Factsheet for Solyc01g091640.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
mitochondrion 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071375	Potato	mitochondrion	99.33	99.33
VIT_15s0048g01990.t01	Wine grape	mitochondrion	82.47	82.75
AT4G00740.1	Thale cress	golgi	80.97	80.83
Bra000959.1-P	Field mustard	plastid	79.97	80.23
CDX74348	Canola	plastid	79.8	80.07
CDX91893	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	79.63	79.9
CDY07198	Canola	mitochondrion	79.3	79.3
KRH65147	Soybean	endoplasmic reticulum	78.8	79.06
KRH48238	Soybean	endoplasmic reticulum	78.13	78.79
KRH00643	Soybean	endoplasmic reticulum, mitochondrion	78.3	78.69
KRH40535	Soybean	plastid	77.8	78.06
CDY51142	Canola	cytosol	77.13	74.88
GSMUA_Achr5P20080_001	Banana	mitochondrion	72.95	72.47
GSMUA_Achr11P...	Banana	golgi, mitochondrion	70.45	70.33
TraesCS2B01G419000.1	Wheat	golgi, plastid	65.78	68.17
TraesCS2A01G400900.1	Wheat	golgi, mitochondrion	65.28	67.88
TraesCS2D01G398400.1	Wheat	golgi, mitochondrion, plastid	65.44	67.7
Bra037356.1-P	Field mustard	mitochondrion	77.8	67.34
KXG26938	Sorghum	endoplasmic reticulum, golgi, mitochondrion, plastid	65.78	67.24
HORVU6Hr1G056160.1	Barley	cytosol	51.59	66.59
Os04t0569400-00	Rice	golgi, mitochondrion	65.11	66.55
HORVU2Hr1G095160.7	Barley	plastid	65.61	65.61
Zm00001d002631_P003	Maize	endoplasmic reticulum, golgi, mitochondrion, plastid	64.44	64.98
Solyc01g010870.2.1	Tomato	nucleus, unclear	42.07	41.52
Solyc08g075870.2.1	Tomato	nucleus, unclear	41.24	41.37
Solyc05g007490.2.1	Tomato	nucleus, plastid, unclear	41.74	40.85
Solyc08g005490.2.1	Tomato	nucleus, unclear	40.57	40.7
Solyc03g116150.2.1	Tomato	nucleus	39.23	40.24
Solyc06g069870.2.1	Tomato	endoplasmic reticulum	41.24	40.16
Solyc03g026120.2.1	Tomato	plastid	42.74	39.38
Solyc08g077240.2.1	Tomato	nucleus	40.4	39.29
Solyc01g009600.2.1	Tomato	plastid	40.9	38.64
Solyc01g091690.2.1	Tomato	plastid	40.73	38.36
Solyc06g035790.2.1	Tomato	plastid	41.4	38.1
Solyc08g013740.2.1	Tomato	unclear	40.07	38.03
Solyc02g067890.2.1	Tomato	nucleus	36.56	35.9
Solyc09g090190.2.1	Tomato	nucleus	36.23	35.11
Solyc03g005600.2.1	Tomato	nucleus, unclear	35.56	34.35
Solyc06g051000.2.1	Tomato	plastid	35.23	32.87
Solyc10g079450.1.1	Tomato	plasma membrane	33.06	32.41
Solyc05g052970.2.1	Tomato	endoplasmic reticulum	36.06	31.86
Solyc04g058180.2.1	Tomato	plastid	32.72	30.34
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	37.73	29.43
Solyc05g052500.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	35.73	27.44
Solyc05g056580.2.1	Tomato	golgi	37.06	27.31
Solyc02g084670.2.1	Tomato	unclear	37.06	25.14
Solyc04g080360.2.1	Tomato	nucleus	31.72	24.42

Protein Annotations

MapMan:21.3.1.1.2	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016740	GO:GO:0032259	GO:GO:0052546	UniProt:K4AZA4
PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF763	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
EnsemblPlantsGene:Solyc01g091640.2	EnsemblPlants:Solyc01g091640.2.1	TMHMM:TMhelix	UniParc:UPI00027683C3	SEG:seg	:

Description

No Description!

Coordinates

chr1:-:85235714..85242908

Molecular Weight (calculated)

67339.3 Da

IEP (calculated)

8.696

GRAVY (calculated)

-0.178

Length

599 amino acids

Sequence
(BLAST)

001: MGHLNLPSSK RNVRQWRLLD LVSAAFFAAV LIFFLLLCTP LGDSLAASGR QTLLRSASGD PRQRSRLIAQ VESGRHNTAI DACSADYVDY MPCEDPRINS
101: QLSREMNFYR ERHCPLPKDT PLCLIPPTQG YRVPVQWPES LHKIWHENMP YNKIADRKGH QGWMKKEGPY FIFPGGGTMF PDGAEQYIEK LKQYIPIAGG
201: VLRTALDMGC GVASFGGYLL SEEILTLSFA PRDSHKSQIQ FALERGIPAF VAMLGTRRLP FPAFSFDLVH CSRCLIPFTA YNASYFIEVD RLLRPGGHLV
301: ISGPPVQWPK QDKEWADLQT VARSLCYELI VVDGNTAIWK KPQGDSCVPI QNEFGLELCD ESVDPSAAWY FKLKKCVTRT SSSKGEFAIG KIPKWPARLM
401: KAPSRAIVTK NGVDVFEADS RRWARRVAHY KSSLNLKLGT SSVRNVMDMN AFFGGFAAAL SSDPIWVMNV VPAQKPLTLD VIYDRGLIGV YHDWCEPFST
501: YPRTYDLIHV GAIESLIKDP VSGKIRCSLV DLMVEIDRIL RPEGTVIIRD SPEVIDKVER IAPAVRWTAS IHEKEPESHG REKILVATKN FWKLPSSSY

Best Arabidopsis Sequence Match ( AT4G00740.2 )
(BLAST)

001: MGHVNLPASK RGNPRQWRLL DIVTAAFFGI VLLFFILLFT PLGDSMAASG RQTLLLSTAS DPRQRQRLVT LVEAGQHLQP IEYCPAEAVA HMPCEDPRRN
101: SQLSREMNFY RERHCPLPEE TPLCLIPPPS GYKIPVPWPE SLHKIWHANM PYNKIADRKG HQGWMKREGE YFTFPGGGTM FPGGAGQYIE KLAQYIPLNG
201: GTLRTALDMG CGVASFGGTL LSQGILALSF APRDSHKSQI QFALERGVPA FVAMLGTRRL PFPAYSFDLM HCSRCLIPFT AYNATYFIEV DRLLRPGGYL
301: VISGPPVQWP KQDKEWADLQ AVARALCYEL IAVDGNTVIW KKPVGDSCLP SQNEFGLELC DESVPPSDAW YFKLKRCVTR PSSVKGEHAL GTISKWPERL
401: TKVPSRAIVM KNGLDVFEAD ARRWARRVAY YRDSLNLKLK SPTVRNVMDM NAFFGGFAAT LASDPVWVMN VIPARKPLTL DVIYDRGLIG VYHDWCEPFS
501: TYPRTYDFIH VSGIESLIKR QDSSKSRCSL VDLMVEMDRI LRPEGKVVIR DSPEVLDKVA RMAHAVRWSS SIHEKEPESH GREKILIATK SLWKLPSNSH

Arabidopsis Description

Probable methyltransferase PMT13 [Source:UniProtKB/Swiss-Prot;Acc:Q93W95]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.