Factsheet for TraesCSU01G022400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 3
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G569900.1	Wheat	plastid	96.17	96.44
TraesCS2A01G560300.1	Wheat	mitochondrion, peroxisome, plastid	94.61	90.14
HORVU2Hr1G127220.1	Barley	cytosol	91.06	82.63
Zm00001d002943_P002	Maize	plasma membrane	72.91	76.6
EES11713	Sorghum	plastid	74.89	74.79
Os04t0692400-01	Rice	mitochondrion, peroxisome	70.92	73.86
CDY43336	Canola	cytosol	17.87	65.62
Bra010830.1-P	Field mustard	golgi	56.74	58.65
CDX90190	Canola	golgi, mitochondrion, plasma membrane, plastid, vacuole	56.88	58.37
CDY31339	Canola	plasma membrane	61.84	57.07
CDY39830	Canola	plasma membrane	61.7	56.35
CDX84330	Canola	endoplasmic reticulum, plasma membrane	56.31	55.68
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	59.57	54.69
CDY44314	Canola	endoplasmic reticulum	57.3	54.3
CDX99828	Canola	golgi	57.45	54.0
KRH53915	Soybean	endoplasmic reticulum	61.7	53.97
CDY48339	Canola	cytosol	57.87	53.97
Bra030140.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	57.3	53.87
CDX94669	Canola	endoplasmic reticulum	57.16	53.81
Bra032319.1-P	Field mustard	cytosol	57.3	53.65
AT1G29470.1	Thale cress	golgi	58.3	53.38
PGSC0003DMT400059933	Potato	golgi	61.42	53.26
KRH64022	Soybean	endoplasmic reticulum	61.13	53.21
CDY43782	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	60.14	53.07
Solyc05g056580.2.1	Tomato	golgi	61.13	53.01
PGSC0003DMT400006139	Potato	nucleus	59.86	52.95
CDY17234	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	56.74	52.49
AT5G64030.1	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	61.7	52.47
Bra005438.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	56.6	52.36
VIT_04s0044g01670.t01	Wine grape	cytosol	61.13	52.24
CDY66721	Canola	golgi	39.15	52.17
AT2G34300.3	Thale cress	endoplasmic reticulum, golgi, vacuole	56.45	51.69
CDX84478	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	60.85	51.07
KRH59591	Soybean	golgi, mitochondrion, plasma membrane, plastid, vacuole	60.14	51.02
KRH40943	Soybean	golgi	59.72	50.0
KRH64591	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	58.58	49.52
KRH53330	Soybean	endoplasmic reticulum	58.01	48.98
VIT_18s0001g01270.t01	Wine grape	plasma membrane	60.99	48.97
Bra024260.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	59.01	44.54

Protein Annotations

EnsemblPlants:TraesCSU01G022400.1	EnsemblPlantsGene:TraesCSU01G022400	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	PANTHER:PTHR10108
PANTHER:PTHR10108:SF1055	PFAM:PF03141	PFscan:PS51257	SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:23998547..24001569

Molecular Weight (calculated)

79253.9 Da

IEP (calculated)

6.591

GRAVY (calculated)

-0.459

Length

705 amino acids

Sequence
(BLAST)

001: MALGHTRLDV RRQHQQHAAS SSCCSAPAVA AFVGLCLVAV WTASSALVTP ADFSPFQAPL WRRAAAPAEG NAPPAVVSDE EAADNQEPPA ADRQQAGSTE
101: KAKGADEQQS AAEKPEEKPD EKPKAKKVEA EVFPDAKDAE LLNQTAMEPG PWRTQAAESN TETNERTNAS SSVQAASHSW KLCDVDAGAD YIPCLDNVEA
201: IRKLRSDKHY EHRERHCPEE APTCLVPLPP GYRSPIRWPE SRDQIWYSNV PHTKLVEYKG HQNWVNVSGE HLVFPGGGTQ FKRGALHYID FIQEAKKDVA
301: WGKRTRVVLD VGCGVASFGG YLFDRDVLTM SFAPKDEHEA QVQFALERGI PAISAVMGTK RLPFPGGVFD AVHCARCRVP WHIEGGKLLL ELNRLLRPGG
401: YFVWSATPVY QKLPEDVEIW EAMSALTRSM CWNVVNKVKD RINRVGVAIF QKPMDNRCYD GRSAANPPLC GEFDNPDAAW NVSLQSCMHK LPRDPTMRGL
501: RWPEEWPLRV EKPPYWLKSS ETGVYGKPAP EDFQADYEHW KRVISNSYME GLGIDWSAVR NVMDMKAVYG GFAAALRNMK VWVMNVVPID SPDTLPIIYE
601: RGLFGLYHDW CESFSTYPRS YDLVHANHLF SKIKKRCELL GVIVEVDRIV RPEGRLIVRD DMETIREVES IVKSLHWEVR LSYSQDNEGL LFVQKTMWRP
701: NTSSS

Best Arabidopsis Sequence Match ( AT1G29470.1 )
(BLAST)

001: MAMGKYSRVD GKKSSGYGLT ITIVLIVSLC LVGAWMFMSS WSAPTESIDF SANERTKDVD TTKSDFKSEE VDRGSKSFPD EKNEETEVVT ETNEEKTDPE
101: KSGEENSGEK TESAEERKEF DDKNGDGDRK NGDGEKDTES ESDETKQKEK TQLEESSEEN KSEDSNGTEE NAGESEENTE KKSEENAGET EESTEKSKDV
201: FPAGDQAEIT KESSTGSGAW STQLVESQNE KKAQVSSIKW KVCNVTAGPD YIPCLDNWQA IRKLHSTKHY EHRERHCPEE SPRCLVSLPE GYKRSIKWPK
301: SREKIWYTNI PHTKLAEVKG HQNWVKMSGE YLTFPGGGTQ FKNGALHYID FLQESYPDIA WGNRTRVILD VGCGVASFGG YLFDRDVLAL SFAPKDEHEA
401: QVQFALERGI PAMSNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKTEEDVGIW KAMSKLTKAM CWELMTIKKD
501: ELNEVGAAIY QKPMSNKCYN ERSQNEPPLC KDSDDQNAAW NVPLEACIHK VTEDSSKRGA VWPESWPERV ETVPQWLDSQ EGVYGKPAQE DFTADHERWK
601: TIVSKSYLNG MGIDWSYVRN VMDMRAVYGG FAAALKDLKL WVMNVVPIDS PDTLPIIYER GLFGIYHDWC ESFSTYPRTY DLLHADHLFS SLKKRCNLVG
701: VMAEVDRILR PQGTFIVRDD METIGEIEKM VKSMKWNVRM THSKDGEGLL SVQKSWWRPT EAETIQSAIA

Arabidopsis Description

Probable methyltransferase PMT24 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.