Factsheet for Zm00001d041844_P021

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, plasma membrane, golgi, nucleus

Predictor Summary:

plastid 1
golgi 1
mitochondrion 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG23110	Sorghum	endoplasmic reticulum	85.89	83.36
Os12t0178300-00	Rice	cytosol	18.47	73.58
CDY43336	Canola	cytosol	11.93	65.62
Zm00001d002943_P002	Maize	plasma membrane	40.44	63.64
Bra010830.1-P	Field mustard	golgi	38.54	59.68
CDX90190	Canola	golgi, mitochondrion, plasma membrane, plastid, vacuole	38.54	59.24
HORVU5Hr1G037320.6	Barley	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid	52.08	59.01
CDY31339	Canola	plasma membrane	42.05	58.12
CDY39830	Canola	plasma membrane	42.23	57.77
CDX84330	Canola	endoplasmic reticulum, plasma membrane	38.64	57.22
Zm00001d004720_P001	Maize	golgi	48.96	57.06
Zm00001d012211_P008	Maize	plastid	42.14	56.19
CDX99828	Canola	golgi	39.58	55.73
KRH53915	Soybean	endoplasmic reticulum	42.52	55.71
TraesCS5B01G120300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	53.6	55.54
CDY43782	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	41.95	55.44
KRH64022	Soybean	endoplasmic reticulum	42.52	55.43
CDY44314	Canola	endoplasmic reticulum	39.02	55.38
CDX94669	Canola	endoplasmic reticulum	39.2	55.27
TraesCS5D01G127100.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	53.22	55.26
Bra032319.1-P	Field mustard	cytosol	39.39	55.25
PGSC0003DMT400059933	Potato	golgi	42.52	55.23
Bra030140.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	39.2	55.2
CDY48339	Canola	cytosol	39.49	55.16
AT5G64030.1	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	43.28	55.13
Solyc05g056580.2.1	Tomato	golgi	42.42	55.1
VIT_04s0044g01670.t01	Wine grape	cytosol	42.9	54.91
CDY17234	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	39.49	54.72
Bra005438.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	39.39	54.59
TraesCS5A01G114100.1	Wheat	endoplasmic reticulum	53.69	54.57
KRH59591	Soybean	golgi, mitochondrion, plasma membrane, plastid, vacuole	42.8	54.39
AT1G29470.1	Thale cress	golgi	39.58	54.29
CDY66721	Canola	golgi	27.18	54.25
CDX84478	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	42.8	53.81
KRH40943	Soybean	golgi	42.61	53.44
AT2G34300.3	Thale cress	endoplasmic reticulum, golgi, vacuole	38.45	52.73
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	37.69	51.82
KRH64591	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	39.49	50.0
PGSC0003DMT400006139	Potato	nucleus	37.69	49.94
KRH53330	Soybean	endoplasmic reticulum	39.39	49.82
VIT_18s0001g01270.t01	Wine grape	plasma membrane	41.29	49.66
Bra024260.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	41.76	47.22
Zm00001d043012_P018	Maize	golgi	27.37	41.58
Zm00001d012400_P007	Maize	plasma membrane	24.34	39.66
Zm00001d032703_P006	Maize	endoplasmic reticulum, golgi, vacuole	22.82	39.57
Zm00001d036423_P002	Maize	mitochondrion	29.26	37.59
Zm00001d010599_P002	Maize	endoplasmic reticulum, plasma membrane, plastid	26.42	37.55
Zm00001d002631_P003	Maize	endoplasmic reticulum, golgi, mitochondrion, plastid	21.02	37.37
Zm00001d042883_P001	Maize	mitochondrion, plastid	24.53	37.27
Zm00001d020461_P001	Maize	plasma membrane	21.59	37.07
Zm00001d009859_P001	Maize	endoplasmic reticulum, golgi, plastid	21.21	36.96
Zm00001d035876_P002	Maize	cytosol	21.59	36.77
Zm00001d014036_P002	Maize	endoplasmic reticulum	22.73	36.7
Zm00001d034250_P002	Maize	mitochondrion	25.09	36.25
Zm00001d051442_P002	Maize	plasma membrane	22.06	36.01
Zm00001d002625_P003	Maize	mitochondrion	21.4	35.42
Zm00001d026079_P001	Maize	plastid	21.31	35.1
Zm00001d030012_P001	Maize	golgi	19.98	34.93
Zm00001d032476_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, peroxisome	15.81	34.5
Zm00001d036545_P001	Maize	golgi	17.52	33.88
Zm00001d042499_P001	Maize	plastid	20.08	33.54
Zm00001d007592_P001	Maize	extracellular, golgi	15.81	33.47
Zm00001d029336_P002	Maize	cytosol	20.93	32.17
Zm00001d047183_P002	Maize	golgi	17.23	29.17

Protein Annotations

EntrezGene:103650637	Gene3D:3.40.50.150	MapMan:35.1	UniProt:A0A1D6MYP6	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	ProteinID:ONM33813.1	ProteinID:ONM33816.1	ProteinID:ONM33823.1
ProteinID:ONM33827.1	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF1062	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI0008452CD0	EnsemblPlantsGene:Zm00001d041844	EnsemblPlants:Zm00001d041844_P021	EnsemblPlants:Zm00001d041844_T021
SEG:seg	:	:	:	:	:

Description

Probable methyltransferase PMT25

Coordinates

chr3:+:140389101..140393504

Molecular Weight (calculated)

113571.0 Da

IEP (calculated)

4.669

GRAVY (calculated)

-0.713

Length

1056 amino acids

Sequence
(BLAST)

0001: MPLFERDRYQ RLDGVGARRP PPPPSSFCSS ATVVVFVALC LVAAWMMASS NNIAVTVTPE NNSGAKDQDG SVDVGGDTRQ ASDEVADTGS GTQSTEVSGD
0101: AGKKDDRSGG DASQTKEDAD GDTDNKDGGD ASQTKEGADG DTGNNKDDGA GATQTAEPVT TVGNDVNQSD VTGRTDATAN GTTRGTDAED SGEPDSGTVA
0201: EGDTPARNQT FSDENGKTEG GEVAKPEDPD KKVEQSAEQT AIDGNTTTSG QDQDENNTDK NTNETGGQAD KREEEASTDD KSTGGQADNT TVQEASTTDD
0301: NSTGGQANNS TKETPTESKE TVGGDDGTAQ SQTSFDDMNG STNDSQPMKE DGKVAENSSD ETASGGKVES TDDDATTGAA SNNATSGGQN VAAETMAFAA
0401: ADDGANGNIT ENSYATNSSA TTEGKIPTVG EGDAAEKADL LPSGQAELLN ETASAVAENG AFPTQAAESS EEKEALAGKN KKKNQKKKKQ KSKDQGAASG
0501: ETAEGKETYA HTWKLCNAST GADYIPCLDN EAAIKKLKST KHYEHRERHC PADAPACLVP LPEGYRQPIP WPYSRDKIWY HNVPHTMLAS FKGHQNWVKV
0601: SGEHLTFPGG GTQFKHGALH YIEVIEEALP EVAWGRRSRV VLDVGCGVAS FGGFLFDKDA LTMSFAPKDE HEAQVQFALE RGIPAVSAVM GTKRLPFPGN
0701: AFDVVHCARC RVPWHIEGGT LLLEVNRLLR PGGLFVWSAT PVYQKVPEDV EIWHAMAALT KSMCWEIVKK TSDTVDETAM VVFKKPTSNE CYDARTRAEP
0801: PLCGASDDQD AAWNVTLRPC MHRVPTDASA RGSRWPTQWP QRLATTPYWL SADQTGVYGK PAPADFAADQ EHWRKVVDNS YRDGMGIDWK NVRNVMDMRA
0901: VYGGSMGHSH RHRSSSSIVR FAAALSDMKV WVMNVVTVDS PDTLPVIYER GLFGMYHDWC ESFSTYPRSY DLVHANHLFS KLKSRCKLLP VIAEVDRVLR
1001: PEGKLIVRDD MATVKEVQSI ARSLHWEVRM TVSKQGQGLL CVRKTMWRPT QVEALS

Best Arabidopsis Sequence Match ( AT1G29470.1 )
(BLAST)

001: MAMGKYSRVD GKKSSGYGLT ITIVLIVSLC LVGAWMFMSS WSAPTESIDF SANERTKDVD TTKSDFKSEE VDRGSKSFPD EKNEETEVVT ETNEEKTDPE
101: KSGEENSGEK TESAEERKEF DDKNGDGDRK NGDGEKDTES ESDETKQKEK TQLEESSEEN KSEDSNGTEE NAGESEENTE KKSEENAGET EESTEKSKDV
201: FPAGDQAEIT KESSTGSGAW STQLVESQNE KKAQVSSIKW KVCNVTAGPD YIPCLDNWQA IRKLHSTKHY EHRERHCPEE SPRCLVSLPE GYKRSIKWPK
301: SREKIWYTNI PHTKLAEVKG HQNWVKMSGE YLTFPGGGTQ FKNGALHYID FLQESYPDIA WGNRTRVILD VGCGVASFGG YLFDRDVLAL SFAPKDEHEA
401: QVQFALERGI PAMSNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKTEEDVGIW KAMSKLTKAM CWELMTIKKD
501: ELNEVGAAIY QKPMSNKCYN ERSQNEPPLC KDSDDQNAAW NVPLEACIHK VTEDSSKRGA VWPESWPERV ETVPQWLDSQ EGVYGKPAQE DFTADHERWK
601: TIVSKSYLNG MGIDWSYVRN VMDMRAVYGG FAAALKDLKL WVMNVVPIDS PDTLPIIYER GLFGIYHDWC ESFSTYPRTY DLLHADHLFS SLKKRCNLVG
701: VMAEVDRILR PQGTFIVRDD METIGEIEKM VKSMKWNVRM THSKDGEGLL SVQKSWWRPT EAETIQSAIA

Arabidopsis Description

Probable methyltransferase PMT24 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.