Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43336 | Canola | cytosol | 23.38 | 93.75 |
| CDX94669 | Canola | endoplasmic reticulum | 90.0 | 92.52 |
| CDY44314 | Canola | endoplasmic reticulum | 88.83 | 91.94 |
| Bra030140.1-P | Field mustard | endoplasmic reticulum, golgi, mitochondrion, plastid | 89.35 | 91.73 |
| CDX90190 | Canola | golgi, mitochondrion, plasma membrane, plastid, vacuole | 81.69 | 91.56 |
| Bra010830.1-P | Field mustard | golgi | 81.04 | 91.5 |
| CDX99828 | Canola | golgi | 88.96 | 91.33 |
| CDY48339 | Canola | cytosol | 88.83 | 90.48 |
| Bra032319.1-P | Field mustard | cytosol | 88.44 | 90.44 |
| CDY66721 | Canola | golgi | 62.08 | 90.36 |
| AT2G34300.3 | Thale cress | endoplasmic reticulum, golgi, vacuole | 83.38 | 83.38 |
| Os12t0178300-00 | Rice | cytosol | 22.21 | 64.53 |
| GSMUA_Achr8P32550_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 55.84 | 64.28 |
| GSMUA_Achr7P23260_001 | Banana | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 59.35 | 62.6 |
| Zm00001d002943_P002 | Maize | plasma membrane | 52.6 | 60.36 |
| Os04t0692400-01 | Rice | mitochondrion, peroxisome | 52.34 | 59.53 |
| EES11713 | Sorghum | plastid | 54.16 | 59.07 |
| EES03991 | Sorghum | plastid | 60.52 | 58.91 |
| Zm00001d012211_P008 | Maize | plastid | 60.39 | 58.71 |
| TraesCS2D01G569900.1 | Wheat | plastid | 53.51 | 58.61 |
| Solyc04g063230.2.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 58.31 | 58.46 |
| TraesCSU01G022400.1 | Wheat | plastid | 53.38 | 58.3 |
| TraesCS3B01G439800.3 | Wheat | cytosol, golgi, mitochondrion, plastid, vacuole | 60.52 | 58.03 |
| TraesCS3D01G401300.2 | Wheat | golgi | 60.26 | 57.78 |
| HORVU3Hr1G090970.1 | Barley | cytosol, golgi, mitochondrion, plastid, vacuole | 60.52 | 57.67 |
| AT5G64030.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 62.08 | 57.66 |
| TraesCS3A01G406100.1 | Wheat | plastid | 60.39 | 57.55 |
| Os01t0883900-02 | Rice | golgi, mitochondrion, plasma membrane, vacuole | 59.61 | 56.95 |
| GSMUA_Achr8P30140_001 | Banana | nucleus | 57.92 | 56.6 |
| PGSC0003DMT400006139 | Potato | nucleus | 58.57 | 56.59 |
| VIT_18s0001g01270.t01 | Wine grape | plasma membrane | 63.77 | 55.92 |
| TraesCS2A01G560300.1 | Wheat | mitochondrion, peroxisome, plastid | 52.73 | 54.86 |
| KRH64591 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 58.18 | 53.72 |
| KRH53330 | Soybean | endoplasmic reticulum | 57.79 | 53.29 |
| HORVU2Hr1G127220.1 | Barley | cytosol | 53.51 | 53.02 |
| GSMUA_Achr11P... | Banana | mitochondrion | 56.88 | 52.58 |
| GSMUA_Achr8P08230_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 57.01 | 50.06 |
| AT2G40280.1 | Thale cress | extracellular, plasma membrane | 38.18 | 49.92 |
| Os11t0186300-01 | Rice | plasma membrane | 54.55 | 48.44 |
| AT3G51070.1 | Thale cress | extracellular, mitochondrion, plasma membrane, plastid, vacuole | 55.97 | 48.16 |
| HORVU4Hr1G017470.1 | Barley | vacuole | 54.42 | 46.97 |
| TraesCS4D01G094600.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole | 54.29 | 46.81 |
| TraesCS4B01G098500.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 54.29 | 46.65 |
| EES08114 | Sorghum | golgi, mitochondrion, plastid, vacuole | 54.16 | 46.64 |
| TraesCS4A01G220000.1 | Wheat | golgi | 54.03 | 46.53 |
| Zm00001d004720_P001 | Maize | golgi | 54.55 | 46.36 |
| AT3G56080.1 | Thale cress | endoplasmic reticulum, vacuole | 36.49 | 46.07 |
| HORVU5Hr1G037320.6 | Barley | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 52.47 | 43.35 |
| AT4G14360.2 | Thale cress | endoplasmic reticulum, golgi | 32.08 | 40.62 |
| TraesCS5D01G127100.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 53.12 | 40.22 |
| TraesCS5B01G120300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 53.12 | 40.14 |
| AT3G23300.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 31.56 | 39.77 |
| Zm00001d041844_P021 | Maize | golgi, mitochondrion, nucleus, plasma membrane, plastid | 54.29 | 39.58 |
| TraesCS5A01G114100.1 | Wheat | endoplasmic reticulum | 52.99 | 39.27 |
| KXG23110 | Sorghum | endoplasmic reticulum | 55.06 | 38.97 |
| AT1G04430.1 | Thale cress | endoplasmic reticulum, golgi | 31.3 | 38.68 |
| AT5G04060.1 | Thale cress | plasma membrane, plastid | 30.0 | 38.5 |
| AT1G19430.1 | Thale cress | mitochondrion | 35.97 | 38.26 |
| AT1G77260.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 32.34 | 38.02 |
| AT5G14430.1 | Thale cress | endoplasmic reticulum | 30.0 | 37.75 |
| AT5G06050.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 33.25 | 37.54 |
| AT4G19120.2 | Thale cress | cytosol, endoplasmic reticulum, golgi | 29.22 | 37.5 |
| AT1G26850.2 | Thale cress | endoplasmic reticulum, golgi | 29.87 | 37.34 |
| AT4G00740.1 | Thale cress | golgi | 29.09 | 37.33 |
| AT4G10440.1 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 30.65 | 37.28 |
| AT1G31850.3 | Thale cress | cytosol, endoplasmic reticulum, golgi | 28.7 | 36.65 |
| AT2G39750.1 | Thale cress | endoplasmic reticulum, golgi | 32.86 | 36.46 |
| AT3G10200.2 | Thale cress | extracellular, plasma membrane, vacuole | 28.31 | 36.39 |
| AT1G33170.1 | Thale cress | cytosol | 29.87 | 35.99 |
| AT4G18030.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 28.7 | 35.59 |
| AT2G43200.2 | Thale cress | endoplasmic reticulum, golgi | 27.14 | 34.21 |
| AT4G00750.1 | Thale cress | mitochondrion | 27.66 | 33.65 |
| AT2G45750.1 | Thale cress | endoplasmic reticulum, golgi | 27.4 | 33.44 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.1 | EntrezGene:839823 | UniProt:A0A178W7M1 | ProteinID:AAG51752.1 | ProteinID:AEE31093.1 |
| ProteinID:AEE31094.1 | EMBL:AK227015 | ArrayExpress:AT1G29470 | EnsemblPlantsGene:AT1G29470 | RefSeq:AT1G29470 | TAIR:AT1G29470 |
| RefSeq:AT1G29470-TAIR-G | EnsemblPlants:AT1G29470.1 | TAIR:AT1G29470.1 | Unigene:At.43464 | EMBL:BT010751 | ncoils:Coil |
| GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0008757 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0032259 |
| RefSeq:NP_001031109.1 | RefSeq:NP_174240.2 | ProteinID:OAP14074.1 | PFAM:PF03141 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR10108 | PANTHER:PTHR10108:SF1056 | InterPro:Put_SAM_MeTrfase | UniProt:Q6NPR7 | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF53335 | TMHMM:TMhelix | UniParc:UPI0000196F1F | SEG:seg | : | : |
Description
Probable methyltransferase PMT24 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR7]
Coordinates
chr1:-:10310131..10314147
Molecular Weight (calculated)
87208.9 Da
IEP (calculated)
4.881
GRAVY (calculated)
-0.736
Length
770 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMGKYSRVD GKKSSGYGLT ITIVLIVSLC LVGAWMFMSS WSAPTESIDF SANERTKDVD TTKSDFKSEE VDRGSKSFPD EKNEETEVVT ETNEEKTDPE
101: KSGEENSGEK TESAEERKEF DDKNGDGDRK NGDGEKDTES ESDETKQKEK TQLEESSEEN KSEDSNGTEE NAGESEENTE KKSEENAGET EESTEKSKDV
201: FPAGDQAEIT KESSTGSGAW STQLVESQNE KKAQVSSIKW KVCNVTAGPD YIPCLDNWQA IRKLHSTKHY EHRERHCPEE SPRCLVSLPE GYKRSIKWPK
301: SREKIWYTNI PHTKLAEVKG HQNWVKMSGE YLTFPGGGTQ FKNGALHYID FLQESYPDIA WGNRTRVILD VGCGVASFGG YLFDRDVLAL SFAPKDEHEA
401: QVQFALERGI PAMSNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKTEEDVGIW KAMSKLTKAM CWELMTIKKD
501: ELNEVGAAIY QKPMSNKCYN ERSQNEPPLC KDSDDQNAAW NVPLEACIHK VTEDSSKRGA VWPESWPERV ETVPQWLDSQ EGVYGKPAQE DFTADHERWK
601: TIVSKSYLNG MGIDWSYVRN VMDMRAVYGG FAAALKDLKL WVMNVVPIDS PDTLPIIYER GLFGIYHDWC ESFSTYPRTY DLLHADHLFS SLKKRCNLVG
701: VMAEVDRILR PQGTFIVRDD METIGEIEKM VKSMKWNVRM THSKDGEGLL SVQKSWWRPT EAETIQSAIA
101: KSGEENSGEK TESAEERKEF DDKNGDGDRK NGDGEKDTES ESDETKQKEK TQLEESSEEN KSEDSNGTEE NAGESEENTE KKSEENAGET EESTEKSKDV
201: FPAGDQAEIT KESSTGSGAW STQLVESQNE KKAQVSSIKW KVCNVTAGPD YIPCLDNWQA IRKLHSTKHY EHRERHCPEE SPRCLVSLPE GYKRSIKWPK
301: SREKIWYTNI PHTKLAEVKG HQNWVKMSGE YLTFPGGGTQ FKNGALHYID FLQESYPDIA WGNRTRVILD VGCGVASFGG YLFDRDVLAL SFAPKDEHEA
401: QVQFALERGI PAMSNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKTEEDVGIW KAMSKLTKAM CWELMTIKKD
501: ELNEVGAAIY QKPMSNKCYN ERSQNEPPLC KDSDDQNAAW NVPLEACIHK VTEDSSKRGA VWPESWPERV ETVPQWLDSQ EGVYGKPAQE DFTADHERWK
601: TIVSKSYLNG MGIDWSYVRN VMDMRAVYGG FAAALKDLKL WVMNVVPIDS PDTLPIIYER GLFGIYHDWC ESFSTYPRTY DLLHADHLFS SLKKRCNLVG
701: VMAEVDRILR PQGTFIVRDD METIGEIEKM VKSMKWNVRM THSKDGEGLL SVQKSWWRPT EAETIQSAIA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.