuole 40.09 23.02
HORVU5Hr1G099090.3 Barley mitochondrion 33.62 21.79
HORVU4Hr1G017470.1 Barley vacuole 38.58 20.07
HORVU5Hr1G037320.6 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid 39.66 19.74
Protein Annotations
EnsemblPlants:HORVU6Hr1G056160.1EnsemblPlantsGene:HORVU6Hr1G056160Gene3D:3.40.50.150GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0016740GO:GO:0032259InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTases
ncoils:CoilPANTHER:PTHR10108PANTHER:PTHR10108:SF763PFAM:PF03141SEG:segSUPFAM:SSF53335
UniParc:UPI000B46D19BUniProt:A0A287U9J3MapMan:21.3.1.1.2:::
Description
No Description!
Coordinates
chrchr6H:-:360128234..360131520
Molecular Weight (calculated)
49288.5 Da
IEP (calculated)
8.300
GRAVY (calculated)
-0.158
Length
464 amino acids
Sequence
(BLAST)
001: LPYEDXXXXX XXXXXXXXXX XXXXXXXXEA SACLVPPPPG YRVPVPWPES LHKVPCQCTT SFCISCSEWL IFIWHDNMPY GKIAERKGHQ GWMKQEGSYF
101: LFPGGGTMFP DGAEQYIEKL TKYVPLKSGL LRTGLDMGCG VASFGGFLLK ENITALSFAP RDSHKSQIQF ALERGIPAFL LMLGTRRLPF PAQSFDFVHC
201: SRCLIPFTAY NGSYLIEVDR LLRPGGYLII SGPPVQWKKQ EKEWSELQAM AQSLCYKLIT VDGNTAIWKK PNQASCLPNQ NEFGLDLCST GDDPDEAWYF
301: KLKKCISKVS LSEEIAVGSI DKWPNRLSKP SARASFMDDG VNLFEADTQK WVKRVSYYKR SLGVKLGTAL IRNVMDMNAF FGGLAAAVAS DPVWVMNVVP
401: AKKPLTLGVI YDRGLIGVYH DWCEPFSTYP RTYDLIHADG INSLISDPKS GKSRRCLVRS FPPG
Best Arabidopsis Sequence Match ( AT4G00740.2 )
(BLAST)
001: MGHVNLPASK RGNPRQWRLL DIVTAAFFGI VLLFFILLFT PLGDSMAASG RQTLLLSTAS DPRQRQRLVT LVEAGQHLQP IEYCPAEAVA HMPCEDPRRN
101: SQLSREMNFY RERHCPLPEE TPLCLIPPPS GYKIPVPWPE SLHKIWHANM PYNKIADRKG HQGWMKREGE YFTFPGGGTM FPGGAGQYIE KLAQYIPLNG
201: GTLRTALDMG CGVASFGGTL LSQGILALSF APRDSHKSQI QFALERGVPA FVAMLGTRRL PFPAYSFDLM HCSRCLIPFT AYNATYFIEV DRLLRPGGYL
301: VISGPPVQWP KQDKEWADLQ AVARALCYEL IAVDGNTVIW KKPVGDSCLP SQNEFGLELC DESVPPSDAW YFKLKRCVTR PSSVKGEHAL GTISKWPERL
401: TKVPSRAIVM KNGLDVFEAD ARRWARRVAY YRDSLNLKLK SPTVRNVMDM NAFFGGFAAT LASDPVWVMN VIPARKPLTL DVIYDRGLIG VYHDWCEPFS
501: TYPRTYDFIH VSGIESLIKR QDSSKSRCSL VDLMVEMDRI LRPEGKVVIR DSPEVLDKVA RMAHAVRWSS SIHEKEPESH GREKILIATK SLWKLPSNSH
Arabidopsis Description
Probable methyltransferase PMT13 [Source:UniProtKB/Swiss-Prot;Acc:Q93W95]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.