Factsheet for VIT_15s0048g01990.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071375	Potato	mitochondrion	83.42	83.14
Solyc01g091640.2.1	Tomato	nucleus	82.75	82.47
AT4G00740.1	Thale cress	golgi	82.41	82.0
Bra000959.1-P	Field mustard	plastid	81.74	81.74
CDX74348	Canola	plastid	81.41	81.41
CDX91893	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	81.41	81.41
KRH65147	Soybean	endoplasmic reticulum	79.06	79.06
KRH48238	Soybean	endoplasmic reticulum	78.39	78.79
CDY07198	Canola	mitochondrion	78.89	78.63
KRH00643	Soybean	endoplasmic reticulum, mitochondrion	78.22	78.36
KRH40535	Soybean	plastid	77.55	77.55
CDY51142	Canola	cytosol	77.39	74.88
GSMUA_Achr5P20080_001	Banana	mitochondrion	73.2	72.47
GSMUA_Achr11P...	Banana	golgi, mitochondrion	70.69	70.33
TraesCS2B01G419000.1	Wheat	golgi, plastid	65.66	67.82
TraesCS2A01G400900.1	Wheat	golgi, mitochondrion	65.16	67.53
TraesCS2D01G398400.1	Wheat	golgi, mitochondrion, plastid	65.49	67.53
Bra037356.1-P	Field mustard	mitochondrion	78.06	67.34
Os04t0569400-00	Rice	golgi, mitochondrion	65.66	66.89
KXG26938	Sorghum	endoplasmic reticulum, golgi, mitochondrion, plastid	65.33	66.55
HORVU6Hr1G056160.1	Barley	cytosol	50.75	65.3
HORVU2Hr1G095160.7	Barley	plastid	65.49	65.28
Zm00001d002631_P003	Maize	endoplasmic reticulum, golgi, mitochondrion, plastid	64.66	64.98
VIT_04s0023g02790.t01	Wine grape	cytosol	35.18	41.5
VIT_02s0012g00580.t01	Wine grape	endoplasmic reticulum, golgi	41.71	40.75
VIT_02s0025g03200.t01	Wine grape	cytosol	42.38	40.03
VIT_15s0048g01940.t01	Wine grape	mitochondrion	42.21	39.87
VIT_17s0000g06050.t01	Wine grape	cytosol	40.7	39.84
VIT_02s0033g01120.t01	Wine grape	cytosol	39.53	39.33
VIT_16s0100g00570.t01	Wine grape	mitochondrion	42.55	38.72
VIT_05s0124g00530.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, vacuole	39.2	38.05
VIT_01s0026g02340.t01	Wine grape	golgi	40.2	37.74
VIT_05s0049g01180.t01	Wine grape	endoplasmic reticulum, golgi	37.19	36.27
VIT_07s0005g03630.t01	Wine grape	endoplasmic reticulum, golgi	37.19	35.81
VIT_08s0007g05750.t01	Wine grape	endoplasmic reticulum, plasma membrane	35.85	35.61
VIT_13s0067g01690.t01	Wine grape	endoplasmic reticulum, golgi	35.51	34.98
VIT_13s0019g02250.t01	Wine grape	golgi	37.52	32.65
VIT_18s0001g01600.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	36.01	32.28
VIT_04s0044g01670.t01	Wine grape	cytosol	37.86	27.39
VIT_18s0001g01270.t01	Wine grape	plasma membrane	38.02	25.85
VIT_18s0001g12470.t01	Wine grape	mitochondrion	31.16	25.69

Protein Annotations

EntrezGene:100255820	wikigene:100255820	MapMan:21.3.1.1.2	Gene3D:3.40.50.150	ProteinID:CBI38767	ProteinID:CBI38767.3
UniProt:D7U7I8	EMBL:FN596739	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016740	GO:GO:0032259	GO:GO:0052546	EntrezGene:LOC100255820
wikigene:LOC100255820	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF763	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	TIGR:TC63165	TMHMM:TMhelix	UniParc:UPI00015CABF3	ArrayExpress:VIT_15s0048g01990	EnsemblPlantsGene:VIT_15s0048g01990
EnsemblPlants:VIT_15s0048g01990.t01	unigene:Vvi.25162	RefSeq:XP_002272714	RefSeq:XP_002272714.1	RefSeq:XP_010661563.1	RefSeq:XP_010661564.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr15:+:16111683..16122635

Molecular Weight (calculated)

67147.1 Da

IEP (calculated)

8.352

GRAVY (calculated)

-0.186

Length

597 amino acids

Sequence
(BLAST)

001: MGHLNLPSSK RNARQYRLLD LVTASFFGIV IIFFLLVFTP LGDSLAASGR QALLLSTADP RQRQRLVALV EAGQQQAIEA CPAEEVDHMP CEDPRRNSQL
101: SREMNFYRER QCPLPAETPL CLIPPPDGYH IPVRWPDSLH KIWHSNMPHN KIADRKGHQG WMKEEGMYFI FPGGGTMFPD GAEQYIEKLS QYIPLTGGVL
201: RTALDMGCGV ASFGGYLLNQ GILTFSFAPR DSHKSQIQFA LERGIPALVA MLGTRRLPFP AFSFDLVHCS RCLIPFTAYN ATYFLEVDRL LRPGGYLVIS
301: GPPVLWPKQD KEWADLQAVA RALCYELKAV DGNTAIWKKP AGDSCLPNQN EFGLELCDES DDSSYAWYFK LKKCVTRISS VKDDQVVGMI PNWPDRLTKA
401: PSRATLLKNG IDVFEADTRR WARRVAYYKN SLNLKLGTAA IRNVMDMNAF FGGFAAALTS DPVWVMNVVP PRKPSTLGVI YDRGLIGVYH DWCEPFSTYP
501: RTYDLIHVTS IESLIKILGS GKNRCNLVDL MVEMDRILRP EGTVVIRDSP EVIDKIGRIA QAVRWTATIH EKEPESHGRE KILVATKNFW KLPSASH

Best Arabidopsis Sequence Match ( AT4G00740.2 )
(BLAST)

001: MGHVNLPASK RGNPRQWRLL DIVTAAFFGI VLLFFILLFT PLGDSMAASG RQTLLLSTAS DPRQRQRLVT LVEAGQHLQP IEYCPAEAVA HMPCEDPRRN
101: SQLSREMNFY RERHCPLPEE TPLCLIPPPS GYKIPVPWPE SLHKIWHANM PYNKIADRKG HQGWMKREGE YFTFPGGGTM FPGGAGQYIE KLAQYIPLNG
201: GTLRTALDMG CGVASFGGTL LSQGILALSF APRDSHKSQI QFALERGVPA FVAMLGTRRL PFPAYSFDLM HCSRCLIPFT AYNATYFIEV DRLLRPGGYL
301: VISGPPVQWP KQDKEWADLQ AVARALCYEL IAVDGNTVIW KKPVGDSCLP SQNEFGLELC DESVPPSDAW YFKLKRCVTR PSSVKGEHAL GTISKWPERL
401: TKVPSRAIVM KNGLDVFEAD ARRWARRVAY YRDSLNLKLK SPTVRNVMDM NAFFGGFAAT LASDPVWVMN VIPARKPLTL DVIYDRGLIG VYHDWCEPFS
501: TYPRTYDFIH VSGIESLIKR QDSSKSRCSL VDLMVEMDRI LRPEGKVVIR DSPEVLDKVA RMAHAVRWSS SIHEKEPESH GREKILIATK SLWKLPSNSH

Arabidopsis Description

Probable methyltransferase PMT13 [Source:UniProtKB/Swiss-Prot;Acc:Q93W95]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.