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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 2
  • mitochondrion 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:nucleus
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d012211_P008 Maize plastid 94.44 94.32
HORVU3Hr1G090970.1 Barley cytosol, golgi, mitochondrion, plastid, vacuole 83.69 81.93
Os01t0883900-02 Rice golgi, mitochondrion, plasma membrane, vacuole 83.31 81.76
TraesCS3A01G406100.1 Wheat plastid 83.31 81.56
TraesCS3D01G401300.2 Wheat golgi 82.68 81.44
TraesCS3B01G439800.3 Wheat cytosol, golgi, mitochondrion, plastid, vacuole 82.68 81.44
CDY43336 Canola cytosol 17.32 71.35
Bra010830.1-P Field mustard golgi 56.64 65.69
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 56.76 65.36
EES11713 Sorghum plastid 58.03 65.01
GSMUA_Achr8P30140_001 Banana nucleus 64.73 64.97
CDX99828 Canola golgi 58.66 61.87
CDX84330 Canola endoplasmic reticulum, plasma membrane 55.75 61.85
KRH53915 Soybean endoplasmic reticulum 62.71 61.54
KRH64022 Soybean endoplasmic reticulum 62.83 61.36
CDY48339 Canola cytosol 58.53 61.24
CDY44314 Canola endoplasmic reticulum 57.52 61.16
Bra032319.1-P Field mustard cytosol 58.15 61.09
CDX94669 Canola endoplasmic reticulum 57.65 60.88
GSMUA_Achr11P... Banana mitochondrion 64.1 60.86
Bra030140.1-P Field mustard endoplasmic reticulum, golgi, mitochondrion, plastid 57.52 60.67
AT1G29470.1 Thale cress golgi 58.91 60.52
CDY66721 Canola golgi 40.46 60.49
CDY31339 Canola plasma membrane 58.15 60.21
CDY39830 Canola plasma membrane 58.41 59.84
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 62.71 59.69
Solyc05g056580.2.1 Tomato golgi 60.68 59.04
KRH40943 Soybean golgi 62.83 59.03
AT2G34300.3 Thale cress endoplasmic reticulum, golgi, vacuole 57.4 58.96
PGSC0003DMT400059933 Potato golgi 60.56 58.92
VIT_04s0044g01670.t01 Wine grape cytosol 61.31 58.79
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 56.38 58.53
Bra005438.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 56.26 58.4
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 58.53 57.95
AT5G64030.1 Thale cress endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 60.05 57.3
Solyc04g063230.2.1 Tomato cytosol, endoplasmic reticulum, nucleus 55.5 57.16
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 59.29 55.83
PGSC0003DMT400006139 Potato nucleus 55.75 55.33
VIT_18s0001g01270.t01 Wine grape plasma membrane 60.68 54.67
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 54.87 52.04
KRH53330 Soybean endoplasmic reticulum 53.98 51.14
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 56.01 49.55
Bra024260.1-P Field mustard extracellular, mitochondrion, plasma membrane, vacuole 58.03 49.14
OQU77087 Sorghum mitochondrion 51.45 44.1
KXG23110 Sorghum endoplasmic reticulum 56.38 40.99
OQU91634 Sorghum endoplasmic reticulum, golgi 31.48 40.42
OQU87776 Sorghum endoplasmic reticulum, golgi 33.63 39.29
EES03874 Sorghum mitochondrion 33.88 38.95
KXG38879 Sorghum mitochondrion 29.46 38.58
EER94782 Sorghum endoplasmic reticulum, golgi, vacuole 29.71 38.52
EER93951 Sorghum peroxisome 30.72 38.15
EER96732 Sorghum endoplasmic reticulum, golgi 29.71 38.03
EER94413 Sorghum plasma membrane 29.33 37.85
EER89033 Sorghum cytosol 29.33 37.42
KXG26938 Sorghum endoplasmic reticulum, golgi, mitochondrion, plastid 27.43 37.03
OQU77908 Sorghum plasma membrane, plastid 28.95 36.88
KXG26943 Sorghum plastid 29.58 36.51
EES05735 Sorghum mitochondrion, plastid 30.72 36.49
EES08791 Sorghum golgi 28.19 35.34
OQU88046 Sorghum plastid 25.79 32.9
EER93372 Sorghum mitochondrion 35.27 21.3
Protein Annotations
Gene3D:3.40.50.150MapMan:35.1EntrezGene:8063145UniProt:C5XEL9ncoils:CoilEnsemblPlants:EES03991
ProteinID:EES03991ProteinID:EES03991.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008757
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0032259PFAM:PF03141PANTHER:PTHR10108
PANTHER:PTHR10108:SF1054InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesEnsemblPlantsGene:SORBI_3003G379600SUPFAM:SSF53335unigene:Sbi.3806
TMHMM:TMhelixUniParc:UPI0001A85371RefSeq:XP_002458871.1SEG:seg::
Description
hypothetical protein
Coordinates
chr3:-:69338902..69344550
Molecular Weight (calculated)
89220.9 Da
IEP (calculated)
5.027
GRAVY (calculated)
-0.729
Length
791 amino acids
Sequence
(BLAST)
001: MAFGRGGKMD GRRPSSTSSS FCTTTTVVVF VALCLVGAWM MTSSTVFPLE ISSNKKPVVK QQPAPVNFGA SQDNAGEGSE KFEDTDNNDA TMPEEPNNKD
101: ATMEEKFTEK PEEKPEEKEP EVPTEKAETK DMFDDANGKS EGRSDDMKND GDGEKSGEKK DDEITNESGD EKPDGESKDD QEEKPEGDAT QEEQPQIEEK
201: VEENGEKDQS SNSNEVFPDG AQSELLKESN TQNGSFPTQA AESKNEKEVQ ASSKSSGDAT SYSWKLCNSS ASTDYIPCLD NEKAIKKLRT TKHYEHRERH
301: CPEEPPTCLV PLPEGYKRPI EWPRSRDKVW YSNVPHTRLA EYKGHQNWVK VSGDYLLFPG GGTQFKNGAL HYIDTIQQAL PDIAWGKRSR VILDVGCGVA
401: SFGGYMFDRD VLTMSFAPKD EHEAQVQFAL ERGIPAISAV MGTKRLPYPS RVFDVIHCAR CRVPWHIEGG MLLLELNRLL RPGGYFVWSA TPVYQKLPED
501: VEIWNAMSTL TKSMCWKMVN KTKDKLNQVG MVIFQKPMDN ICYEKRSENN PPLCKESDDA DAAWNVPLEA CMHKLPVGSK VRGSKWPEFW PQRLEKTPFW
601: IDGSKVGVYG KPANEDFEAD NAHWKRVVSK SYVNGMGIDW SKVRNVMDMR AVYGGFAAAL RDQKVWVMNI VPIDSPDTLP IIYERGLFGM YHDWCESLST
701: YPRTYDLLHA DHLFSKLTKR CKLMAVFAEV DRVLRPQGKL IVRDTADTIN ELESMAKSLQ WEVRMTYTKG NEGLLCVEKS MWRPKELDAS T
Best Arabidopsis Sequence Match ( AT5G64030.1 )
(BLAST)
001: MAQPRYTRID NRRPSSNYCS TVTVVVFVAL CLVGIWMMTS SSVGPAQNVD EVSLDNKDGI KKQMTPPAEE GNGQKFEDAP VETPNEDKKG DGDASLPKED
101: ESSSKQDNQE EKKEEKTKEE FTPSSETKSE TEGGEDQKDD SKSENGGGGD LDEKKDLKDN SDEENPDTNE KQTKPETEDN ELGEDGENQK QFESDNGEKK
201: SIDDDKKSSD DDKENKTGNE DTETKTEKEN TETNVDVQVE QEGQSKNETS GDLSPPGAQL ELLNETTAQN GSFSTQATES KNEKEAQKGS GDKLDYKWAL
301: CNTTAGPDYI PCLDNVQAIR SLPSTKHYEH RERHCPDSPP TCLVPLPDGY KRPIEWPKSR EKIWYTNVPH TKLAEYKGHQ NWVKVTGEYL TFPGGGTQFK
401: HGALHYIDFI QESVPAIAWG KRSRVVLDVG CGVASFGGFL FDRDVITMSL APKDEHEAQV QFALERGIPA ISAVMGTTRL PFPGRVFDIV HCARCRVPWH
501: IEGGKLLLEL NRVLRPGGFF VWSATPVYQK KTEDVEIWKA MSELIKKMCW ELVSINKDTI NGVGVATYRK PTSNECYKNR SEPVPPICAD SDDPNASWKV
601: PLQACMHTAP EDKTQRGSQW PEQWPARLEK APFWLSSSQT GVYGKAAPED FSADYEHWKR VVTKSYLNGL GINWASVRNV MDMRAVYGGF AAALRDLKVW
701: VMNVVPIDSP DTLAIIYERG LFGIYHDWCE SFSTYPRSYD LLHADHLFSK LKQRCNLTAV IAEVDRVLRP EGKLIVRDDA ETIQQVEGMV KAMKWEVRMT
801: YSKEKEGLLS VQKSIWRPSE VETLTYAIG
Arabidopsis Description
Probable methyltransferase PMT26 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7V3]
SUBAcon: [mitochondrion,endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.