Factsheet for VIT_04s0044g01670.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0023g02790.t01	Wine grape	cytosol	44.97	73.32
KRH64022	Soybean	endoplasmic reticulum	66.91	68.15
GSMUA_Achr8P32550_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	55.15	68.01
KRH53915	Soybean	endoplasmic reticulum	66.42	67.99
Os12t0178300-00	Rice	cytosol	21.7	67.55
CDY31339	Canola	plasma membrane	61.45	66.36
CDY39830	Canola	plasma membrane	61.7	65.93
KRH59591	Soybean	golgi, mitochondrion, plasma membrane, plastid, vacuole	66.18	65.7
Solyc05g056580.2.1	Tomato	golgi	64.24	65.19
PGSC0003DMT400059933	Potato	golgi	64.24	65.19
KRH40943	Soybean	golgi	66.06	64.73
GSMUA_Achr7P23260_001	Banana	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	57.09	64.52
Zm00001d002943_P002	Maize	plasma membrane	51.76	63.64
GSMUA_Achr8P30140_001	Banana	nucleus	60.48	63.32
AT5G64030.1	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	62.91	62.61
CDY43782	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	60.36	62.33
EES11713	Sorghum	plastid	53.09	62.04
TraesCS2D01G569900.1	Wheat	plastid	52.85	62.02
Os04t0692400-01	Rice	mitochondrion, peroxisome	50.67	61.74
EES03991	Sorghum	plastid	58.79	61.31
VIT_18s0001g01270.t01	Wine grape	plasma membrane	65.21	61.28
TraesCSU01G022400.1	Wheat	plastid	52.24	61.13
TraesCS3D01G401300.2	Wheat	golgi	59.03	60.65
TraesCS3B01G439800.3	Wheat	cytosol, golgi, mitochondrion, plastid, vacuole	59.03	60.65
HORVU3Hr1G090970.1	Barley	cytosol, golgi, mitochondrion, plastid, vacuole	59.39	60.64
CDX84478	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	61.58	60.48
TraesCS3A01G406100.1	Wheat	plastid	59.15	60.4
Zm00001d012211_P008	Maize	plastid	57.94	60.35
Os01t0883900-02	Rice	golgi, mitochondrion, plasma membrane, vacuole	58.42	59.8
GSMUA_Achr11P...	Banana	mitochondrion	59.15	58.58
TraesCS2A01G560300.1	Wheat	mitochondrion, peroxisome, plastid	52.12	58.11
HORVU2Hr1G127220.1	Barley	cytosol	52.85	56.11
Bra024260.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	60.48	53.43
GSMUA_Achr8P08230_001	Banana	cytosol, endoplasmic reticulum, golgi, mitochondrion	56.24	52.91
Os11t0186300-01	Rice	plasma membrane	53.94	51.33
HORVU4Hr1G017470.1	Barley	vacuole	53.09	49.1
TraesCS4B01G098500.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole	53.21	49.0
EES08114	Sorghum	golgi, mitochondrion, plastid, vacuole	53.09	48.99
Zm00001d004720_P001	Maize	golgi	53.58	48.79
TraesCS4D01G094600.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole	52.73	48.71
TraesCS4A01G220000.1	Wheat	golgi	52.61	48.55
VIT_13s0067g01690.t01	Wine grape	endoplasmic reticulum, golgi	35.64	48.51
HORVU5Hr1G037320.6	Barley	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid	52.36	46.35
VIT_18s0001g12470.t01	Wine grape	mitochondrion	38.42	43.78
Zm00001d041844_P021	Maize	golgi, mitochondrion, nucleus, plasma membrane, plastid	54.91	42.9
TraesCS5D01G127100.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	52.85	42.87
TraesCS5B01G120300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	52.48	42.49
TraesCS5A01G114100.1	Wheat	endoplasmic reticulum	52.48	41.67
KXG23110	Sorghum	endoplasmic reticulum	54.42	41.27
VIT_07s0005g03630.t01	Wine grape	endoplasmic reticulum, golgi	30.3	40.32
VIT_05s0049g01180.t01	Wine grape	endoplasmic reticulum, golgi	29.58	39.87
VIT_15s0048g01990.t01	Wine grape	mitochondrion	27.39	37.86
VIT_18s0001g01600.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	30.42	37.69
VIT_13s0019g02250.t01	Wine grape	golgi	31.27	37.61
VIT_08s0007g05750.t01	Wine grape	endoplasmic reticulum, plasma membrane	27.03	37.1
VIT_02s0012g00580.t01	Wine grape	endoplasmic reticulum, golgi	27.39	36.99
VIT_02s0033g01120.t01	Wine grape	cytosol	26.79	36.83
VIT_17s0000g06050.t01	Wine grape	cytosol	27.03	36.56
VIT_02s0025g03200.t01	Wine grape	cytosol	27.64	36.08
VIT_05s0124g00530.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, vacuole	26.67	35.77
VIT_15s0048g01940.t01	Wine grape	mitochondrion	27.15	35.44
VIT_01s0026g02340.t01	Wine grape	golgi	27.15	35.22
VIT_16s0100g00570.t01	Wine grape	mitochondrion	27.15	34.15

Protein Annotations

EntrezGene:100260142	wikigene:100260142	Gene3D:3.40.50.150	MapMan:35.1	EMBL:AM426499	EMBL:AM444554
ProteinID:CAN60873	ProteinID:CAN60873.1	ProteinID:CAN80052	ProteinID:CAN80052.1	ProteinID:CCB60393	ProteinID:CCB60393.1
UniProt:F6I0C7	EMBL:FN596506	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0032259	EntrezGene:LOC100260142	wikigene:LOC100260142	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF1060
InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TIGR:TC62481	TIGR:TC64472	TMHMM:TMhelix
UniParc:UPI0001983196	ArrayExpress:VIT_04s0044g01670	EnsemblPlantsGene:VIT_04s0044g01670	EnsemblPlants:VIT_04s0044g01670.t01	unigene:Vvi.5820	RefSeq:XP_002266357
RefSeq:XP_002266357.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4:-:23402111..23409732

Molecular Weight (calculated)

92337.9 Da

IEP (calculated)

4.705

GRAVY (calculated)

-0.644

Length

825 amino acids

Sequence
(BLAST)

001: MALGKYSRVD GRRSTTNYCS TATLVAFVAL CLVGVWMMTS SSVVPVQNSD VSTQETKDEV KQQVVESNDS DTRQFEDSSG DLTDDAKKGD GVSFTQDEKN
101: PNPQDNPAVP EKPSENGLEE KQEKPEEKLI NEEENKPEDG STNEAENGEN KSGDGEGDSK TEDANSDSGE TKTDGGESIA DGQGDSEGGS VEKKSELDDS
201: EKKSEENSFE TKDGDKVDGQ IEEKVEQNEN KDSEQNSGER KEDSEAKEQV SNEVFPSGAM SELLNETTTQ NGAFLTQAAE SKKEKESQQT VYSWKVCNVT
301: AGPDYIPCLD NLQAIKSLPS TKHYEHRERH CPNEPPTCLV SLPEGYKRPI EWPTSRDKIW YYNVPHTKLA EIKGHQNWVK VSGEFLTFPG GGTQFKNGAL
401: HYIEFIEESM PDIAWGKRSR VVLDVGCGVA SFGGYLFDKD VLTMSFAPKD EHEAQVQFAL ERGIPGISAV MGTKRLPFPA MVFDVVHCAR CRVPWHIEGG
501: KLLLELNRVL RPGGFFVWSA TPVYQKLADD VAIWNAMTEL MKSMCWELVV IKRDVVNRVA AAIYKKPTSN DCYEKRSQNE PPICADSEDA NAAWNVPLQA
601: CMHKVPVDAS KRGSQWPELW PARLDKSPYW LTSSQVGVYG RAAPEDFTAD YEHWKRVVAQ SYLNGIGISW SSVRNVMDMR AVYGGFAAAL RDLNVWVMNV
701: VSIDSPDTLP IIYERGLFGI YHNWCESFNT YPRSYDLLHA DHIFSKTKKK CNLVAVIAEA DRILRPEGKL IVRDDVETLG QVENMLRSMH WEIRMTYSKE
801: KEGLLCAQKT MWRPKEMEII KSAIA

Best Arabidopsis Sequence Match ( AT5G64030.1 )
(BLAST)

001: MAQPRYTRID NRRPSSNYCS TVTVVVFVAL CLVGIWMMTS SSVGPAQNVD EVSLDNKDGI KKQMTPPAEE GNGQKFEDAP VETPNEDKKG DGDASLPKED
101: ESSSKQDNQE EKKEEKTKEE FTPSSETKSE TEGGEDQKDD SKSENGGGGD LDEKKDLKDN SDEENPDTNE KQTKPETEDN ELGEDGENQK QFESDNGEKK
201: SIDDDKKSSD DDKENKTGNE DTETKTEKEN TETNVDVQVE QEGQSKNETS GDLSPPGAQL ELLNETTAQN GSFSTQATES KNEKEAQKGS GDKLDYKWAL
301: CNTTAGPDYI PCLDNVQAIR SLPSTKHYEH RERHCPDSPP TCLVPLPDGY KRPIEWPKSR EKIWYTNVPH TKLAEYKGHQ NWVKVTGEYL TFPGGGTQFK
401: HGALHYIDFI QESVPAIAWG KRSRVVLDVG CGVASFGGFL FDRDVITMSL APKDEHEAQV QFALERGIPA ISAVMGTTRL PFPGRVFDIV HCARCRVPWH
501: IEGGKLLLEL NRVLRPGGFF VWSATPVYQK KTEDVEIWKA MSELIKKMCW ELVSINKDTI NGVGVATYRK PTSNECYKNR SEPVPPICAD SDDPNASWKV
601: PLQACMHTAP EDKTQRGSQW PEQWPARLEK APFWLSSSQT GVYGKAAPED FSADYEHWKR VVTKSYLNGL GINWASVRNV MDMRAVYGGF AAALRDLKVW
701: VMNVVPIDSP DTLAIIYERG LFGIYHDWCE SFSTYPRSYD LLHADHLFSK LKQRCNLTAV IAEVDRVLRP EGKLIVRDDA ETIQQVEGMV KAMKWEVRMT
801: YSKEKEGLLS VQKSIWRPSE VETLTYAIG

Arabidopsis Description

Probable methyltransferase PMT26 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7V3]
SUBAcon: [mitochondrion,endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.