Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15505 | Canola | endoplasmic reticulum, golgi | 92.13 | 92.58 |
| CDY18232 | Canola | endoplasmic reticulum, golgi, plasma membrane | 92.13 | 92.58 |
| CDX89824 | Canola | endoplasmic reticulum, golgi | 91.81 | 92.26 |
| Bra030570.1-P | Field mustard | endoplasmic reticulum, golgi | 91.81 | 92.26 |
| CDX86634 | Canola | endoplasmic reticulum, golgi | 91.65 | 92.1 |
| Bra015316.1-P | Field mustard | endoplasmic reticulum, golgi | 91.97 | 91.97 |
| AT4G14360.2 | Thale cress | endoplasmic reticulum, golgi | 79.78 | 81.74 |
| AT3G23300.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 78.49 | 80.03 |
| GSMUA_Achr6P36560_001 | Banana | endoplasmic reticulum, golgi, vacuole | 73.52 | 73.87 |
| GSMUA_Achr1P20520_001 | Banana | endoplasmic reticulum, golgi, vacuole | 73.35 | 73.59 |
| Zm00001d032703_P006 | Maize | endoplasmic reticulum, golgi, vacuole | 70.95 | 72.58 |
| OQU91634 | Sorghum | endoplasmic reticulum, golgi | 70.95 | 71.75 |
| GSMUA_Achr5P21350_001 | Banana | endoplasmic reticulum | 71.27 | 71.5 |
| TraesCS1D01G153300.1 | Wheat | endoplasmic reticulum, golgi | 70.63 | 71.43 |
| TraesCS1B01G170600.2 | Wheat | endoplasmic reticulum, golgi | 70.47 | 71.27 |
| Os10t0477100-01 | Rice | golgi | 70.47 | 71.15 |
| TraesCS1A01G154400.2 | Wheat | golgi | 69.02 | 68.36 |
| Zm00001d014036_P002 | Maize | endoplasmic reticulum | 70.95 | 67.58 |
| AT5G14430.1 | Thale cress | endoplasmic reticulum | 57.95 | 58.99 |
| AT5G04060.1 | Thale cress | plasma membrane, plastid | 39.65 | 41.17 |
| AT3G10200.2 | Thale cress | extracellular, plasma membrane, vacuole | 37.08 | 38.56 |
| AT1G77260.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 40.13 | 38.17 |
| AT1G26850.2 | Thale cress | endoplasmic reticulum, golgi | 37.08 | 37.5 |
| AT2G45750.1 | Thale cress | endoplasmic reticulum, golgi | 37.56 | 37.08 |
| AT4G00750.1 | Thale cress | mitochondrion | 37.56 | 36.97 |
| AT5G06050.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 39.97 | 36.51 |
| AT2G40280.1 | Thale cress | extracellular, plasma membrane | 34.51 | 36.5 |
| AT2G43200.2 | Thale cress | endoplasmic reticulum, golgi | 35.79 | 36.5 |
| AT4G19120.2 | Thale cress | cytosol, endoplasmic reticulum, golgi | 34.83 | 36.17 |
| AT4G00740.1 | Thale cress | golgi | 34.83 | 36.17 |
| AT2G39750.1 | Thale cress | endoplasmic reticulum, golgi | 39.97 | 35.88 |
| AT4G10440.1 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 36.12 | 35.55 |
| AT1G33170.1 | Thale cress | cytosol | 36.44 | 35.52 |
| AT3G56080.1 | Thale cress | endoplasmic reticulum, vacuole | 33.87 | 34.59 |
| AT1G31850.3 | Thale cress | cytosol, endoplasmic reticulum, golgi | 32.91 | 34.0 |
| AT4G18030.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 33.55 | 33.66 |
| AT1G29470.1 | Thale cress | golgi | 38.68 | 31.3 |
| AT2G34300.3 | Thale cress | endoplasmic reticulum, golgi, vacuole | 37.72 | 30.52 |
| AT5G64030.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 39.33 | 29.55 |
| AT1G19430.1 | Thale cress | mitochondrion | 31.3 | 26.93 |
| AT3G51070.1 | Thale cress | extracellular, mitochondrion, plasma membrane, plastid, vacuole | 38.2 | 26.59 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.1 | EntrezGene:839522 | UniProt:A0A178W2D5 | ProteinID:AAB70432.1 | ProteinID:AEE27696.1 |
| ProteinID:AEE27697.1 | EMBL:AF387011 | EMBL:AK222007 | ProteinID:ANM58680.1 | ArrayExpress:AT1G04430 | EnsemblPlantsGene:AT1G04430 |
| RefSeq:AT1G04430 | TAIR:AT1G04430 | RefSeq:AT1G04430-TAIR-G | EnsemblPlants:AT1G04430.1 | TAIR:AT1G04430.1 | EMBL:AY054530 |
| EMBL:AY064624 | EMBL:AY081460 | EMBL:AY084457 | Unigene:At.19913 | GO:GO:0000139 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0008757 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0032259 |
| RefSeq:NP_001117225.1 | RefSeq:NP_001321096.1 | RefSeq:NP_563706.1 | ProteinID:OAP12669.1 | PFAM:PF03141 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR10108 | PANTHER:PTHR10108:SF704 |
| InterPro:Put_SAM_MeTrfase | UniProt:Q940J9 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | TMHMM:TMhelix | UniParc:UPI000009D80A |
| SEG:seg | : | : | : | : | : |
Description
Probable methyltransferase PMT8 [Source:UniProtKB/Swiss-Prot;Acc:Q940J9]
Coordinates
chr1:+:1197956..1201579
Molecular Weight (calculated)
70511.9 Da
IEP (calculated)
6.562
GRAVY (calculated)
-0.405
Length
623 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRGRSDGGL KKRLIASVCV VALFVCFLFM YYGSSSQGAS ALEYGRSLRK LGSSYLSGDD DNGDTKQDDS VANAEDSLVV AKSFPVCDDR HSEIIPCLDR
101: NFIYQMRLKL DLSLMEHYER HCPPPERRFN CLIPPPSGYK VPIKWPKSRD EVWKANIPHT HLAKEKSDQN WMVEKGEKIS FPGGGTHFHY GADKYIASIA
201: NMLNFSNDVL NDEGRLRTVL DVGCGVASFG AYLLASDIMT MSLAPNDVHQ NQIQFALERG IPAYLGVLGT KRLPYPSRSF EFAHCSRCRI DWLQRDGLLL
301: LELDRVLRPG GYFAYSSPEA YAQDEENLKI WKEMSALVER MCWRIAVKRN QTVVWQKPLS NDCYLEREPG TQPPLCRSDA DPDAVAGVSM EACITPYSKH
401: DHKTKGSGLA PWPARLTSSP PRLADFGYST DMFEKDTELW KQQVDSYWNL MSSKVKSNTV RNIMDMKAHM GSFAAALKDK DVWVMNVVSP DGPNTLKLIY
501: DRGLIGTNHN WCEAFSTYPR TYDLLHAWSI FSDIKSKGCS AEDLLIEMDR ILRPTGFVII RDKQSVVESI KKYLQALHWE TVASEKVNTS SELDQDSEDG
601: ENNVVFIVQK KLWLTSESLR DSE
101: NFIYQMRLKL DLSLMEHYER HCPPPERRFN CLIPPPSGYK VPIKWPKSRD EVWKANIPHT HLAKEKSDQN WMVEKGEKIS FPGGGTHFHY GADKYIASIA
201: NMLNFSNDVL NDEGRLRTVL DVGCGVASFG AYLLASDIMT MSLAPNDVHQ NQIQFALERG IPAYLGVLGT KRLPYPSRSF EFAHCSRCRI DWLQRDGLLL
301: LELDRVLRPG GYFAYSSPEA YAQDEENLKI WKEMSALVER MCWRIAVKRN QTVVWQKPLS NDCYLEREPG TQPPLCRSDA DPDAVAGVSM EACITPYSKH
401: DHKTKGSGLA PWPARLTSSP PRLADFGYST DMFEKDTELW KQQVDSYWNL MSSKVKSNTV RNIMDMKAHM GSFAAALKDK DVWVMNVVSP DGPNTLKLIY
501: DRGLIGTNHN WCEAFSTYPR TYDLLHAWSI FSDIKSKGCS AEDLLIEMDR ILRPTGFVII RDKQSVVESI KKYLQALHWE TVASEKVNTS SELDQDSEDG
601: ENNVVFIVQK KLWLTSESLR DSE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.