Factsheet for TraesCS2B01G419000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

plastid 2
mitochondrion 3
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G398400.1	Wheat	golgi, mitochondrion, plastid	97.92	97.75
TraesCS2A01G400900.1	Wheat	golgi, mitochondrion	96.02	96.35
HORVU2Hr1G095160.7	Barley	plastid	97.58	94.16
Os04t0569400-00	Rice	golgi, mitochondrion	89.27	88.05
HORVU6Hr1G056160.1	Barley	cytosol	70.42	87.72
KXG26938	Sorghum	endoplasmic reticulum, golgi, mitochondrion, plastid	85.99	84.81
Zm00001d002631_P003	Maize	endoplasmic reticulum, golgi, mitochondrion, plastid	84.95	82.66
GSMUA_Achr5P20080_001	Banana	mitochondrion	71.8	68.82
GSMUA_Achr11P...	Banana	golgi, mitochondrion	70.24	67.67
Solyc01g091640.2.1	Tomato	nucleus	68.17	65.78
PGSC0003DMT400071375	Potato	mitochondrion	68.17	65.78
VIT_15s0048g01990.t01	Wine grape	mitochondrion	67.82	65.66
KRH48238	Soybean	endoplasmic reticulum	66.09	64.31
KRH00643	Soybean	endoplasmic reticulum, mitochondrion	66.26	64.26
KRH40535	Soybean	plastid	66.26	64.15
KRH65147	Soybean	endoplasmic reticulum	65.74	63.65
AT4G00740.1	Thale cress	golgi	65.92	63.5
CDX91893	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	65.57	63.48
Bra000959.1-P	Field mustard	plastid	65.4	63.32
CDX74348	Canola	plastid	65.05	62.98
CDY07198	Canola	mitochondrion	63.67	61.44
CDY51142	Canola	cytosol	63.15	59.16
Bra037356.1-P	Field mustard	mitochondrion	63.49	53.03
TraesCS3B01G427600.1	Wheat	cytosol	27.85	42.15
TraesCS1B01G226800.1	Wheat	endoplasmic reticulum, golgi	43.43	41.56
TraesCS2B01G418400.1	Wheat	golgi	45.85	41.54
TraesCS5B01G225500.1	Wheat	cytosol, endoplasmic reticulum, golgi	43.6	41.04
TraesCS6B01G269400.1	Wheat	mitochondrion, plastid	44.64	40.12
TraesCS4B01G125500.1	Wheat	endoplasmic reticulum	42.39	39.64
TraesCS5B01G423200.2	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	42.56	39.61
TraesCS6B01G029000.1	Wheat	cytosol	42.56	38.99
TraesCS1B01G213600.1	Wheat	endoplasmic reticulum	41.87	37.99
TraesCS7B01G342700.1	Wheat	plastid	37.89	35.73
TraesCS1B01G170600.2	Wheat	endoplasmic reticulum, golgi	37.54	35.23
TraesCS1B01G250100.1	Wheat	plasma membrane	35.99	34.96
TraesCS1B01G305900.1	Wheat	mitochondrion	37.72	32.68
TraesCS3B01G395100.1	Wheat	plastid	37.54	30.69
TraesCS3B01G380800.1	Wheat	plastid	37.02	29.8
TraesCS3B01G439800.3	Wheat	cytosol, golgi, mitochondrion, plastid, vacuole	38.75	27.9
TraesCS5B01G413400.3	Wheat	mitochondrion	32.18	25.76
TraesCS7B01G286500.1	Wheat	mitochondrion	37.89	23.96
TraesCS4B01G098500.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	36.68	23.66
TraesCS5B01G120300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	38.24	21.69

Protein Annotations

MapMan:21.3.1.1.2	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016740	GO:GO:0052546	PFAM:PF03141	PANTHER:PTHR10108
PANTHER:PTHR10108:SF763	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G419000
EnsemblPlants:TraesCS2B01G419000.1	TIGR:cd02440	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2B:+:600703359..600707118

Molecular Weight (calculated)

64416.7 Da

IEP (calculated)

8.658

GRAVY (calculated)

-0.175

Length

578 amino acids

Sequence
(BLAST)

001: MGLLSSLRPH RRGSSGGAQW QWSFLDAVWA VFLVAVVVFL ALVFTPRRGD TLAALAGAAV PPCSASEVDL LPCEDPRRSS RLSREMNYYR ERHCPARGEA
101: PACLVPPPPG YRVHVPWPES LHKIWHDNMP YGKIAERKGH QGWMKQEGSY FLFPGGGTMF PDGAEQYIEK LTKYVPLKSG LLRTGLDMGC GVASFGGFLL
201: KENITALSFA PRDSHKSQIQ FALERGIPAF LLMLGTRRLP FPAQSFDFVH CSRCLIPFTA YNGSYLIEVD RLLRPGGYLI ISGPPVQWKK QEKEWGELQA
301: MAESLCYKLI TVDGNTAIWK KPNQASCLPN QNEFGLDLCS TDDDPDEAWY FKLKKCISKV SLSKEIAVGS IDKWPNRLSK PSARASFMDN GVNLFEADTQ
401: KWVKRVSYYK RSLGVKLGTA LIRNVMDMNA FFGGLAAAVA SDPVWVMNVV PAKKPLTLGV IYDRGLIGVY HDWCEPFSTY PRTYDLIHAD GINSLISDPK
501: SGKTRCDLFD VILEMDRILR PEGTAVIRDS PDVINKAVQV AQSIRWTTQV HDSEPESGSA EKILIATKTF WKLPLTSG

Best Arabidopsis Sequence Match ( AT4G00740.2 )
(BLAST)

001: MGHVNLPASK RGNPRQWRLL DIVTAAFFGI VLLFFILLFT PLGDSMAASG RQTLLLSTAS DPRQRQRLVT LVEAGQHLQP IEYCPAEAVA HMPCEDPRRN
101: SQLSREMNFY RERHCPLPEE TPLCLIPPPS GYKIPVPWPE SLHKIWHANM PYNKIADRKG HQGWMKREGE YFTFPGGGTM FPGGAGQYIE KLAQYIPLNG
201: GTLRTALDMG CGVASFGGTL LSQGILALSF APRDSHKSQI QFALERGVPA FVAMLGTRRL PFPAYSFDLM HCSRCLIPFT AYNATYFIEV DRLLRPGGYL
301: VISGPPVQWP KQDKEWADLQ AVARALCYEL IAVDGNTVIW KKPVGDSCLP SQNEFGLELC DESVPPSDAW YFKLKRCVTR PSSVKGEHAL GTISKWPERL
401: TKVPSRAIVM KNGLDVFEAD ARRWARRVAY YRDSLNLKLK SPTVRNVMDM NAFFGGFAAT LASDPVWVMN VIPARKPLTL DVIYDRGLIG VYHDWCEPFS
501: TYPRTYDFIH VSGIESLIKR QDSSKSRCSL VDLMVEMDRI LRPEGKVVIR DSPEVLDKVA RMAHAVRWSS SIHEKEPESH GREKILIATK SLWKLPSNSH

Arabidopsis Description

Probable methyltransferase PMT13 [Source:UniProtKB/Swiss-Prot;Acc:Q93W95]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.