CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042499_P001	Maize	plastid	87.74	86.08
TraesCS3A01G395800.1	Wheat	endoplasmic reticulum	71.77	72.71
TraesCS3D01G389400.1	Wheat	endoplasmic reticulum	71.13	72.41
HORVU3Hr1G089210.3	Barley	vacuole	71.77	72.24
TraesCS3B01G427600.1	Wheat	cytosol	43.06	69.9
GSMUA_Achr5P25650_001	Banana	cytosol	35.81	57.51
CDX83493	Canola	golgi	32.9	49.28
CDY57187	Canola	cytosol	24.03	47.76
VIT_05s0124g00530.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, vacuole	45.48	45.85
Bra000296.1-P	Field mustard	plastid	40.48	45.72
KRH01812	Soybean	extracellular, plasma membrane, vacuole	41.45	44.7
AT2G43200.2	Thale cress	endoplasmic reticulum, golgi	42.42	43.04
CDY68187	Canola	mitochondrion	41.13	41.33
EER94782	Sorghum	endoplasmic reticulum, golgi, vacuole	40.0	40.66
KRH46879	Soybean	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	40.97	40.32
EER96732	Sorghum	endoplasmic reticulum, golgi	39.52	39.64
KXG38879	Sorghum	mitochondrion	37.74	38.74
EER89033	Sorghum	cytosol	38.71	38.71
KXG26943	Sorghum	plastid	40.0	38.69
EER93951	Sorghum	peroxisome	39.35	38.3
EES05735	Sorghum	mitochondrion, plastid	39.52	36.79
EES08791	Sorghum	golgi	37.1	36.45
KXG26938	Sorghum	endoplasmic reticulum, golgi, mitochondrion, plastid	34.35	36.35
EER94413	Sorghum	plasma membrane	35.0	35.4
OQU91634	Sorghum	endoplasmic reticulum, golgi	31.29	31.49
EES03874	Sorghum	mitochondrion	32.74	29.51
OQU77908	Sorghum	plasma membrane, plastid	28.71	28.66
EES11713	Sorghum	plastid	32.58	28.61
OQU87776	Sorghum	endoplasmic reticulum, golgi	29.19	26.74
EES03991	Sorghum	plastid	32.9	25.79
OQU77087	Sorghum	mitochondrion	33.06	22.21
EES08114	Sorghum	golgi, mitochondrion, plastid, vacuole	31.61	21.92
KXG23110	Sorghum	endoplasmic reticulum	33.06	18.84
EER93372	Sorghum	mitochondrion	29.68	14.05

Protein Annotations

EnsemblPlants:OQU88046	EnsemblPlantsGene:SORBI_3003G390100	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases
PANTHER:PTHR10108	PANTHER:PTHR10108:SF968	PFAM:PF03141	ProteinID:OQU88046	ProteinID:OQU88046.1	SEG:seg
SUPFAM:SSF101447	SUPFAM:SSF53335	UniParc:UPI0009DC8301	UniProt:A0A1W0W0Z2	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr3:-:70131393..70134570

Molecular Weight (calculated)

68123.2 Da

IEP (calculated)

8.514

GRAVY (calculated)

-0.300

Length

620 amino acids

Sequence
(BLAST)

001: MPLSVPSTPA VLKALPRALS LAAAVVAATT ASLLLICAVV SNSHHAASSS SPQLPPSASA STAALAPAPA PDGPDHHHPH PHPPPPVPPC PPNATHDVPC
101: HEPPSGERHC PPRPPPPPPH PPKDPPPHPP PPPPHCRVPP PPGYRPPPPW PARRDRARYA NVDLPPPPPV KVAAGLEQDP VRRRGEWLVF TEGVRDYVEQ
201: LERVVPLRGG VVRTALDIGC GVASFGDYLL NYGVLTMSIA PRNNRLGPQV QLALERGLPA MIGALVAHRL PYPSRSFDMV HCADCLVPWT AHDGLYILEI
301: DRLLQPGGYW VFSKPPVKWK STYNISNQGT RDMQNNQLAM DYMLNKLHWT RVSEEGTISV WRKPSCHLHC NQEANAKLLG LPPLCTGEDP DSAWYANISM
401: CMTCIPRAET FNGCAGGAME KWPKRLHAVP PRITSGEMKG LSIQRYKYDT LIWEKRVNFY LTYLKYLSNG TYRNVMDMSA GFGGFAAAMS KHPVWVMNVV
501: PANRTENTLG VIYERGLIGT YTDWCEAFST YPRTYDLIHG NGIFSSHIHK CGIIDILVEM DRVLRPGGAV IVRDRADVVL KVKKDADRLK WSSRVVDTEN
601: GPLDPEKLLI VDNSLPLRGS

Best Arabidopsis Sequence Match ( AT1G33170.1 )
(BLAST)

001: MAKENSSHSL AEAKRKRLTW ILCVSGLCIL SYVLGSWQTN TVPTSSSEAY SRMGCDETST TTRAQTTQTQ TNPSSDDTSS SLSSSEPVEL DFESHHKLEL
101: KITNQTVKYF EPCDMSLSEY TPCEDRERGR RFDRNMMKYR ERHCPSKDEL LYCLIPPPPN YKIPFKWPQS RDYAWYDNIP HKELSIEKAI QNWIQVEGER
201: FRFPGGGTMF PRGADAYIDD IARLIPLTDG AIRTAIDTGC GVASFGAYLL KRDIVAMSFA PRDTHEAQVQ FALERGVPAI IGIMGSRRLP YPARAFDLAH
301: CSRCLIPWFQ NDGLYLTEVD RVLRPGGYWI LSGPPINWKK YWKGWERSQE DLKQEQDSIE DAARSLCWKK VTEKGDLSIW QKPINHVECN KLKRVHKTPP
401: LCSKSDLPDF AWYKDLESCV TPLPEANSSD EFAGGALEDW PNRAFAVPPR IIGGTIPDIN AEKFREDNEV WKERISYYKQ IMPELSRGRF RNIMDMNAYL
501: GGFAAAMMKY PSWVMNVVPV DAEKQTLGVI FERGFIGTYQ DWCEGFSTYP RTYDLIHAGG LFSIYENRCD VTLILLEMDR ILRPEGTVVF RDTVEMLTKI
601: QSITNGMRWK SRILDHERGP FNPEKILLAV KSYWTGPSS

Arabidopsis Description

Probable methyltransferase PMT18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C884]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.