Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 2
- vacuole 3
- plasma membrane 2
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84330 | Canola | endoplasmic reticulum, plasma membrane | 83.51 | 90.18 |
| CDY17234 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 86.1 | 87.01 |
| Bra005438.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 85.97 | 86.88 |
| AT1G29470.1 | Thale cress | golgi | 83.38 | 83.38 |
| Os12t0178300-00 | Rice | cytosol | 21.95 | 63.77 |
| GSMUA_Achr8P32550_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 54.55 | 62.78 |
| GSMUA_Achr7P23260_001 | Banana | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 58.83 | 62.05 |
| Os04t0692400-01 | Rice | mitochondrion, peroxisome | 51.56 | 58.64 |
| Zm00001d002943_P002 | Maize | plasma membrane | 51.04 | 58.57 |
| Solyc04g063230.2.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 57.92 | 58.07 |
| EES03991 | Sorghum | plastid | 58.96 | 57.4 |
| Zm00001d012211_P008 | Maize | plastid | 58.96 | 57.32 |
| EES11713 | Sorghum | plastid | 52.34 | 57.08 |
| TraesCS2D01G569900.1 | Wheat | plastid | 51.82 | 56.76 |
| TraesCS3B01G439800.3 | Wheat | cytosol, golgi, mitochondrion, plastid, vacuole | 59.09 | 56.66 |
| GSMUA_Achr8P30140_001 | Banana | nucleus | 57.92 | 56.6 |
| Os01t0883900-02 | Rice | golgi, mitochondrion, plasma membrane, vacuole | 59.22 | 56.58 |
| TraesCSU01G022400.1 | Wheat | plastid | 51.69 | 56.45 |
| TraesCS3D01G401300.2 | Wheat | golgi | 58.83 | 56.41 |
| PGSC0003DMT400006139 | Potato | nucleus | 58.18 | 56.21 |
| HORVU3Hr1G090970.1 | Barley | cytosol, golgi, mitochondrion, plastid, vacuole | 58.96 | 56.19 |
| TraesCS3A01G406100.1 | Wheat | plastid | 58.83 | 56.06 |
| AT5G64030.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 60.26 | 55.97 |
| VIT_18s0001g01270.t01 | Wine grape | plasma membrane | 63.64 | 55.81 |
| TraesCS2A01G560300.1 | Wheat | mitochondrion, peroxisome, plastid | 51.17 | 53.24 |
| KRH64591 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 57.27 | 52.88 |
| KRH53330 | Soybean | endoplasmic reticulum | 56.75 | 52.34 |
| GSMUA_Achr11P... | Banana | mitochondrion | 56.23 | 51.98 |
| HORVU2Hr1G127220.1 | Barley | cytosol | 52.34 | 51.87 |
| AT2G40280.1 | Thale cress | extracellular, plasma membrane | 39.35 | 51.44 |
| GSMUA_Achr8P08230_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 57.27 | 50.29 |
| AT3G51070.1 | Thale cress | extracellular, mitochondrion, plasma membrane, plastid, vacuole | 55.84 | 48.04 |
| AT3G56080.1 | Thale cress | endoplasmic reticulum, vacuole | 37.79 | 47.7 |
| Os11t0186300-01 | Rice | plasma membrane | 53.25 | 47.29 |
| HORVU4Hr1G017470.1 | Barley | vacuole | 53.51 | 46.19 |
| TraesCS4A01G220000.1 | Wheat | golgi | 53.51 | 46.09 |
| TraesCS4D01G094600.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole | 53.38 | 46.02 |
| TraesCS4B01G098500.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 53.51 | 45.98 |
| EES08114 | Sorghum | golgi, mitochondrion, plastid, vacuole | 52.73 | 45.41 |
| Zm00001d004720_P001 | Maize | golgi | 52.73 | 44.81 |
| HORVU5Hr1G037320.6 | Barley | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 51.95 | 42.92 |
| TraesCS5D01G127100.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 52.73 | 39.92 |
| TraesCS5B01G120300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 52.47 | 39.65 |
| AT4G14360.2 | Thale cress | endoplasmic reticulum, golgi | 31.3 | 39.64 |
| AT1G77260.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 33.25 | 39.08 |
| AT4G19120.2 | Thale cress | cytosol, endoplasmic reticulum, golgi | 30.39 | 39.0 |
| TraesCS5A01G114100.1 | Wheat | endoplasmic reticulum | 52.47 | 38.88 |
| AT3G23300.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 30.78 | 38.79 |
| AT5G06050.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 34.16 | 38.56 |
| Zm00001d041844_P021 | Maize | golgi, mitochondrion, nucleus, plasma membrane, plastid | 52.73 | 38.45 |
| AT5G14430.1 | Thale cress | endoplasmic reticulum | 30.39 | 38.24 |
| AT5G04060.1 | Thale cress | plasma membrane, plastid | 29.74 | 38.17 |
| KXG23110 | Sorghum | endoplasmic reticulum | 53.51 | 37.87 |
| AT1G04430.1 | Thale cress | endoplasmic reticulum, golgi | 30.52 | 37.72 |
| AT1G19430.1 | Thale cress | mitochondrion | 35.32 | 37.57 |
| AT4G10440.1 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 30.52 | 37.12 |
| AT1G31850.3 | Thale cress | cytosol, endoplasmic reticulum, golgi | 28.96 | 36.98 |
| AT1G26850.2 | Thale cress | endoplasmic reticulum, golgi | 29.48 | 36.85 |
| AT2G39750.1 | Thale cress | endoplasmic reticulum, golgi | 32.99 | 36.6 |
| AT4G00740.1 | Thale cress | golgi | 28.44 | 36.5 |
| AT1G33170.1 | Thale cress | cytosol | 29.61 | 35.68 |
| AT3G10200.2 | Thale cress | extracellular, plasma membrane, vacuole | 27.66 | 35.56 |
| AT4G18030.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 27.92 | 34.62 |
| AT4G00750.1 | Thale cress | mitochondrion | 28.05 | 34.12 |
| AT2G45750.1 | Thale cress | endoplasmic reticulum, golgi | 27.79 | 33.91 |
| AT2G43200.2 | Thale cress | endoplasmic reticulum, golgi | 26.88 | 33.88 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.1 | EntrezGene:817991 | UniProt:A0A178VZB0 | ProteinID:AAC27406.1 | ProteinID:AEC08950.1 |
| ProteinID:AEC08951.1 | EMBL:AK227732 | EMBL:AK317495 | ProteinID:ANM62567.1 | ArrayExpress:AT2G34300 | EnsemblPlantsGene:AT2G34300 |
| RefSeq:AT2G34300 | TAIR:AT2G34300 | RefSeq:AT2G34300-TAIR-G | EnsemblPlants:AT2G34300.3 | Unigene:At.43122 | ncoils:Coil |
| GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0008757 | GO:GO:0009506 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0032259 | RefSeq:NP_001031477.1 | RefSeq:NP_001324716.1 | RefSeq:NP_180977.1 | ProteinID:OAP11607.1 | PFAM:PF03141 |
| PANTHER:PTHR10108 | PANTHER:PTHR10108:SF1056 | InterPro:Put_SAM_MeTrfase | UniProt:Q0WT31 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 |
| TMHMM:TMhelix | UniParc:UPI00000A1AF4 | SEG:seg | : | : | : |
Description
Probable methyltransferase PMT25 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT31]
Coordinates
chr2:-:14473651..14477520
Molecular Weight (calculated)
86885.6 Da
IEP (calculated)
5.062
GRAVY (calculated)
-0.753
Length
770 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMGKYSRVD GKKSSSYGLT ITIVLLLSLC LVGTWMFMSS WSAPADSAGY SSTDTAKDVS KNDLRKEEGD RDPKNFSDEK NEENEAATEN NQVKTDSENS
101: AEGNQVNESS GEKTEAGEER KESDDNNGDG DGEKEKNVKE VGSESDETTQ KEKTQLEEST EENKSEDGNG NEEKAEENAS ETEESTEKSS KEVFPAGDQA
201: EITKESSTGD GAWSTQLVES QNEKKAQQSS ISKDQSSYGW KTCNVTAGPD YIPCLDNWQA IKKLHTTMHY EHRERHCPEE SPHCLVSLPD GYKRSIKWPK
301: SREKIWYNNV PHTKLAEIKG HQNWVKMSGE HLTFPGGGTQ FKNGALHYID FIQQSHPAIA WGNRTRVILD VGCGVASFGG YLFERDVLAL SFAPKDEHEA
401: QVQFALERGI PAMLNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKNEEDSGIW KAMSELTKAM CWKLVTIKKD
501: KLNEVGAAIY QKPTSNKCYN KRPQNEPPLC KDSDDQNAAW NVPLEACMHK VTEDSSKRGA VWPNMWPERV ETAPEWLDSQ EGVYGKPAPE DFTADQEKWK
601: TIVSKAYLND MGIDWSNVRN VMDMRAVYGG FAAALKDLKL WVMNVVPVDA PDTLPIIYER GLFGIYHDWC ESFNTYPRTY DLLHADHLFS TLRKRCNLVS
701: VMAEIDRILR PQGTFIIRDD METLGEVEKM VKSMKWKVKM TQSKDNEGLL SIEKSWWRPE ETETIKSAIA
101: AEGNQVNESS GEKTEAGEER KESDDNNGDG DGEKEKNVKE VGSESDETTQ KEKTQLEEST EENKSEDGNG NEEKAEENAS ETEESTEKSS KEVFPAGDQA
201: EITKESSTGD GAWSTQLVES QNEKKAQQSS ISKDQSSYGW KTCNVTAGPD YIPCLDNWQA IKKLHTTMHY EHRERHCPEE SPHCLVSLPD GYKRSIKWPK
301: SREKIWYNNV PHTKLAEIKG HQNWVKMSGE HLTFPGGGTQ FKNGALHYID FIQQSHPAIA WGNRTRVILD VGCGVASFGG YLFERDVLAL SFAPKDEHEA
401: QVQFALERGI PAMLNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKNEEDSGIW KAMSELTKAM CWKLVTIKKD
501: KLNEVGAAIY QKPTSNKCYN KRPQNEPPLC KDSDDQNAAW NVPLEACMHK VTEDSSKRGA VWPNMWPERV ETAPEWLDSQ EGVYGKPAPE DFTADQEKWK
601: TIVSKAYLND MGIDWSNVRN VMDMRAVYGG FAAALKDLKL WVMNVVPVDA PDTLPIIYER GLFGIYHDWC ESFNTYPRTY DLLHADHLFS TLRKRCNLVS
701: VMAEIDRILR PQGTFIIRDD METLGEVEKM VKSMKWKVKM TQSKDNEGLL SIEKSWWRPE ETETIKSAIA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.