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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 2
  • plastid 1
  • mitochondrion 2
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:nucleus
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
endoplasmic reticulum: 23041469
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
msms PMID: 23041469 doi
S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH53915 Soybean endoplasmic reticulum 93.83 94.29
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 76.67 74.73
KRH40943 Soybean golgi 76.05 73.16
Os12t0178300-00 Rice cytosol 22.35 68.3
CDY39830 Canola plasma membrane 64.69 67.88
GSMUA_Achr8P32550_001 Banana cytosol, endoplasmic reticulum, golgi, mitochondrion 56.05 67.86
CDY31339 Canola plasma membrane 63.95 67.8
Solyc05g056580.2.1 Tomato golgi 67.41 67.16
PGSC0003DMT400059933 Potato golgi 67.28 67.04
VIT_04s0044g01670.t01 Wine grape cytosol 68.15 66.91
GSMUA_Achr7P23260_001 Banana cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 59.38 65.89
Zm00001d002943_P002 Maize plasma membrane 53.33 64.38
AT5G64030.1 Thale cress endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 65.43 63.93
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 62.35 63.2
Os04t0692400-01 Rice mitochondrion, peroxisome 52.72 63.07
EES03991 Sorghum plastid 61.36 62.83
Zm00001d012211_P008 Maize plastid 61.36 62.75
EES11713 Sorghum plastid 54.57 62.61
GSMUA_Achr8P30140_001 Banana nucleus 60.49 62.18
TraesCS2D01G569900.1 Wheat plastid 53.21 61.31
TraesCS3B01G439800.3 Wheat cytosol, golgi, mitochondrion, plastid, vacuole 60.74 61.27
TraesCS3D01G401300.2 Wheat golgi 60.62 61.15
TraesCSU01G022400.1 Wheat plastid 53.21 61.13
HORVU3Hr1G090970.1 Barley cytosol, golgi, mitochondrion, plastid, vacuole 60.62 60.77
TraesCS3A01G406100.1 Wheat plastid 60.62 60.77
Os01t0883900-02 Rice golgi, mitochondrion, plasma membrane, vacuole 60.37 60.67
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 62.72 60.48
KRH28732 Soybean endoplasmic reticulum 55.43 58.46
TraesCS2A01G560300.1 Wheat mitochondrion, peroxisome, plastid 52.96 57.97
GSMUA_Achr11P... Banana mitochondrion 59.51 57.86
KRH53330 Soybean endoplasmic reticulum 59.01 57.25
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 58.89 57.19
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 55.68 56.66
HORVU2Hr1G127220.1 Barley cytosol 53.33 55.6
Bra024260.1-P Field mustard extracellular, mitochondrion, plasma membrane, vacuole 62.47 54.18
GSMUA_Achr8P08230_001 Banana cytosol, endoplasmic reticulum, golgi, mitochondrion 57.41 53.02
Os11t0186300-01 Rice plasma membrane 55.56 51.9
KRH69842 Soybean mitochondrion 51.98 50.97
KRH73268 Soybean endoplasmic reticulum 37.28 50.76
KRG97692 Soybean plastid 24.07 50.52
KRH31179 Soybean plasma membrane 37.04 50.51
KRH14916 Soybean nucleus 36.79 50.08
HORVU4Hr1G017470.1 Barley vacuole 54.94 49.89
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 54.94 49.78
TraesCS4D01G094600.1 Wheat endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole 54.69 49.61
Zm00001d004720_P001 Maize golgi 55.19 49.34
TraesCS4B01G098500.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole 54.44 49.22
TraesCS4A01G220000.1 Wheat golgi 54.32 49.22
HORVU5Hr1G037320.6 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid 52.84 45.92
Zm00001d041844_P021 Maize golgi, mitochondrion, nucleus, plasma membrane, plastid 55.43 42.52
TraesCS5D01G127100.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 53.09 42.28
KRH05816 Soybean endoplasmic reticulum 36.42 42.2
TraesCS5B01G120300.1 Wheat endoplasmic reticulum, golgi, mitochondrion, plasma membrane 52.84 42.0
TraesCS5A01G114100.1 Wheat endoplasmic reticulum 53.33 41.58
KRH15210 Soybean mitochondrion 36.42 41.49
KXG23110 Sorghum endoplasmic reticulum 55.19 41.08
KRH32196 Soybean golgi 29.75 40.71
KRG95687 Soybean cytosol, golgi, plasma membrane, plastid 31.36 40.71
KRH19571 Soybean golgi 29.63 40.47
KRH34393 Soybean endoplasmic reticulum 30.86 40.26
KRH00647 Soybean cytosol 26.67 40.07
KRH31698 Soybean endoplasmic reticulum 30.62 39.68
KRG92410 Soybean endoplasmic reticulum, golgi 30.37 39.68
KRG97843 Soybean endoplasmic reticulum 32.47 39.67
KRH31030 Soybean endoplasmic reticulum, plasma membrane 32.72 39.55
KRH69085 Soybean endoplasmic reticulum, golgi 30.49 39.52
KRH15065 Soybean nucleus 31.98 39.01
KRH67404 Soybean endoplasmic reticulum, golgi, plasma membrane 30.49 38.84
KRH73069 Soybean endoplasmic reticulum 31.36 38.6
KRH16455 Soybean endoplasmic reticulum, golgi 31.36 38.48
KRH18054 Soybean endoplasmic reticulum, golgi 31.48 38.46
KRH48238 Soybean endoplasmic reticulum 28.15 38.38
KRH76381 Soybean cytosol, golgi, plasma membrane 28.15 38.19
KRH65147 Soybean endoplasmic reticulum 28.15 38.19
KRH39668 Soybean endoplasmic reticulum 28.02 38.02
KRG99086 Soybean endoplasmic reticulum 28.52 37.99
KRH40535 Soybean plastid 27.9 37.86
KRH57576 Soybean endoplasmic reticulum 28.64 37.85
KRH45909 Soybean endoplasmic reticulum 28.4 37.83
KRH04297 Soybean endoplasmic reticulum 28.52 37.68
KRH00643 Soybean endoplasmic reticulum, mitochondrion 27.65 37.58
KRH63351 Soybean endoplasmic reticulum 28.02 37.46
KRH07708 Soybean cytosol 27.65 37.46
KRH74853 Soybean endoplasmic reticulum, golgi 28.02 37.4
KRH70718 Soybean endoplasmic reticulum 28.02 37.4
KRH07206 Soybean cytosol, golgi, plasma membrane 27.53 37.29
KRH01812 Soybean extracellular, plasma membrane, vacuole 26.3 37.04
KRG91450 Soybean mitochondrion 27.28 36.83
KRH07208 Soybean cytosol 27.41 36.76
KRH72067 Soybean plastid 27.16 36.48
KRH54546 Soybean golgi 25.8 36.16
KRH41379 Soybean cytosol 28.02 36.09
KRH60099 Soybean cytosol 27.65 35.96
KRH33118 Soybean extracellular, golgi, plastid 26.79 35.81
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 27.41 35.69
KRH09116 Soybean endoplasmic reticulum 27.78 35.6
KRH38569 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 27.28 34.91
KRH48242 Soybean endoplasmic reticulum 27.04 34.17
KRH46879 Soybean endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 26.3 33.81
Protein Annotations
EntrezGene:100777586Gene3D:3.40.50.150MapMan:35.1EMBL:ACUP02002737EnsemblPlantsGene:GLYMA_04G211300GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259UniProt:I1JY06EnsemblPlants:KRH64022ProteinID:KRH64022ProteinID:KRH64022.1PFAM:PF03141
PANTHER:PTHR10108PANTHER:PTHR10108:SF1060InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelix
UniParc:UPI00023397FCSEG:seg::::
Description
hypothetical protein
Coordinates
chr4:-:48320108..48325935
Molecular Weight (calculated)
91806.1 Da
IEP (calculated)
4.959
GRAVY (calculated)
-0.760
Length
810 amino acids
Sequence
(BLAST)
001: MALGKYARVD GRRSSSWCST VTVVMFVALC LVGVWMMTSS SVVPVRNGDE AQENKNQVKE QAEVKEAVSE VSNSNTRQFE DNPGDLPEDA TKGDSNVTFE
101: DNSNSSDKQE KLEENPVERS SDDTKTEDVD DKKTEEEGSN TENESNSDSV ENNKDSDETS TKESDSDESE KKPDSDDNKK SDSDESEKQS DDSDETTNTR
201: IEEKVEESDN KESDENFIEK NTNDDTKQKT SKEVYPSGAQ SELHEESTTE TGSWSTQAAE SKNEKESQES SKQATGYKWK LCNVTAGPDF IPCLDNWKAI
301: RSLRSTKHYE HRERHCPEEP PTCLVPVPEG YKRPIEWPKS REKIWYYNVP HTKLAKVKGH QNWVKVTGEY LTFPGGGTQF KHGALHYIDF IQETEPDIAW
401: GKRTRVILDV GCGVASFGGF LFDRDVLAMS LAPKDEHEAQ VQFALERGIP AISAVMGTKR LPFPGKVFDV VHCARCRVPW HIEGGKLLLE LNRVLRPGGF
501: FVWSATPIYQ KLPEDVEIWK AMKTLTKAMC WEVVSISKDQ VNGVGVAVYK KPTSNECYEQ RSKNEPPLCP DSDDPNAAWN IKLQACMHKV PASSKERGSK
601: LPELWPARLT KVPYWLLSSQ VGVYGKPAPE DFTADYEHWK RVVSQSYLDG MGIKWSNVRN VMDMRSIYGG FAAALRDLNV WVMNVVTIDS PDTLPIIFER
701: GLFGIYHDWC ESFSTYPRTY DLLHADHLFS KLKKRCNLAA VVAEADRILR PEGKLIVRDT VEIVEELESM ARSMQWKVRM TYSKDKEGLL CVEKSKWRPK
801: EQEKLEYAIV
Best Arabidopsis Sequence Match ( AT1G29470.2 )
(BLAST)
001: MAMGKYSRVD GKKSSGYGLT ITIVLIVSLC LVGAWMFMSS WSAPTESIDF SANERTKDVD TTKSDFKSEE VDRGSKSFPD EKNEETEVVT ETNEEKTDPE
101: KSGEENSGEK TESAEERKEF DDKNGDGDRK NGDGEKDTES ESDETKQKEK TQLEESSEEN KSEDSNGTEE NAGESEENTE KKSEENAGET EESTEKSKDV
201: FPAGDQAEIT KESSTGSGAW STQLVESQNE KKAQVSSIKW KVCNVTAGPD YIPCLDNWQA IRKLHSTKHY EHRERHCPEE SPRCLVSLPE GYKRSIKWPK
301: SREKIWYTNI PHTKLAEVKG HQNWVKMSGE YLTFPGGGTQ FKNGALHYID FLQESYPDIA WGNRTRVILD VGCGVASFGG YLFDRDVLAL SFAPKDEHEA
401: QVQFALERGI PAMSNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKTEEDVGIW KAMSKLTKAM CWELMTIKKD
501: ELNEVGAAIY QKPMSNKCYN ERSQNEPPLC KDSDDQNAAW NVPLEACIHK VTEDSSKRGA VWPESWPERV ETVPQWLDSQ EGVYGKPAQE DFTADHERWK
601: TIVSKSYLNG MGIDWSYVRN VMDMRAVYGG FAAALKDLKL WVMNVVPIDS PDTLPIIYER GLFGIYHDWC ESFSTYPRTY DLLHADHLFS SLKKRCNLVG
701: VMAEVDRILR PQGTFIVRDD METIGEIEKM VKSMKWNVRM THSKDGEGLL SVQKSWWRPT EAETIQSAIA
Arabidopsis Description
Probable methyltransferase PMT24 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.