Factsheet for TraesCS1B01G170600.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G153300.1	Wheat	endoplasmic reticulum, golgi	99.03	99.03
TraesCS1A01G154400.2	Wheat	golgi	96.27	94.28
Os10t0477100-01	Rice	golgi	91.88	91.73
Zm00001d032703_P006	Maize	endoplasmic reticulum, golgi, vacuole	89.77	90.8
OQU91634	Sorghum	endoplasmic reticulum, golgi	90.58	90.58
Zm00001d014036_P002	Maize	endoplasmic reticulum	89.94	84.71
GSMUA_Achr6P36560_001	Banana	endoplasmic reticulum, golgi, vacuole	74.03	73.55
GSMUA_Achr1P20520_001	Banana	endoplasmic reticulum, golgi, vacuole	73.54	72.95
VIT_05s0049g01180.t01	Wine grape	endoplasmic reticulum, golgi	72.24	72.71
GSMUA_Achr5P21350_001	Banana	endoplasmic reticulum	73.05	72.46
PGSC0003DMT400034882	Potato	cytosol, endoplasmic reticulum, golgi, mitochondrion	72.73	72.37
KRH31698	Soybean	endoplasmic reticulum	73.38	72.32
VIT_07s0005g03630.t01	Wine grape	endoplasmic reticulum, golgi	72.73	72.26
Solyc09g090190.2.1	Tomato	nucleus	72.4	72.17
KRH69085	Soybean	endoplasmic reticulum, golgi	73.21	72.16
PGSC0003DMT400044353	Potato	endoplasmic reticulum, golgi	72.24	72.01
CDX94861	Canola	endoplasmic reticulum, golgi	70.29	71.81
AT3G23300.1	Thale cress	endoplasmic reticulum, golgi, vacuole	71.1	71.69
Solyc03g005600.2.1	Tomato	nucleus, unclear	72.08	71.61
Bra001909.1-P	Field mustard	endoplasmic reticulum, golgi	70.29	71.45
CDX92981	Canola	endoplasmic reticulum, golgi	70.29	71.45
CDY18232	Canola	endoplasmic reticulum, golgi, plasma membrane	71.92	71.45
CDY15505	Canola	endoplasmic reticulum, golgi	71.75	71.29
KRG92410	Soybean	endoplasmic reticulum, golgi	71.75	71.29
AT4G14360.2	Thale cress	endoplasmic reticulum, golgi	70.29	71.22
CDX85084	Canola	endoplasmic reticulum, golgi, vacuole	70.62	71.19
CDX86634	Canola	endoplasmic reticulum, golgi	71.59	71.13
CDX89824	Canola	endoplasmic reticulum, golgi	71.43	70.97
Bra030570.1-P	Field mustard	endoplasmic reticulum, golgi	71.43	70.97
CDY68608	Canola	endoplasmic reticulum, golgi, vacuole	70.62	70.96
KRH34393	Soybean	endoplasmic reticulum	71.43	70.85
Bra014936.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	70.45	70.8
KRH19571	Soybean	golgi	68.02	70.66
Bra015316.1-P	Field mustard	endoplasmic reticulum, golgi	71.43	70.63
AT1G04430.1	Thale cress	endoplasmic reticulum, golgi	71.27	70.47
KRH32196	Soybean	golgi	67.69	70.44
KRG95687	Soybean	cytosol, golgi, plasma membrane, plastid	69.64	68.75
KRH67404	Soybean	endoplasmic reticulum, golgi, plasma membrane	69.48	67.3
TraesCS7B01G342700.1	Wheat	plastid	56.82	57.1
TraesCS1B01G250100.1	Wheat	plasma membrane	39.94	41.34
TraesCS3B01G427600.1	Wheat	cytosol	25.16	40.58
TraesCS5B01G225500.1	Wheat	cytosol, endoplasmic reticulum, golgi	37.99	38.11
TraesCS5B01G423200.2	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	38.31	38.0
TraesCS1B01G226800.1	Wheat	endoplasmic reticulum, golgi	37.18	37.91
TraesCS2B01G419000.1	Wheat	golgi, plastid	35.23	37.54
TraesCS6B01G029000.1	Wheat	cytosol	37.82	36.93
TraesCS2B01G418400.1	Wheat	golgi	37.82	36.52
TraesCS3B01G395100.1	Wheat	plastid	41.88	36.49
TraesCS4B01G125500.1	Wheat	endoplasmic reticulum	36.2	36.08
TraesCS6B01G269400.1	Wheat	mitochondrion, plastid	36.53	34.99
TraesCS1B01G213600.1	Wheat	endoplasmic reticulum	34.9	33.75
TraesCS1B01G305900.1	Wheat	mitochondrion	35.39	32.68
TraesCS3B01G439800.3	Wheat	cytosol, golgi, mitochondrion, plastid, vacuole	40.58	31.13
TraesCS3B01G380800.1	Wheat	plastid	35.23	30.22
TraesCS5B01G413400.3	Wheat	mitochondrion	31.01	26.45
TraesCS4B01G098500.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	37.5	25.78
TraesCS7B01G286500.1	Wheat	mitochondrion	37.82	25.49
TraesCS5B01G120300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	36.53	22.08

Protein Annotations

EnsemblPlants:TraesCS1B01G170600.2	EnsemblPlantsGene:TraesCS1B01G170600	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	PANTHER:PTHR10108
PANTHER:PTHR10108:SF704	PFAM:PF03141	SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr1B:-:302759423..302763584

Molecular Weight (calculated)

69865.6 Da

IEP (calculated)

6.814

GRAVY (calculated)

-0.408

Length

616 amino acids

Sequence
(BLAST)

001: MRGRNDGGQS KKPVVLFCIM VVCLCLLFLY FSGSNGQAGS AALEYGTKFS RSLGWGSDGD GDDGSDESIF GTGDANDVKL KSFPVCDDRH SELIPCLDRN
101: LIYQMRLKLD LNLMEHYERH CPPPERRFNC LIPPPHGYKV PIKWPKSRDI VWKANIPHTH LAKEKSDQNW MIDAGEKIKF PGGGTHFHHG ADKYISSIAN
201: MLNFKDNIIN NEGMLRTVLD VGCGVASFGG YLLSSNVIAM SLAPNDVHQN QIQFALERGI PAYLGVLGTK RLPYPSRSFE LAHCSRCRID WLQRDGILML
301: ELDRLLRPGG YFAYSSPEAY AQDEEDRRIW KEMSSLAERM CWKIAEKKNQ TVIWVKPLNN DCYRSRPRGT NPPLCKSGDD PDSVWGVTME ACITPYPEQM
401: HRDGGSGLAP WPARLTTPPP RLADLYVTAD TFEKDTEMWQ QRVDNYWNLL RPKVKPESIR NIMDMKANFG SFAAALKEKD VWVMNAVSHD GPNTLKIIYD
501: RGLIGSTHDW CEAFSTYPRT YDLLHAWTVF TDLEKRGCSA EDLLLEMDRI LRPTGFIIVR DKAPIIVFIK KYLNALHWEA VTVVDGESSR ESEENEMILI
601: IRKKLWLPEG GSQDST

Best Arabidopsis Sequence Match ( AT1G04430.2 )
(BLAST)

001: MMRGRSDGGL KKRLIASVCV VALFVCFLFM YYGSSSQGAS ALEYGRSLRK LGSSYLSGDD DNGDTKQDDS VANAEDSLVV AKSFPVCDDR HSEIIPCLDR
101: NFIYQMRLKL DLSLMEHYER HCPPPERRFN CLIPPPSGYK VPIKWPKSRD EVWKANIPHT HLAKEKSDQN WMVEKGEKIS FPGGGTHFHY GADKYIASIA
201: NMLNFSNDVL NDEGRLRTVL DVGCGVASFG AYLLASDIMT MSLAPNDVHQ NQIQFALERG IPAYLGVLGT KRLPYPSRSF EFAHCSRCRI DWLQRDGLLL
301: LELDRVLRPG GYFAYSSPEA YAQDEENLKI WKEMSALVER MCWRIAVKRN QTVVWQKPLS NDCYLEREPG TQPPLCRSDA DPDAVAGVSM EACITPYSKH
401: DHKTKGSGLA PWPARLTSSP PRLADFGYST DMFEKDTELW KQQVDSYWNL MSSKVKSNTV RNIMDMKAHM GSFAAALKDK DVWVMNVVSP DGPNTLKLIY
501: DRGLIGTNHN WCEAFSTYPR TYDLLHAWSI FSDIKSKGCS AEDLLIEMDR ILRPTGFVII RDKQSVVESI KKYLQALHWE TVASEKVNTS SELDQDSEDG
601: ENNVVFIVQK KLWLTSESLR DSE

Arabidopsis Description

Probable methyltransferase PMT8 [Source:UniProtKB/Swiss-Prot;Acc:Q940J9]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.