Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, mitochondrion

Predictor Summary:
  • plastid 6
  • endoplasmic reticulum 1
  • mitochondrion 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, mitochondrion
Any Predictor:endoplasmic reticulum, golgi, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
PProwler:plastid
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
 nucleus: 21132161
endoplasmic reticulum: 27224218
mitochondrion: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH40535 Soybean plastid 96.31 96.15
KRH65147 Soybean endoplasmic reticulum 84.73 84.59
KRH48238 Soybean endoplasmic reticulum 83.89 84.18
Solyc01g091640.2.1 Tomato nucleus 78.69 78.3
VIT_15s0048g01990.t01 Wine grape mitochondrion 78.36 78.22
PGSC0003DMT400071375 Potato mitochondrion 78.52 78.13
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 75.67 75.54
AT4G00740.1 Thale cress golgi 76.01 75.5
Bra000959.1-P Field mustard plastid 75.5 75.38
CDX74348 Canola plastid 75.17 75.04
CDY07198 Canola mitochondrion 73.32 72.95
CDY51142 Canola cytosol 72.32 69.85
GSMUA_Achr5P20080_001 Banana mitochondrion 70.64 69.82
GSMUA_Achr11P... Banana golgi, mitochondrion 67.79 67.33
TraesCS2B01G419000.1 Wheat golgi, plastid 64.26 66.26
TraesCS2D01G398400.1 Wheat golgi, mitochondrion, plastid 64.09 65.98
TraesCS2A01G400900.1 Wheat golgi, mitochondrion 63.76 65.97
Os04t0569400-00 Rice golgi, mitochondrion 64.43 65.53
KXG26938 Sorghum endoplasmic reticulum, golgi, mitochondrion, plastid 63.93 65.02
HORVU6Hr1G056160.1 Barley cytosol 50.5 64.87
HORVU2Hr1G095160.7 Barley plastid 64.09 63.77
Zm00001d002631_P003 Maize endoplasmic reticulum, golgi, mitochondrion, plastid 63.09 63.3
Bra037356.1-P Field mustard mitochondrion 72.65 62.57
KRH00647 Soybean cytosol 38.93 43.04
KRG91450 Soybean mitochondrion 42.28 42.0
KRH70718 Soybean endoplasmic reticulum 42.28 41.52
KRH45909 Soybean endoplasmic reticulum 41.78 40.95
KRH74853 Soybean endoplasmic reticulum, golgi 41.61 40.86
KRG99086 Soybean endoplasmic reticulum 41.28 40.46
KRH04297 Soybean endoplasmic reticulum 41.44 40.29
KRH57576 Soybean endoplasmic reticulum 41.28 40.13
KRH63351 Soybean endoplasmic reticulum 40.1 39.44
KRH01812 Soybean extracellular, plasma membrane, vacuole 37.75 39.13
KRH09116 Soybean endoplasmic reticulum 40.94 38.61
KRG97692 Soybean plastid 25.0 38.6
KRH39668 Soybean endoplasmic reticulum 38.42 38.36
KRH48242 Soybean endoplasmic reticulum 41.11 38.22
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 39.77 38.1
KRH38569 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 40.44 38.07
KRH60099 Soybean cytosol 39.77 38.04
KRH76381 Soybean cytosol, golgi, plasma membrane 38.09 38.02
KRH41379 Soybean cytosol 40.1 38.0
KRH07206 Soybean cytosol, golgi, plasma membrane 37.92 37.79
KRH54546 Soybean golgi 36.58 37.72
KRH14916 Soybean nucleus 37.42 37.48
KRH07708 Soybean cytosol 37.58 37.46
KRH73268 Soybean endoplasmic reticulum 37.08 37.14
KRH07208 Soybean cytosol 37.58 37.09
KRH31179 Soybean plasma membrane 36.41 36.53
KRH46879 Soybean endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 38.42 36.35
KRH19571 Soybean golgi 35.07 35.24
KRH32196 Soybean golgi 34.9 35.14
KRH31698 Soybean endoplasmic reticulum 36.74 35.04
KRH34393 Soybean endoplasmic reticulum 36.24 34.78
KRH69085 Soybean endoplasmic reticulum, golgi 36.24 34.56
KRG92410 Soybean endoplasmic reticulum, golgi 35.74 34.35
KRH72067 Soybean plastid 34.23 33.83
KRG95687 Soybean cytosol, golgi, plasma membrane, plastid 35.4 33.81
KRH67404 Soybean endoplasmic reticulum, golgi, plasma membrane 36.07 33.8
KRH15065 Soybean nucleus 37.08 33.28
KRH73069 Soybean endoplasmic reticulum 36.74 33.28
KRH33118 Soybean extracellular, golgi, plastid 33.72 33.17
KRG97843 Soybean endoplasmic reticulum 36.24 32.58
KRH16455 Soybean endoplasmic reticulum, golgi 35.74 32.27
KRH31030 Soybean endoplasmic reticulum, plasma membrane 36.24 32.24
KRH18054 Soybean endoplasmic reticulum, golgi 34.9 31.37
KRH64022 Soybean endoplasmic reticulum 37.58 27.65
KRH53915 Soybean endoplasmic reticulum 37.25 27.54
KRH28732 Soybean endoplasmic reticulum 35.23 27.34
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 35.91 26.88
KRH53330 Soybean endoplasmic reticulum 37.42 26.71
KRH69842 Soybean mitochondrion 36.91 26.63
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 37.25 26.62
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 36.58 26.23
KRH40943 Soybean golgi 36.58 25.89
KRH05816 Soybean endoplasmic reticulum 30.03 25.61
KRH15210 Soybean mitochondrion 29.87 25.04
Protein Annotations
EntrezGene:100788069MapMan:21.3.1.1.2Gene3D:3.40.50.150EMBL:ACUP02011463EnsemblPlantsGene:GLYMA_18G225900GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259UniProt:K7MU41ProteinID:KRH00642.1EnsemblPlants:KRH00643ProteinID:KRH00643ProteinID:KRH00643.1
ProteinID:KRH00644.1PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF763InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTases
SUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI000233E132SEG:seg::
Description
hypothetical protein
Coordinates
chr18:-:51424792..51431293
Molecular Weight (calculated)
66932.9 Da
IEP (calculated)
8.657
GRAVY (calculated)
-0.204
Length
596 amino acids
Sequence
(BLAST)
001: MGHSNSSSSS SPSKRGHALR QWRLLDLVSG VFFFLVLLFF TMVFTPLGDS LAASGRQTLL RSGADPQQRH RLVAAIEAGG RGVEACPAAD ADHMPCEDPR
101: LNSQLSREMN YYRERHCPRP EDSPLCLIPP PHGYRVPVPW PESLHKIWHS NMPYNKIADR KGHQGWMKLE GQHFIFPGGG TMFPDGAEQY IEKLGQYIPI
201: SEGVLRTALD MGCGVASFGG YMLSKNILTM SFAPRDSHKA QIQFALERGI PAFVAMLGTR RLPFPAFGFD LVHCSRCLIP FTAYNASYFI EVDRLLRPGG
301: YLVISGPPVQ WPKQDKEWSD LQAVARALCY ELIAVDGNTV IWKKPVGESC LPNENEFGLE LCDDSDYPSQ AWYFKLKKCV SRTSVKGDYA IGIIPKWPER
401: LTAIPPRSTL LKNGVDVYEA DTKRWARRVA HYKNSLKIKL GTRFVRNVMD MNALFGGFAA ALKSDPVWVI NVVPALKPPT LDVIFDRGLI GVYHDWCEPF
501: STYPRSYDLI HVASIESLIK DPASGQNRCT LVDLMVEIDR MLRPEGTVVV RDAPEVIDRV ARIASAVRWK PTVYDKEPES HGREKILVAT KTLWKL
Best Arabidopsis Sequence Match ( AT4G00740.2 )
(BLAST)
001: MGHVNLPASK RGNPRQWRLL DIVTAAFFGI VLLFFILLFT PLGDSMAASG RQTLLLSTAS DPRQRQRLVT LVEAGQHLQP IEYCPAEAVA HMPCEDPRRN
101: SQLSREMNFY RERHCPLPEE TPLCLIPPPS GYKIPVPWPE SLHKIWHANM PYNKIADRKG HQGWMKREGE YFTFPGGGTM FPGGAGQYIE KLAQYIPLNG
201: GTLRTALDMG CGVASFGGTL LSQGILALSF APRDSHKSQI QFALERGVPA FVAMLGTRRL PFPAYSFDLM HCSRCLIPFT AYNATYFIEV DRLLRPGGYL
301: VISGPPVQWP KQDKEWADLQ AVARALCYEL IAVDGNTVIW KKPVGDSCLP SQNEFGLELC DESVPPSDAW YFKLKRCVTR PSSVKGEHAL GTISKWPERL
401: TKVPSRAIVM KNGLDVFEAD ARRWARRVAY YRDSLNLKLK SPTVRNVMDM NAFFGGFAAT LASDPVWVMN VIPARKPLTL DVIYDRGLIG VYHDWCEPFS
501: TYPRTYDFIH VSGIESLIKR QDSSKSRCSL VDLMVEMDRI LRPEGKVVIR DSPEVLDKVA RMAHAVRWSS SIHEKEPESH GREKILIATK SLWKLPSNSH
Arabidopsis Description
Probable methyltransferase PMT13 [Source:UniProtKB/Swiss-Prot;Acc:Q93W95]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.