Factsheet for VIT_05s0049g01180.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 3
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92410	Soybean	endoplasmic reticulum, golgi	83.66	82.58
Solyc09g090190.2.1	Tomato	nucleus	83.17	82.36
PGSC0003DMT400044353	Potato	endoplasmic reticulum, golgi	83.01	82.2
KRH34393	Soybean	endoplasmic reticulum	83.33	82.13
KRH69085	Soybean	endoplasmic reticulum, golgi	83.66	81.92
KRH31698	Soybean	endoplasmic reticulum	83.17	81.44
PGSC0003DMT400034882	Potato	cytosol, endoplasmic reticulum, golgi, mitochondrion	82.35	81.42
VIT_07s0005g03630.t01	Wine grape	endoplasmic reticulum, golgi	82.19	81.13
Solyc03g005600.2.1	Tomato	nucleus, unclear	81.86	80.81
AT4G14360.2	Thale cress	endoplasmic reticulum, golgi	80.07	80.59
AT3G23300.1	Thale cress	endoplasmic reticulum, golgi, vacuole	79.74	79.87
CDX92981	Canola	endoplasmic reticulum, golgi	77.94	78.71
Bra001909.1-P	Field mustard	endoplasmic reticulum, golgi	77.94	78.71
CDX94861	Canola	endoplasmic reticulum, golgi	77.45	78.61
GSMUA_Achr1P20520_001	Banana	endoplasmic reticulum, golgi, vacuole	79.41	78.26
CDX85084	Canola	endoplasmic reticulum, golgi, vacuole	78.1	78.23
CDY68608	Canola	endoplasmic reticulum, golgi, vacuole	78.27	78.14
Bra014936.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	78.1	77.98
GSMUA_Achr6P36560_001	Banana	endoplasmic reticulum, golgi, vacuole	78.76	77.74
GSMUA_Achr5P21350_001	Banana	endoplasmic reticulum	76.96	75.85
Zm00001d032703_P006	Maize	endoplasmic reticulum, golgi, vacuole	74.02	74.38
Os10t0477100-01	Rice	golgi	74.35	73.74
OQU91634	Sorghum	endoplasmic reticulum, golgi	74.18	73.7
TraesCS1D01G153300.1	Wheat	endoplasmic reticulum, golgi	72.88	72.4
TraesCS1B01G170600.2	Wheat	endoplasmic reticulum, golgi	72.71	72.24
TraesCS1A01G154400.2	Wheat	golgi	71.41	69.48
Zm00001d014036_P002	Maize	endoplasmic reticulum	74.18	69.42
VIT_04s0023g02790.t01	Wine grape	cytosol	38.4	46.44
VIT_08s0007g05750.t01	Wine grape	endoplasmic reticulum, plasma membrane	42.32	43.09
VIT_05s0124g00530.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, vacuole	37.91	37.72
VIT_18s0001g01600.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	41.01	37.69
VIT_02s0012g00580.t01	Wine grape	endoplasmic reticulum, golgi	37.25	37.32
VIT_17s0000g06050.t01	Wine grape	cytosol	37.09	37.21
VIT_15s0048g01990.t01	Wine grape	mitochondrion	36.27	37.19
VIT_02s0025g03200.t01	Wine grape	cytosol	38.4	37.18
VIT_13s0019g02250.t01	Wine grape	golgi	41.67	37.17
VIT_16s0100g00570.t01	Wine grape	mitochondrion	39.38	36.74
VIT_13s0067g01690.t01	Wine grape	endoplasmic reticulum, golgi	36.11	36.47
VIT_02s0033g01120.t01	Wine grape	cytosol	35.46	36.17
VIT_01s0026g02340.t01	Wine grape	golgi	37.58	36.16
VIT_15s0048g01940.t01	Wine grape	mitochondrion	37.09	35.92
VIT_04s0044g01670.t01	Wine grape	cytosol	39.87	29.58
VIT_18s0001g12470.t01	Wine grape	mitochondrion	33.33	28.18
VIT_18s0001g01270.t01	Wine grape	plasma membrane	39.38	27.45

Protein Annotations

EntrezGene:100263157	wikigene:100263157	Gene3D:3.40.50.150	MapMan:35.1	EMBL:AM446872	ProteinID:CAN63166
ProteinID:CAN63166.1	ProteinID:CBI23655	ProteinID:CBI23655.3	UniProt:D7SZH8	EMBL:FN595496	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768
GO:GO:0005773	GO:GO:0005774	GO:GO:0005794	GO:GO:0005802	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008757	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0032259
EntrezGene:LOC100263157	wikigene:LOC100263157	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF704	InterPro:Put_SAM_MeTrfase
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TIGR:TC60201	TIGR:TC63489	TIGR:TC64490	TMHMM:TMhelix
UniParc:UPI00015C7520	ArrayExpress:VIT_05s0049g01180	EnsemblPlantsGene:VIT_05s0049g01180	EnsemblPlants:VIT_05s0049g01180.t01	unigene:Vvi.7632	RefSeq:XP_003632008
RefSeq:XP_003632008.1	RefSeq:XP_010650098.1	RefSeq:XP_010650099.1	RefSeq:XP_010650100.1	RefSeq:XP_010650101.1	RefSeq:XP_010650103.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:+:8274140..8280942

Molecular Weight (calculated)

69807.5 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.385

Length

612 amino acids

Sequence
(BLAST)

001: MRGRADGSQR RRLLPSLCVV AIFLVFLYVY HGSIFGSQKA LEYGSRSLRK LGLTGDDDAD LGSKLDESSS KFGQEDGEDD VMPKSIPVCD DRHSELIPCL
101: DRNLIYQMRL KLDLSLMEHY ERHCPLPERR YNCLIPPPAG YKIPIKWPKS RDEVWKANIP HTHLAHEKSD QNWMVVKGEK IVFPGGGTHF HYGADKYIAS
201: LANMLNFSNN NLNNGGRIRT VFDVGCGVAS FGAYLLSSDI ITMSLAPNDV HQNQIQFALE RGIPAYLGVL GTKRLPYPSR SFELAHCSRC RIDWLQRDGI
301: LLLELDRLLR PGGYFAYSSP EAYAQDEEDL RIWREMSALV ERMCWRIASK RNQTVIWQKP LTNDCYMERA PGTQPPLCRS DDDPDAVWGV PMEACITPYS
401: DHDHKSRGSE LAPWPARATA PPPRLADFGY SKDIFEKDTE VWMQRVESYW NLLSPKITSD TLRNLMDMKA NLGSFAAALK GKDVWVMNVV PEDGPNTLKL
501: IYDRGLIGTI HNWCEAFSTY PRTYDLLHAW TVFSDIEKKG CSAEDLLIEM DRILRPTGFV IIRDKPSVIE FVKKYLTALH WEAVSNERDG DELVFLIQKK
601: IWLTSESLRD TE

Best Arabidopsis Sequence Match ( AT1G04430.2 )
(BLAST)

001: MMRGRSDGGL KKRLIASVCV VALFVCFLFM YYGSSSQGAS ALEYGRSLRK LGSSYLSGDD DNGDTKQDDS VANAEDSLVV AKSFPVCDDR HSEIIPCLDR
101: NFIYQMRLKL DLSLMEHYER HCPPPERRFN CLIPPPSGYK VPIKWPKSRD EVWKANIPHT HLAKEKSDQN WMVEKGEKIS FPGGGTHFHY GADKYIASIA
201: NMLNFSNDVL NDEGRLRTVL DVGCGVASFG AYLLASDIMT MSLAPNDVHQ NQIQFALERG IPAYLGVLGT KRLPYPSRSF EFAHCSRCRI DWLQRDGLLL
301: LELDRVLRPG GYFAYSSPEA YAQDEENLKI WKEMSALVER MCWRIAVKRN QTVVWQKPLS NDCYLEREPG TQPPLCRSDA DPDAVAGVSM EACITPYSKH
401: DHKTKGSGLA PWPARLTSSP PRLADFGYST DMFEKDTELW KQQVDSYWNL MSSKVKSNTV RNIMDMKAHM GSFAAALKDK DVWVMNVVSP DGPNTLKLIY
501: DRGLIGTNHN WCEAFSTYPR TYDLLHAWSI FSDIKSKGCS AEDLLIEMDR ILRPTGFVII RDKQSVVESI KKYLQALHWE TVASEKVNTS SELDQDSEDG
601: ENNVVFIVQK KLWLTSESLR DSE

Arabidopsis Description

Probable methyltransferase PMT8 [Source:UniProtKB/Swiss-Prot;Acc:Q940J9]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.