Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- mitochondrion 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
endoplasmic reticulum:
23041469
endoplasmic reticulum: 27224218 endoplasmic reticulum: 28499913 |
msms PMID:
23041469
doi
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH53915 | Soybean | endoplasmic reticulum | 93.83 | 94.29 |
KRH59591 | Soybean | golgi, mitochondrion, plasma membrane, plastid, vacuole | 76.67 | 74.73 |
KRH40943 | Soybean | golgi | 76.05 | 73.16 |
Os12t0178300-00 | Rice | cytosol | 22.35 | 68.3 |
CDY39830 | Canola | plasma membrane | 64.69 | 67.88 |
GSMUA_Achr8P32550_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 56.05 | 67.86 |
CDY31339 | Canola | plasma membrane | 63.95 | 67.8 |
Solyc05g056580.2.1 | Tomato | golgi | 67.41 | 67.16 |
PGSC0003DMT400059933 | Potato | golgi | 67.28 | 67.04 |
VIT_04s0044g01670.t01 | Wine grape | cytosol | 68.15 | 66.91 |
GSMUA_Achr7P23260_001 | Banana | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 59.38 | 65.89 |
Zm00001d002943_P002 | Maize | plasma membrane | 53.33 | 64.38 |
AT5G64030.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 65.43 | 63.93 |
CDY43782 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 62.35 | 63.2 |
Os04t0692400-01 | Rice | mitochondrion, peroxisome | 52.72 | 63.07 |
EES03991 | Sorghum | plastid | 61.36 | 62.83 |
Zm00001d012211_P008 | Maize | plastid | 61.36 | 62.75 |
EES11713 | Sorghum | plastid | 54.57 | 62.61 |
GSMUA_Achr8P30140_001 | Banana | nucleus | 60.49 | 62.18 |
TraesCS2D01G569900.1 | Wheat | plastid | 53.21 | 61.31 |
TraesCS3B01G439800.3 | Wheat | cytosol, golgi, mitochondrion, plastid, vacuole | 60.74 | 61.27 |
TraesCS3D01G401300.2 | Wheat | golgi | 60.62 | 61.15 |
TraesCSU01G022400.1 | Wheat | plastid | 53.21 | 61.13 |
HORVU3Hr1G090970.1 | Barley | cytosol, golgi, mitochondrion, plastid, vacuole | 60.62 | 60.77 |
TraesCS3A01G406100.1 | Wheat | plastid | 60.62 | 60.77 |
Os01t0883900-02 | Rice | golgi, mitochondrion, plasma membrane, vacuole | 60.37 | 60.67 |
CDX84478 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 62.72 | 60.48 |
KRH28732 | Soybean | endoplasmic reticulum | 55.43 | 58.46 |
TraesCS2A01G560300.1 | Wheat | mitochondrion, peroxisome, plastid | 52.96 | 57.97 |
GSMUA_Achr11P... | Banana | mitochondrion | 59.51 | 57.86 |
KRH53330 | Soybean | endoplasmic reticulum | 59.01 | 57.25 |
KRH64591 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 58.89 | 57.19 |
KRH76730 | Soybean | endoplasmic reticulum, golgi, plastid | 55.68 | 56.66 |
HORVU2Hr1G127220.1 | Barley | cytosol | 53.33 | 55.6 |
Bra024260.1-P | Field mustard | extracellular, mitochondrion, plasma membrane, vacuole | 62.47 | 54.18 |
GSMUA_Achr8P08230_001 | Banana | cytosol, endoplasmic reticulum, golgi, mitochondrion | 57.41 | 53.02 |
Os11t0186300-01 | Rice | plasma membrane | 55.56 | 51.9 |
KRH69842 | Soybean | mitochondrion | 51.98 | 50.97 |
KRH73268 | Soybean | endoplasmic reticulum | 37.28 | 50.76 |
KRG97692 | Soybean | plastid | 24.07 | 50.52 |
KRH31179 | Soybean | plasma membrane | 37.04 | 50.51 |
KRH14916 | Soybean | nucleus | 36.79 | 50.08 |
HORVU4Hr1G017470.1 | Barley | vacuole | 54.94 | 49.89 |
EES08114 | Sorghum | golgi, mitochondrion, plastid, vacuole | 54.94 | 49.78 |
TraesCS4D01G094600.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole | 54.69 | 49.61 |
Zm00001d004720_P001 | Maize | golgi | 55.19 | 49.34 |
TraesCS4B01G098500.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole | 54.44 | 49.22 |
TraesCS4A01G220000.1 | Wheat | golgi | 54.32 | 49.22 |
HORVU5Hr1G037320.6 | Barley | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 52.84 | 45.92 |
Zm00001d041844_P021 | Maize | golgi, mitochondrion, nucleus, plasma membrane, plastid | 55.43 | 42.52 |
TraesCS5D01G127100.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 53.09 | 42.28 |
KRH05816 | Soybean | endoplasmic reticulum | 36.42 | 42.2 |
TraesCS5B01G120300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 52.84 | 42.0 |
TraesCS5A01G114100.1 | Wheat | endoplasmic reticulum | 53.33 | 41.58 |
KRH15210 | Soybean | mitochondrion | 36.42 | 41.49 |
KXG23110 | Sorghum | endoplasmic reticulum | 55.19 | 41.08 |
KRH32196 | Soybean | golgi | 29.75 | 40.71 |
KRG95687 | Soybean | cytosol, golgi, plasma membrane, plastid | 31.36 | 40.71 |
KRH19571 | Soybean | golgi | 29.63 | 40.47 |
KRH34393 | Soybean | endoplasmic reticulum | 30.86 | 40.26 |
KRH00647 | Soybean | cytosol | 26.67 | 40.07 |
KRH31698 | Soybean | endoplasmic reticulum | 30.62 | 39.68 |
KRG92410 | Soybean | endoplasmic reticulum, golgi | 30.37 | 39.68 |
KRG97843 | Soybean | endoplasmic reticulum | 32.47 | 39.67 |
KRH31030 | Soybean | endoplasmic reticulum, plasma membrane | 32.72 | 39.55 |
KRH69085 | Soybean | endoplasmic reticulum, golgi | 30.49 | 39.52 |
KRH15065 | Soybean | nucleus | 31.98 | 39.01 |
KRH67404 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 30.49 | 38.84 |
KRH73069 | Soybean | endoplasmic reticulum | 31.36 | 38.6 |
KRH16455 | Soybean | endoplasmic reticulum, golgi | 31.36 | 38.48 |
KRH18054 | Soybean | endoplasmic reticulum, golgi | 31.48 | 38.46 |
KRH48238 | Soybean | endoplasmic reticulum | 28.15 | 38.38 |
KRH76381 | Soybean | cytosol, golgi, plasma membrane | 28.15 | 38.19 |
KRH65147 | Soybean | endoplasmic reticulum | 28.15 | 38.19 |
KRH39668 | Soybean | endoplasmic reticulum | 28.02 | 38.02 |
KRG99086 | Soybean | endoplasmic reticulum | 28.52 | 37.99 |
KRH40535 | Soybean | plastid | 27.9 | 37.86 |
KRH57576 | Soybean | endoplasmic reticulum | 28.64 | 37.85 |
KRH45909 | Soybean | endoplasmic reticulum | 28.4 | 37.83 |
KRH04297 | Soybean | endoplasmic reticulum | 28.52 | 37.68 |
KRH00643 | Soybean | endoplasmic reticulum, mitochondrion | 27.65 | 37.58 |
KRH63351 | Soybean | endoplasmic reticulum | 28.02 | 37.46 |
KRH07708 | Soybean | cytosol | 27.65 | 37.46 |
KRH74853 | Soybean | endoplasmic reticulum, golgi | 28.02 | 37.4 |
KRH70718 | Soybean | endoplasmic reticulum | 28.02 | 37.4 |
KRH07206 | Soybean | cytosol, golgi, plasma membrane | 27.53 | 37.29 |
KRH01812 | Soybean | extracellular, plasma membrane, vacuole | 26.3 | 37.04 |
KRG91450 | Soybean | mitochondrion | 27.28 | 36.83 |
KRH07208 | Soybean | cytosol | 27.41 | 36.76 |
KRH72067 | Soybean | plastid | 27.16 | 36.48 |
KRH54546 | Soybean | golgi | 25.8 | 36.16 |
KRH41379 | Soybean | cytosol | 28.02 | 36.09 |
KRH60099 | Soybean | cytosol | 27.65 | 35.96 |
KRH33118 | Soybean | extracellular, golgi, plastid | 26.79 | 35.81 |
KRH40534 | Soybean | endoplasmic reticulum, mitochondrion, vacuole | 27.41 | 35.69 |
KRH09116 | Soybean | endoplasmic reticulum | 27.78 | 35.6 |
KRH38569 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 27.28 | 34.91 |
KRH48242 | Soybean | endoplasmic reticulum | 27.04 | 34.17 |
KRH46879 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 26.3 | 33.81 |
Protein Annotations
EntrezGene:100777586 | Gene3D:3.40.50.150 | MapMan:35.1 | EMBL:ACUP02002737 | EnsemblPlantsGene:GLYMA_04G211300 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008757 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
GO:GO:0032259 | UniProt:I1JY06 | EnsemblPlants:KRH64022 | ProteinID:KRH64022 | ProteinID:KRH64022.1 | PFAM:PF03141 |
PANTHER:PTHR10108 | PANTHER:PTHR10108:SF1060 | InterPro:Put_SAM_MeTrfase | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | TMHMM:TMhelix |
UniParc:UPI00023397FC | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:48320108..48325935
Molecular Weight (calculated)
91806.1 Da
IEP (calculated)
4.959
GRAVY (calculated)
-0.760
Length
810 amino acids
Sequence
(BLAST)
(BLAST)
001: MALGKYARVD GRRSSSWCST VTVVMFVALC LVGVWMMTSS SVVPVRNGDE AQENKNQVKE QAEVKEAVSE VSNSNTRQFE DNPGDLPEDA TKGDSNVTFE
101: DNSNSSDKQE KLEENPVERS SDDTKTEDVD DKKTEEEGSN TENESNSDSV ENNKDSDETS TKESDSDESE KKPDSDDNKK SDSDESEKQS DDSDETTNTR
201: IEEKVEESDN KESDENFIEK NTNDDTKQKT SKEVYPSGAQ SELHEESTTE TGSWSTQAAE SKNEKESQES SKQATGYKWK LCNVTAGPDF IPCLDNWKAI
301: RSLRSTKHYE HRERHCPEEP PTCLVPVPEG YKRPIEWPKS REKIWYYNVP HTKLAKVKGH QNWVKVTGEY LTFPGGGTQF KHGALHYIDF IQETEPDIAW
401: GKRTRVILDV GCGVASFGGF LFDRDVLAMS LAPKDEHEAQ VQFALERGIP AISAVMGTKR LPFPGKVFDV VHCARCRVPW HIEGGKLLLE LNRVLRPGGF
501: FVWSATPIYQ KLPEDVEIWK AMKTLTKAMC WEVVSISKDQ VNGVGVAVYK KPTSNECYEQ RSKNEPPLCP DSDDPNAAWN IKLQACMHKV PASSKERGSK
601: LPELWPARLT KVPYWLLSSQ VGVYGKPAPE DFTADYEHWK RVVSQSYLDG MGIKWSNVRN VMDMRSIYGG FAAALRDLNV WVMNVVTIDS PDTLPIIFER
701: GLFGIYHDWC ESFSTYPRTY DLLHADHLFS KLKKRCNLAA VVAEADRILR PEGKLIVRDT VEIVEELESM ARSMQWKVRM TYSKDKEGLL CVEKSKWRPK
801: EQEKLEYAIV
101: DNSNSSDKQE KLEENPVERS SDDTKTEDVD DKKTEEEGSN TENESNSDSV ENNKDSDETS TKESDSDESE KKPDSDDNKK SDSDESEKQS DDSDETTNTR
201: IEEKVEESDN KESDENFIEK NTNDDTKQKT SKEVYPSGAQ SELHEESTTE TGSWSTQAAE SKNEKESQES SKQATGYKWK LCNVTAGPDF IPCLDNWKAI
301: RSLRSTKHYE HRERHCPEEP PTCLVPVPEG YKRPIEWPKS REKIWYYNVP HTKLAKVKGH QNWVKVTGEY LTFPGGGTQF KHGALHYIDF IQETEPDIAW
401: GKRTRVILDV GCGVASFGGF LFDRDVLAMS LAPKDEHEAQ VQFALERGIP AISAVMGTKR LPFPGKVFDV VHCARCRVPW HIEGGKLLLE LNRVLRPGGF
501: FVWSATPIYQ KLPEDVEIWK AMKTLTKAMC WEVVSISKDQ VNGVGVAVYK KPTSNECYEQ RSKNEPPLCP DSDDPNAAWN IKLQACMHKV PASSKERGSK
601: LPELWPARLT KVPYWLLSSQ VGVYGKPAPE DFTADYEHWK RVVSQSYLDG MGIKWSNVRN VMDMRSIYGG FAAALRDLNV WVMNVVTIDS PDTLPIIFER
701: GLFGIYHDWC ESFSTYPRTY DLLHADHLFS KLKKRCNLAA VVAEADRILR PEGKLIVRDT VEIVEELESM ARSMQWKVRM TYSKDKEGLL CVEKSKWRPK
801: EQEKLEYAIV
001: MAMGKYSRVD GKKSSGYGLT ITIVLIVSLC LVGAWMFMSS WSAPTESIDF SANERTKDVD TTKSDFKSEE VDRGSKSFPD EKNEETEVVT ETNEEKTDPE
101: KSGEENSGEK TESAEERKEF DDKNGDGDRK NGDGEKDTES ESDETKQKEK TQLEESSEEN KSEDSNGTEE NAGESEENTE KKSEENAGET EESTEKSKDV
201: FPAGDQAEIT KESSTGSGAW STQLVESQNE KKAQVSSIKW KVCNVTAGPD YIPCLDNWQA IRKLHSTKHY EHRERHCPEE SPRCLVSLPE GYKRSIKWPK
301: SREKIWYTNI PHTKLAEVKG HQNWVKMSGE YLTFPGGGTQ FKNGALHYID FLQESYPDIA WGNRTRVILD VGCGVASFGG YLFDRDVLAL SFAPKDEHEA
401: QVQFALERGI PAMSNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKTEEDVGIW KAMSKLTKAM CWELMTIKKD
501: ELNEVGAAIY QKPMSNKCYN ERSQNEPPLC KDSDDQNAAW NVPLEACIHK VTEDSSKRGA VWPESWPERV ETVPQWLDSQ EGVYGKPAQE DFTADHERWK
601: TIVSKSYLNG MGIDWSYVRN VMDMRAVYGG FAAALKDLKL WVMNVVPIDS PDTLPIIYER GLFGIYHDWC ESFSTYPRTY DLLHADHLFS SLKKRCNLVG
701: VMAEVDRILR PQGTFIVRDD METIGEIEKM VKSMKWNVRM THSKDGEGLL SVQKSWWRPT EAETIQSAIA
101: KSGEENSGEK TESAEERKEF DDKNGDGDRK NGDGEKDTES ESDETKQKEK TQLEESSEEN KSEDSNGTEE NAGESEENTE KKSEENAGET EESTEKSKDV
201: FPAGDQAEIT KESSTGSGAW STQLVESQNE KKAQVSSIKW KVCNVTAGPD YIPCLDNWQA IRKLHSTKHY EHRERHCPEE SPRCLVSLPE GYKRSIKWPK
301: SREKIWYTNI PHTKLAEVKG HQNWVKMSGE YLTFPGGGTQ FKNGALHYID FLQESYPDIA WGNRTRVILD VGCGVASFGG YLFDRDVLAL SFAPKDEHEA
401: QVQFALERGI PAMSNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKTEEDVGIW KAMSKLTKAM CWELMTIKKD
501: ELNEVGAAIY QKPMSNKCYN ERSQNEPPLC KDSDDQNAAW NVPLEACIHK VTEDSSKRGA VWPESWPERV ETVPQWLDSQ EGVYGKPAQE DFTADHERWK
601: TIVSKSYLNG MGIDWSYVRN VMDMRAVYGG FAAALKDLKL WVMNVVPIDS PDTLPIIYER GLFGIYHDWC ESFSTYPRTY DLLHADHLFS SLKKRCNLVG
701: VMAEVDRILR PQGTFIVRDD METIGEIEKM VKSMKWNVRM THSKDGEGLL SVQKSWWRPT EAETIQSAIA
Arabidopsis Description
Probable methyltransferase PMT24 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR7]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.