Factsheet for Solyc06g051000.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400077225	Potato	plastid	95.17	95.02
VIT_13s0067g01690.t01	Wine grape	endoplasmic reticulum, golgi	64.33	68.15
KRH31179	Soybean	plasma membrane	60.9	65.82
KRH14916	Soybean	nucleus	60.12	64.87
KRH73268	Soybean	endoplasmic reticulum	59.66	64.37
CDY10370	Canola	cytosol	27.57	64.36
KRG97692	Soybean	plastid	38.01	63.21
AT3G56080.1	Thale cress	endoplasmic reticulum, vacuole	58.57	61.64
Bra000181.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	55.92	61.47
CDY07611	Canola	endoplasmic reticulum, extracellular, vacuole	55.92	61.47
CDY43341	Canola	endoplasmic reticulum, golgi, vacuole	57.63	61.16
AT2G40280.1	Thale cress	extracellular, plasma membrane	56.07	61.12
GSMUA_Achr4P18750_001	Banana	endoplasmic reticulum, golgi	56.23	58.04
Solyc05g052500.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	70.41	57.95
CDX76062	Canola	endoplasmic reticulum, golgi, vacuole	58.26	56.67
Bra014710.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	57.94	55.03
CDY24913	Canola	mitochondrion	55.14	52.68
Os01t0828300-01	Rice	golgi, plastid	54.36	51.78
HORVU1Hr1G070430.8	Barley	golgi, plasma membrane, vacuole	52.49	51.37
TraesCS1D01G294500.1	Wheat	golgi, plasma membrane, plastid	53.27	51.27
TraesCS1B01G305900.1	Wheat	mitochondrion	52.8	50.82
Os05t0472200-01	Rice	endoplasmic reticulum, golgi	51.09	50.38
TraesCS1A01G297000.1	Wheat	golgi	52.02	50.23
TraesCS3A01G348800.1	Wheat	golgi	54.36	49.22
Zm00001d043012_P018	Maize	golgi	53.12	49.06
TraesCS3B01G380800.1	Wheat	plastid	54.21	48.47
TraesCS3D01G342700.1	Wheat	golgi	54.05	48.46
HORVU3Hr1G088050.14	Barley	endoplasmic reticulum, plasma membrane	53.58	45.99
OQU87776	Sorghum	endoplasmic reticulum, golgi	48.44	45.94
Zm00001d010599_P002	Maize	endoplasmic reticulum, plasma membrane, plastid	52.34	45.22
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	45.17	37.76
Solyc05g052970.2.1	Tomato	endoplasmic reticulum	38.94	36.87
Solyc10g079450.1.1	Tomato	plasma membrane	35.05	36.82
Solyc08g075870.2.1	Tomato	nucleus, unclear	34.11	36.68
Solyc02g067890.2.1	Tomato	nucleus	34.58	36.39
Solyc08g005490.2.1	Tomato	nucleus, unclear	33.18	35.68
Solyc03g005600.2.1	Tomato	nucleus, unclear	34.42	35.65
Solyc03g116150.2.1	Tomato	nucleus	32.4	35.62
Solyc09g090190.2.1	Tomato	nucleus	34.27	35.6
Solyc05g056580.2.1	Tomato	golgi	44.7	35.3
Solyc01g091640.2.1	Tomato	nucleus	32.87	35.23
Solyc01g091690.2.1	Tomato	plastid	33.96	34.28
Solyc04g058180.2.1	Tomato	plastid	34.42	34.21
Solyc05g007490.2.1	Tomato	nucleus, plastid, unclear	32.55	34.15
Solyc01g010870.2.1	Tomato	nucleus, unclear	32.09	33.94
Solyc06g069870.2.1	Tomato	endoplasmic reticulum	32.24	33.66
Solyc08g077240.2.1	Tomato	nucleus	32.24	33.6
Solyc02g084670.2.1	Tomato	unclear	46.11	33.52
Solyc01g009600.2.1	Tomato	plastid	32.55	32.97
Solyc03g026120.2.1	Tomato	plastid	33.18	32.77
Solyc06g035790.2.1	Tomato	plastid	33.02	32.57
Solyc08g013740.2.1	Tomato	unclear	31.46	32.01
Solyc04g080360.2.1	Tomato	nucleus	36.6	30.21

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757
GO:GO:0016740	GO:GO:0032259	UniProt:K4C5P3	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF887
InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:Solyc06g051000.2	EnsemblPlants:Solyc06g051000.2.1	TMHMM:TMhelix
UniParc:UPI0002766D03	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6:+:34100069..34103246

Molecular Weight (calculated)

73731.7 Da

IEP (calculated)

8.736

GRAVY (calculated)

-0.302

Length

642 amino acids

Sequence
(BLAST)

001: MAISSSSSMQ DMFKQRKYPF IFSLFLLLIF VTFLLISNSQ KSPIFAAIDF AQRAALIKSV PEFNPNTITT SNSTNLHQSD ENNNTSINRE SLLNNVRIDP
101: ETSNVPLKIN PELTDTAIRD ELETFSYHWK LCPGPLAVDY IPCLDNWKAI KKIKSRRHME HRERHCPVPS PRCLVPLPKG YKLPLPWPKS RDMIWYDNVP
201: HPKLVEYKKD QNWVKKSGDY FVFPGGGTQF RDGVNHYIEF IEETFPTIQW GKSIRVLLDV GCGVASFGGY LLDKNVITMS FAPKDEHEAQ IQFALERGIP
301: ATLSVIATKK LAFPDNVYDM IHCARCRVHW HADGGRPLME LNRILRPGGY FIWSATPVYK KDEGHKNVWK VMVNLTEAMC WKMVARTFFK RGRVGLVIYQ
401: KSDSSSCYEN RKENIPPMCD QKKNRLNSSW YTPLDNCLLP LASSSYKWPA PWPQRLNTKP LSLSLETDAE ETFNQDTRHW ASLVSDVYLG SLAINWSSVR
501: NVMDMNAGYG GLATALIDRS LWVMNVVPIS GPDTLPIIFD RGLVGTYHDW CESFNTYPRT YDLLHSSFLF GNFSQRCDLV DVAVEMDRIV RPGGYILVQD
601: TLQMIKQLGS ILRSLHWSVT LYQHQFLVGK KDFWRPKDIA RE

Best Arabidopsis Sequence Match ( AT3G56080.1 )
(BLAST)

001: MIKNIFQSRK LSGLCVLSIL LVSVTILLLT NDTIDLFPYL SLPYLPRSSL SVIPTSTPIS SPTNDSSPPL ESPVNQTRVD DHPDDQGLEL DWLKDDKQWN
101: VSLKIDWKRC ESPDYIPCLD NTKAIKKLKS KRNMEHRERH CPERSPKCLV PLPQHYKVPL PWPQSRDMIW YDNVPHPKLV EYKKDQNWVR KSGPFFVFPG
201: GGTQFKDGVI HYINFIQKTL PILDWGKKVR VVLDVGCGVA SFGGTLLDKN VITMSFAPKD EHEAQIQFAL ERGIPATLAV IGTQKLPFPD NAYDVIHCAR
301: CRVHWHGYGG RPLLELNRVL RPGGFFVWSA TPVYQHDEGH RNVWKTMESL TTSMCWKVVA RTRFTKVGFV IYQKPDSDSC YESRKNKDPP LCIEEETKKN
401: SSWYTPLLTC LPKLPVSPIG KWPSGWPERL TETPVSLFRE QRSEESFRED SKLWSGVMSN IYLYSLAINW TRIHNVMDMN AGYGGFAAAL INKPLWVMNV
501: IPVEGEDTLS TIFDRGLIGI YHDWCESFNT YPRSYDLLHS SFLFTNLSQR CDLMEVVVEI DRILRPGGYL AVQDTVEMLK KLNPILLSLR WSTNLYRGKF
601: LVGLKSSWRP

Arabidopsis Description

Probable methyltransferase PMT22 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYN3]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.