Factsheet for TraesCS4B01G125500.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 5
extracellular 3
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G150500.1	Wheat	endoplasmic reticulum	98.06	98.06
HORVU4Hr1G033650.3	Barley	endoplasmic reticulum	94.66	93.15
TraesCS4A01G163200.1	Wheat	endoplasmic reticulum	94.66	92.86
EES08791	Sorghum	golgi	81.07	79.4
Zm00001d007592_P001	Maize	extracellular, golgi	61.65	76.35
Os11t0601600-01	Rice	golgi	78.8	74.69
TraesCS5B01G225500.1	Wheat	cytosol, endoplasmic reticulum, golgi	65.21	65.64
TraesCS5B01G423200.2	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	62.78	62.48
TraesCS1B01G226800.1	Wheat	endoplasmic reticulum, golgi	60.68	62.09
TraesCS2B01G418400.1	Wheat	golgi	54.05	52.35
TraesCS6B01G269400.1	Wheat	mitochondrion, plastid	53.07	51.01
TraesCS6B01G029000.1	Wheat	cytosol	50.0	48.97
TraesCS3B01G427600.1	Wheat	cytosol	29.77	48.17
TraesCS2B01G419000.1	Wheat	golgi, plastid	39.64	42.39
TraesCS1B01G213600.1	Wheat	endoplasmic reticulum	39.97	38.78
TraesCS1B01G170600.2	Wheat	endoplasmic reticulum, golgi	36.08	36.2
TraesCS7B01G342700.1	Wheat	plastid	35.76	36.05
TraesCS1B01G250100.1	Wheat	plasma membrane	33.5	34.79
TraesCS3B01G395100.1	Wheat	plastid	35.92	31.4
TraesCS1B01G305900.1	Wheat	mitochondrion	33.01	30.58
TraesCS3B01G380800.1	Wheat	plastid	33.98	29.25
TraesCS3B01G439800.3	Wheat	cytosol, golgi, mitochondrion, plastid, vacuole	37.38	28.77
TraesCS7B01G286500.1	Wheat	mitochondrion	36.41	24.62
TraesCS4B01G098500.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	35.6	24.55
TraesCS5B01G413400.3	Wheat	mitochondrion	28.48	24.38
TraesCS5B01G120300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	35.76	21.69

Protein Annotations

EnsemblPlants:TraesCS4B01G125500.1	EnsemblPlantsGene:TraesCS4B01G125500	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	ncoils:Coil
PANTHER:PTHR10108	PANTHER:PTHR10108:SF999	PFAM:PF03141	SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:155377685..155380099

Molecular Weight (calculated)

68928.4 Da

IEP (calculated)

7.895

GRAVY (calculated)

-0.358

Length

618 amino acids

Sequence
(BLAST)

001: MAIKGNSGEY KARSPLGMVI AVLLCCFFYV LGAWQRSGYG KGDRIAVAVT RQTACSGASA AGLSFETHHT GGLANATTSG LGGEPPPPCT AALADHTPCH
101: DQDRAMKFPR KNMVYRERHC PSDGERLRCL VPAPPGYVTP FPWPKSRDYV PYANAPYKSL TVEKAVQNWV QYEGAVFRFP GGGTQFPHGA DKYIDQLASI
201: VPFADGSVRT VLDTGCGVAS LGAYLDSRGV MAMSFAPRDS HEAQVQFALE RGVPAFIGVL GSVKLPFPPR SFDMAHCSRC LIPWSGNGGM YMMEVDRVLR
301: PGGYWVLSGP PINWKANHRK WERAEEDLAG EQKRIEEYAQ MLCWEKVTEM DEIGVWRKRT DTAACPAMPP EVRACDPANP DDVWYKNMET CITPSTTAAG
401: GELQPFPERL KAVPPRISSG AVQGFTAESY EEEKRRWERH VKAYRKVNYK LDTKRYRNIM DMNAGVGGFA AAIFSPMSWV MNVVPTTAEL STLGVIYERG
501: LIGIYHDWCE AFSTYPRTYD LIHANGVFSL YRDKCKMEDI LLEMDRILRP EGTVILRDDI DVLLRVDKVA TGMRWKTMMA NHEDSPHIRE KVLYAVKRYW
601: TADSDKSSQE KKATSSEV

Best Arabidopsis Sequence Match ( AT1G26850.1 )
(BLAST)

001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH

Arabidopsis Description

Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.