Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 4
- plasma membrane 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000181.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 87.44 | 88.18 |
| CDY07611 | Canola | endoplasmic reticulum, extracellular, vacuole | 87.44 | 88.18 |
| CDY10370 | Canola | cytosol | 40.92 | 87.64 |
| CDY24913 | Canola | mitochondrion | 86.76 | 76.04 |
| VIT_13s0067g01690.t01 | Wine grape | endoplasmic reticulum, golgi | 66.72 | 64.85 |
| KRH14916 | Soybean | nucleus | 64.86 | 64.2 |
| KRH31179 | Soybean | plasma membrane | 64.52 | 63.97 |
| KRH73268 | Soybean | endoplasmic reticulum | 64.35 | 63.7 |
| KRG97692 | Soybean | plastid | 41.43 | 63.21 |
| PGSC0003DMT400069743 | Potato | endoplasmic reticulum, golgi | 64.35 | 61.83 |
| AT3G56080.1 | Thale cress | endoplasmic reticulum, vacuole | 60.1 | 58.03 |
| PGSC0003DMT400077225 | Potato | plastid | 61.46 | 56.3 |
| GSMUA_Achr4P18750_001 | Banana | endoplasmic reticulum, golgi | 59.25 | 56.11 |
| Solyc06g051000.2.1 | Tomato | plastid | 61.12 | 56.07 |
| Os01t0828300-01 | Rice | golgi, plastid | 59.93 | 52.37 |
| Os05t0472200-01 | Rice | endoplasmic reticulum, golgi | 56.88 | 51.46 |
| TraesCS1D01G294500.1 | Wheat | golgi, plasma membrane, plastid | 58.23 | 51.42 |
| HORVU1Hr1G070430.8 | Barley | golgi, plasma membrane, vacuole | 57.05 | 51.22 |
| TraesCS1B01G305900.1 | Wheat | mitochondrion | 57.73 | 50.97 |
| TraesCS1A01G297000.1 | Wheat | golgi | 56.54 | 50.08 |
| Zm00001d043012_P018 | Maize | golgi | 59.08 | 50.07 |
| TraesCS3A01G348800.1 | Wheat | golgi | 58.74 | 48.8 |
| Solyc05g052500.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 64.35 | 48.59 |
| TraesCS3B01G380800.1 | Wheat | plastid | 59.08 | 48.47 |
| TraesCS3D01G342700.1 | Wheat | golgi | 58.74 | 48.32 |
| HORVU3Hr1G088050.14 | Barley | endoplasmic reticulum, plasma membrane | 58.74 | 46.26 |
| OQU87776 | Sorghum | endoplasmic reticulum, golgi | 52.8 | 45.94 |
| Zm00001d010599_P002 | Maize | endoplasmic reticulum, plasma membrane, plastid | 55.52 | 44.01 |
| AT2G34300.3 | Thale cress | endoplasmic reticulum, golgi, vacuole | 51.44 | 39.35 |
| AT1G29470.1 | Thale cress | golgi | 49.92 | 38.18 |
| AT1G31850.3 | Thale cress | cytosol, endoplasmic reticulum, golgi | 38.54 | 37.65 |
| AT4G19120.2 | Thale cress | cytosol, endoplasmic reticulum, golgi | 38.03 | 37.33 |
| AT3G23300.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 37.18 | 35.84 |
| AT5G64030.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 50.25 | 35.71 |
| AT4G14360.2 | Thale cress | endoplasmic reticulum, golgi | 36.84 | 35.69 |
| AT5G14430.1 | Thale cress | endoplasmic reticulum | 37.01 | 35.62 |
| AT4G00740.1 | Thale cress | golgi | 35.65 | 35.0 |
| AT1G77260.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 38.88 | 34.96 |
| AT5G04060.1 | Thale cress | plasma membrane, plastid | 35.48 | 34.83 |
| AT2G39750.1 | Thale cress | endoplasmic reticulum, golgi | 40.75 | 34.58 |
| AT1G04430.1 | Thale cress | endoplasmic reticulum, golgi | 36.5 | 34.51 |
| AT2G43200.2 | Thale cress | endoplasmic reticulum, golgi | 35.48 | 34.21 |
| AT5G06050.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 39.56 | 34.16 |
| AT4G10440.1 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 36.33 | 33.81 |
| AT3G10200.2 | Thale cress | extracellular, plasma membrane, vacuole | 33.96 | 33.39 |
| AT1G19430.1 | Thale cress | mitochondrion | 40.92 | 33.29 |
| AT3G51070.1 | Thale cress | extracellular, mitochondrion, plasma membrane, plastid, vacuole | 50.42 | 33.18 |
| AT1G33170.1 | Thale cress | cytosol | 35.65 | 32.86 |
| AT2G45750.1 | Thale cress | endoplasmic reticulum, golgi | 35.14 | 32.81 |
| AT4G18030.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 34.3 | 32.53 |
| AT1G26850.2 | Thale cress | endoplasmic reticulum, golgi | 33.79 | 32.31 |
| AT4G00750.1 | Thale cress | mitochondrion | 34.63 | 32.23 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.1 | EntrezGene:818620 | ProteinID:AAD25663.2 | ProteinID:AAD25943.1 | ProteinID:AEC09806.1 |
| ArrayExpress:AT2G40280 | EnsemblPlantsGene:AT2G40280 | RefSeq:AT2G40280 | TAIR:AT2G40280 | RefSeq:AT2G40280-TAIR-G | EnsemblPlants:AT2G40280.1 |
| TAIR:AT2G40280.1 | EMBL:AY059871 | EMBL:AY093322 | Unigene:At.11144 | GO:GO:0000139 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 |
| GO:GO:0005794 | GO:GO:0005802 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008757 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0032259 | RefSeq:NP_565926.1 | PFAM:PF03141 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR10108 | PANTHER:PTHR10108:SF887 | InterPro:Put_SAM_MeTrfase | UniProt:Q9SIZ3 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 |
| TMHMM:TMhelix | UniParc:UPI00000A4351 | : | : | : | : |
Description
Probable methyltransferase PMT23 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIZ3]
Coordinates
chr2:-:16825495..16828505
Molecular Weight (calculated)
66776.6 Da
IEP (calculated)
8.451
GRAVY (calculated)
-0.216
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISVQHVVV LLLSTLLIAI TFFLFTSDNA RFPFPSLSTT DYYTPIPKSP IPHRIVDVSS DQTPQKMKLN TSLEVGELKW DLCKGAESVD YIPCLDNYAA
101: IKQLKSRRHM EHRERHCPEP SPKCLLPLPD NYKPPVPWPK SRDMIWYDNV PHPKLVEYKK EQNWVKKEGE FLVFPGGGTQ FKFGVTHYVE FIEKALPSIK
201: WGKNIRVVLD VGCGVASFGG SLLDKDVITM SFAPKDEHEA QIQFALERGI PATLSVIGTQ QLTFPSNAFD LIHCARCRVH WDADGGKPLL ELNRVLRPGG
301: FFIWSATPVY RDNDRDSRIW NEMVSLTKSI CWKVVTKTVD SSGIGLVIYQ KPTSESCYNK RSTQDPPLCD KKEANGSWYV PLAKCLSKLP SGNVQSWPEL
401: WPKRLVSVKP QSISVKAETL KKDTEKWSAS VSDVYLKHLA VNWSTVRNVM DMNAGFGGFA AALINLPLWV MNVVPVDKPD TLSVVYDRGL IGVYHDWCES
501: VNTYPRTYDL LHSSFLLGDL TQRCEIVQVV AEIDRIVRPG GYLVVQDNME TIMKLESILG SLHWSTKIYE DRFLVGRKGF WRPAKPELR
101: IKQLKSRRHM EHRERHCPEP SPKCLLPLPD NYKPPVPWPK SRDMIWYDNV PHPKLVEYKK EQNWVKKEGE FLVFPGGGTQ FKFGVTHYVE FIEKALPSIK
201: WGKNIRVVLD VGCGVASFGG SLLDKDVITM SFAPKDEHEA QIQFALERGI PATLSVIGTQ QLTFPSNAFD LIHCARCRVH WDADGGKPLL ELNRVLRPGG
301: FFIWSATPVY RDNDRDSRIW NEMVSLTKSI CWKVVTKTVD SSGIGLVIYQ KPTSESCYNK RSTQDPPLCD KKEANGSWYV PLAKCLSKLP SGNVQSWPEL
401: WPKRLVSVKP QSISVKAETL KKDTEKWSAS VSDVYLKHLA VNWSTVRNVM DMNAGFGGFA AALINLPLWV MNVVPVDKPD TLSVVYDRGL IGVYHDWCES
501: VNTYPRTYDL LHSSFLLGDL TQRCEIVQVV AEIDRIVRPG GYLVVQDNME TIMKLESILG SLHWSTKIYE DRFLVGRKGF WRPAKPELR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.