CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007592_P001	Maize	extracellular, golgi	71.0	89.78
TraesCS4B01G125500.1	Wheat	endoplasmic reticulum	79.4	81.07
TraesCS4D01G150500.1	Wheat	endoplasmic reticulum	79.08	80.74
HORVU4Hr1G033650.3	Barley	endoplasmic reticulum	78.61	78.98
TraesCS4A01G163200.1	Wheat	endoplasmic reticulum	77.97	78.1
Os11t0601600-01	Rice	golgi	76.86	74.39
EER96732	Sorghum	endoplasmic reticulum, golgi	64.66	66.02
EER94782	Sorghum	endoplasmic reticulum, golgi, vacuole	60.7	62.79
KXG38879	Sorghum	mitochondrion	58.16	60.76
EER89033	Sorghum	cytosol	51.66	52.58
EER93951	Sorghum	peroxisome	51.19	50.71
KXG26943	Sorghum	plastid	51.19	50.39
EES05735	Sorghum	mitochondrion, plastid	51.19	48.5
KXG26938	Sorghum	endoplasmic reticulum, golgi, mitochondrion, plastid	39.78	42.83
EER94413	Sorghum	plasma membrane	40.41	41.6
OQU88046	Sorghum	plastid	36.45	37.1
OQU91634	Sorghum	endoplasmic reticulum, golgi	35.02	35.88
EES03874	Sorghum	mitochondrion	36.13	33.14
OQU77908	Sorghum	plasma membrane, plastid	31.85	32.37
EES11713	Sorghum	plastid	35.02	31.3
OQU87776	Sorghum	endoplasmic reticulum, golgi	30.9	28.8
EES03991	Sorghum	plastid	35.34	28.19
EES08114	Sorghum	golgi, mitochondrion, plastid, vacuole	34.71	24.5
OQU77087	Sorghum	mitochondrion	35.34	24.16
KXG23110	Sorghum	endoplasmic reticulum	35.5	20.59
EER93372	Sorghum	mitochondrion	28.21	13.59

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	UniProt:C5Y5T4	EnsemblPlants:EES08791	ProteinID:EES08791	ProteinID:EES08791.2
GO:GO:0000032	GO:GO:0003674	GO:GO:0003824	GO:GO:0004476	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006139	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009298	GO:GO:0009987
GO:GO:0016740	GO:GO:0019538	GO:GO:0032259	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF999
InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3005G176700	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI00081ACDD9
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:65859875..65863291

Molecular Weight (calculated)

69585.0 Da

IEP (calculated)

7.777

GRAVY (calculated)

-0.273

Length

631 amino acids

Sequence
(BLAST)

001: MAMANKASSG ARSPLSLVVA MALCCFFYVL GAWQRSGYGK GDRIAAAVTR QTACGDGSAA VAAEHSFETH HGGAAGINAS TSLPFSADAP PPTFPPCAAA
101: LADHTPCHDQ DRAMKFPRKN MVYRERHCPA DGDRLRCLVP APPGYVTPFP WPRSRDYVPF ANAPYKSLTV EKAVQNWVQY EGAVFRFPGG GTQFPQGADK
201: YIDQLGSIVP FAGGHVRTVL DTGCGVASLG AYLDARGVIA MSFAPRDSHE AQVQFALERG VPAFIGVLGS VKLPFPPRSF DMAHCSRCLI PWGGNDGMYM
301: MEIDRVLRPG GYWVLSGPPI NWKTNHKAWE RTEADLSAEQ QRIEEYAAML CWEKVTEVRE IGIWRKQLDP SAAGCPARPP VRTCHDANPD DVWYKNMETC
401: VTPPATSGAG ELQPFPARLT AVPPRISAGA VPGFTTESYE EENRRWERHV AAYKKVNYKL NSERYRNIMD MNAGVGGFAA AIFSPKSWVM NVVPTAAELS
501: TLGVVYERGL IGMYHDWCEA FSTYPRTYDL IHANGIFTLY KDRCKMEDIL LEMDRILRPE GTVILRDHVD ILLKVQRTVK GMRWKTLLAN HEDSLNIPEK
601: VLFAVKLYWT AGEGSEEKKK TDSSSVAGKD S

Best Arabidopsis Sequence Match ( AT1G26850.2 )
(BLAST)

001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH

Arabidopsis Description

Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.