Factsheet for Solyc03g116150.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
mitochondrion 2
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050242	Potato	golgi	95.38	90.42
Solyc06g069870.2.1	Tomato	endoplasmic reticulum	80.82	76.75
VIT_17s0000g06050.t01	Wine grape	cytosol	76.54	73.28
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi	74.49	70.5
KRH63351	Soybean	endoplasmic reticulum	72.6	69.97
GSMUA_Achr3P20050_001	Banana	endoplasmic reticulum, golgi	70.55	69.83
GSMUA_Achr3P01520_001	Banana	endoplasmic reticulum, golgi	69.86	69.15
Solyc05g007490.2.1	Tomato	nucleus, plastid, unclear	71.92	68.63
KRH54546	Soybean	golgi	67.81	68.51
Solyc01g010870.2.1	Tomato	nucleus, unclear	71.06	68.37
TraesCS5D01G234300.1	Wheat	endoplasmic reticulum, golgi	71.23	67.75
TraesCS5A01G226900.1	Wheat	golgi	70.89	67.43
HORVU5Hr1G102720.2	Barley	cytosol	58.9	67.32
TraesCS5B01G225500.1	Wheat	cytosol, endoplasmic reticulum, golgi	70.72	67.26
HORVU5Hr1G065680.2	Barley	cytosol, endoplasmic reticulum, golgi	70.55	67.1
EER96732	Sorghum	endoplasmic reticulum, golgi	70.03	66.18
Os09t0415700-01	Rice	golgi	69.52	65.91
Zm00001d020461_P001	Maize	plasma membrane	69.18	65.69
GSMUA_Achr8P16940_001	Banana	endoplasmic reticulum, golgi	39.73	64.99
Os03t0379100-01	Rice	endoplasmic reticulum, golgi, vacuole	66.61	63.67
EER94782	Sorghum	endoplasmic reticulum, golgi, vacuole	66.44	63.61
TraesCS5D01G429900.1	Wheat	endoplasmic reticulum, golgi, vacuole	66.1	63.07
Solyc08g077240.2.1	Tomato	nucleus	65.92	62.5
TraesCS5B01G423200.2	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	66.1	62.16
TraesCS5A01G421600.2	Wheat	endoplasmic reticulum	66.1	62.16
Zm00001d029336_P002	Maize	cytosol	67.29	57.21
Solyc08g013740.2.1	Tomato	unclear	56.85	52.61
Zm00001d047183_P002	Maize	golgi	55.99	52.4
Solyc06g035790.2.1	Tomato	plastid	55.48	49.77
Solyc03g026120.2.1	Tomato	plastid	55.14	49.54
Solyc01g009600.2.1	Tomato	plastid	53.25	49.05
Solyc01g091690.2.1	Tomato	plastid	52.23	47.96
Solyc08g005490.2.1	Tomato	nucleus, unclear	41.1	40.2
Solyc08g075870.2.1	Tomato	nucleus, unclear	40.41	39.53
Solyc01g091640.2.1	Tomato	nucleus	40.24	39.23
Solyc09g090190.2.1	Tomato	nucleus	38.36	36.25
Solyc02g067890.2.1	Tomato	nucleus	37.5	35.9
Solyc03g005600.2.1	Tomato	nucleus, unclear	37.84	35.65
Solyc10g079450.1.1	Tomato	plasma membrane	34.93	33.39
Solyc06g051000.2.1	Tomato	plastid	35.62	32.4
Solyc05g052970.2.1	Tomato	endoplasmic reticulum	36.47	31.42
Solyc04g058180.2.1	Tomato	plastid	33.22	30.03
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	38.36	29.17
Solyc05g056580.2.1	Tomato	golgi	38.36	27.55
Solyc05g052500.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	36.64	27.44
Solyc02g084670.2.1	Tomato	unclear	38.18	25.25
Solyc04g080360.2.1	Tomato	nucleus	31.16	23.39

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	UniProt:K4BLB7	PFAM:PF03141
PANTHER:PTHR10108	PANTHER:PTHR10108:SF1053	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:Solyc03g116150.2
EnsemblPlants:Solyc03g116150.2.1	TMHMM:TMhelix	UniParc:UPI0002768D35	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:+:65642782..65648467

Molecular Weight (calculated)

66341.9 Da

IEP (calculated)

7.950

GRAVY (calculated)

-0.355

Length

584 amino acids

Sequence
(BLAST)

001: MAIKGNPGDK RSRGPASIFI VAGLCCFFYV IGVWQRGGFA KGDGKSLQIT KKAEDCSILS NLEYETHHGD QHGLVDDPKL KIKQFEPCGE QYVDYTPCHD
101: QMRAMTFPRE NMNYRERHCP PEEEKLHCLI PAPKGYITPF PWPKSREYVP YANAPHKSLT VEKAVQNWVQ LEGDLLRFPG GGTQFPHGAD AYIDQLASVI
201: PMGNGTVRTA LDTGCGVASW GAYLFKKNVI TMSFAPRDSH EAQVQFALER GIPAVIGVLG TIKLPFPSRA FDMAHCSRCL IPWTANRGLY LMEVDRVLRP
301: GGYWILSGPP ISWQTNYKAW QLPKEELEEE QRMIEEITEL LCWEKKYEKA WYKKMEACVT PYPETINLEQ VSGGELKPFP ERLNAIPPRI ASGSLTGVSV
401: ESFQEDNKSW KKHVKAYKRV NKLLDTRRYR NILDMNAGLG SFAAALESSK LWVMNVVPTI AERDTLGIIY DRGLIGIYHD WCEAFSTYPR TYDLIHANGI
501: FSLYKDKCNT EDILLEMDRI LRPEGAVIFR DDVDILGQVK RVVSGMRWKT KMVDHEDGPL ISKKVLFAVK RYWVVGENNS TILR

Best Arabidopsis Sequence Match ( AT1G26850.2 )
(BLAST)

001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH

Arabidopsis Description

Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.