Factsheet for Solyc10g079450.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g05750.t01	Wine grape	endoplasmic reticulum, plasma membrane	72.01	73.21
GSMUA_Achr3P09140_001	Banana	endoplasmic reticulum, golgi, vacuole	68.58	70.18
KRH72067	Soybean	plastid	68.9	69.82
AT5G04060.1	Thale cress	plasma membrane, plastid	68.41	69.67
CDX70263	Canola	plastid	66.94	69.09
Bra009489.1-P	Field mustard	plastid	66.78	69.04
KRH33118	Soybean	extracellular, golgi, plastid	67.92	68.48
CDY00911	Canola	mitochondrion	65.47	68.38
Bra029822.1-P	Field mustard	mitochondrion, plastid	64.81	67.81
CDY08621	Canola	mitochondrion, plastid	63.67	66.61
Os05t0378800-02	Rice	golgi	65.14	65.57
TraesCS1B01G250100.1	Wheat	plasma membrane	62.03	63.7
Zm00001d009859_P001	Maize	endoplasmic reticulum, golgi, plastid	63.01	63.53
HORVU1Hr1G057520.1	Barley	plastid	62.52	63.24
TraesCS1A01G233500.1	Wheat	endoplasmic reticulum, plasma membrane	61.87	63.0
AT3G10200.2	Thale cress	extracellular, plasma membrane, vacuole	61.7	62.94
TraesCS1D01G238600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	61.54	62.67
OQU77908	Sorghum	plasma membrane, plastid	58.59	57.65
Solyc03g005600.2.1	Tomato	nucleus, unclear	43.04	42.42
Solyc02g067890.2.1	Tomato	nucleus	42.23	42.3
Solyc09g090190.2.1	Tomato	nucleus	42.23	41.75
Solyc08g005490.2.1	Tomato	nucleus, unclear	34.53	35.34
Solyc06g051000.2.1	Tomato	plastid	36.82	35.05
Solyc08g075870.2.1	Tomato	nucleus, unclear	34.21	35.01
Solyc06g069870.2.1	Tomato	endoplasmic reticulum	35.19	34.96
Solyc03g116150.2.1	Tomato	nucleus	33.39	34.93
Solyc05g052970.2.1	Tomato	endoplasmic reticulum	38.63	34.81
Solyc06g035790.2.1	Tomato	plastid	36.17	33.95
Solyc08g077240.2.1	Tomato	nucleus	34.21	33.93
Solyc01g010870.2.1	Tomato	nucleus, unclear	33.39	33.61
Solyc05g007490.2.1	Tomato	nucleus, plastid, unclear	33.55	33.5
Solyc01g091640.2.1	Tomato	nucleus	32.41	33.06
Solyc08g013740.2.1	Tomato	unclear	34.04	32.96
Solyc03g026120.2.1	Tomato	plastid	35.02	32.92
Solyc01g091690.2.1	Tomato	plastid	34.21	32.86
Solyc01g009600.2.1	Tomato	plastid	33.72	32.49
Solyc04g058180.2.1	Tomato	plastid	34.04	32.2
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	38.95	30.99
Solyc05g056580.2.1	Tomato	golgi	36.66	27.55
Solyc05g052500.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	34.7	27.18
Solyc02g084670.2.1	Tomato	unclear	36.01	24.92
Solyc04g080360.2.1	Tomato	nucleus	30.77	24.16

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	UniProt:K4D2I6	PFAM:PF03141
PANTHER:PTHR10108	PANTHER:PTHR10108:SF37	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:Solyc10g079450.1
EnsemblPlants:Solyc10g079450.1.1	TMHMM:TMhelix	UniParc:UPI000276A896	SEG:seg	:	:

Description

No Description!

Coordinates

chr10:+:60985383..60993487

Molecular Weight (calculated)

70371.6 Da

IEP (calculated)

7.084

GRAVY (calculated)

-0.325

Length

611 amino acids

Sequence
(BLAST)

001: MSGSLISSRA FDWYTGQMII IALLVMVGSF YTGTLFGENP SLYIHQEQQQ SENLTVDSNP ISSESSSGIL KFRNKIALSY RVVPLTIPET GINVCPLKFN
101: EYIPCHDISY VKELMPKLDL SRKEELERHC PPLDRRLFCL VPPPADYKIP IRWPTSRDYV WRSNINHTRL AEVKGGQNWV HEKDQLWWFP GGGTHFKHGA
201: TEYIERLGNM TTDETGDLRA AGIYQVLDVG CGVASFSAYL LPLNIETLSF APKDGHENQI QFALERGIGA MISAIATKQL PYPSNSFDMV HCSRCRVDWH
301: ENDGILLKEL NRILRPNGYF IYSAPPAYRK DKDFPEIWDK LVKLTSGMCW KLIAQKVQTA IWVKQENNSC LQHNAQEKLV NLCDSEDDLK PSWKTPLRNC
401: VTLSDASSSL KKLPPRPQRL SEYSQSLSRI GIDREKFLAD TVYWQDQVRH YWRLMNVEEK EIRNVMDMSA SLGGFAVGLN TWPVWVMNVV PITMNDTLSA
501: VYGRGLTGVF HDWCEPFSTY PRTYDLLHAN HLLSHYKNRE EGCLIEDIML EMDRILRPQG FIIIRDEEPI VSRIQALAPK FLWDVELQFL ENHQRKKEPV
601: LFCRKKFWAI A

Best Arabidopsis Sequence Match ( AT5G04060.1 )
(BLAST)

001: MGGGYVLFGS ARSGQMIMVA LVLMVGSFYA GSIFGNNSPI YISQPSSSNS SSSSPSQSGP SNFANKIELT YRRTSVSIPE SGVNVCPLKF NEYIPCHNVT
101: YVQQLLPSLN LSRREELERH CPPLEQRLFC LVPPPKDYKI PIRWPTSRDY VWRSNVNHTH LAEVKGGQNW VHEQGQLWWF PGGGTHFKHG APEYIQRLGN
201: MTTNETGDLL SAGVEQVLDV GCGVASFAAY LLPLGIKTMS FAPKDGHENQ IQFALERGIR AMISAIATKQ MPYPAASFDM VHCSRCRVDW HENDGVLMKE
301: VNRLLRPNGY FVYSAPPAYR KDKDFPVIWD KLVNLTSAMC WKLISRKVQT AIWVKEDDEA CLRKNAELEL ITICGVEDVS KASWKVPLRD CVDISENRQQ
401: KPSSLTDRLS SYPTSLREKG ISEDEFTLDT NFWREQVNQY WELMNVNKTE VRNVMDTNAF IGGFAAAMNS YPLWVMNVVP ATMNDTLSGI YQRGLTGAYH
501: DWCEPFSTYP RTYDLLHADH LFTHYKIYGE GCLLEDIMLE MDRIIRPQGF IIIRDEESIV SRVRDLAPKF LWEVEAHELQ DKYKKTETVL FCRKKFWAIL

Arabidopsis Description

Probable methyltransferase PMT7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZA4]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.