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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole, mitochondrion, plastid, cytosol, golgi

Predictor Summary:
  • nucleus 2
  • plastid 1
  • mitochondrion 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, mitochondrion, plastid, vacuole
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:nucleus
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:vacuole
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G406100.1 Wheat plastid 96.91 96.91
TraesCS3B01G439800.3 Wheat cytosol, golgi, mitochondrion, plastid, vacuole 95.92 96.51
TraesCS3D01G401300.2 Wheat golgi 95.79 96.39
EES03991 Sorghum plastid 81.93 83.69
Os01t0883900-02 Rice golgi, mitochondrion, plasma membrane, vacuole 83.42 83.62
Zm00001d012211_P008 Maize plastid 81.06 82.7
CDY43336 Canola cytosol 17.08 71.88
Bra010830.1-P Field mustard golgi 55.2 65.4
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 55.32 65.07
GSMUA_Achr8P30140_001 Banana nucleus 62.25 63.83
CDX84330 Canola endoplasmic reticulum, plasma membrane 54.46 61.71
CDY44314 Canola endoplasmic reticulum 56.68 61.56
CDX99828 Canola golgi 56.81 61.2
Bra030140.1-P Field mustard endoplasmic reticulum, golgi, mitochondrion, plastid 56.81 61.2
KRH53915 Soybean endoplasmic reticulum 61.01 61.17
CDX94669 Canola endoplasmic reticulum 56.68 61.15
CDY31339 Canola plasma membrane 57.55 60.86
CDY48339 Canola cytosol 56.93 60.85
GSMUA_Achr11P... Banana mitochondrion 62.62 60.74
KRH64022 Soybean endoplasmic reticulum 60.77 60.62
Bra032319.1-P Field mustard cytosol 56.44 60.56
AT1G29470.1 Thale cress golgi 57.67 60.52
CDY39830 Canola plasma membrane 57.67 60.36
CDY66721 Canola golgi 39.48 60.3
PGSC0003DMT400059933 Potato golgi 60.02 59.66
Solyc05g056580.2.1 Tomato golgi 59.9 59.53
VIT_04s0044g01670.t01 Wine grape cytosol 60.64 59.39
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 61.01 59.33
AT2G34300.3 Thale cress endoplasmic reticulum, golgi, vacuole 56.19 58.96
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 55.57 58.92
Bra005438.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 55.45 58.79
HORVU2Hr1G127220.1 Barley cytosol 56.44 58.69
AT5G64030.1 Thale cress endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 59.9 58.38
KRH40943 Soybean golgi 60.77 58.31
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 57.05 57.7
Solyc04g063230.2.1 Tomato cytosol, endoplasmic reticulum, nucleus 54.33 57.16
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 58.17 55.95
VIT_18s0001g01270.t01 Wine grape plasma membrane 60.15 55.35
PGSC0003DMT400006139 Potato nucleus 54.33 55.08
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 54.7 53.0
KRH53330 Soybean endoplasmic reticulum 54.08 52.34
HORVU4Hr1G017470.1 Barley vacuole 54.7 49.55
Bra024260.1-P Field mustard extracellular, mitochondrion, plasma membrane, vacuole 56.68 49.04
HORVU0Hr1G021970.3 Barley cytosol, nucleus 47.65 47.95
HORVU1Hr1G070430.8 Barley golgi, plasma membrane, vacuole 37.25 45.88
HORVU5Hr1G037320.6 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid 52.85 45.82
HORVU2Hr1G095070.1 Barley cytosol 23.02 42.96
HORVU5Hr1G102720.2 Barley cytosol 26.49 41.88
HORVU6Hr1G056160.1 Barley cytosol 23.02 40.09
HORVU3Hr1G088050.14 Barley endoplasmic reticulum, plasma membrane 36.51 39.44
HORVU7Hr1G100920.3 Barley plastid 28.96 39.13
HORVU5Hr1G099090.3 Barley mitochondrion 34.28 38.69
HORVU5Hr1G065680.2 Barley cytosol, endoplasmic reticulum, golgi 29.21 38.44
HORVU1Hr1G057520.1 Barley plastid 28.71 38.41
HORVU1Hr1G051470.3 Barley endoplasmic reticulum 28.84 38.13
HORVU2Hr1G095160.7 Barley plastid 27.6 37.23
HORVU6Hr1G065360.4 Barley mitochondrion 29.58 37.05
HORVU3Hr1G085900.1 Barley golgi, plastid 34.16 36.9
HORVU4Hr1G033650.3 Barley endoplasmic reticulum 28.22 36.31
HORVU3Hr1G089210.3 Barley vacuole 25.99 34.09
HORVU1Hr1G054470.1 Barley mitochondrion, plastid 26.11 33.81
HORVU7Hr1G003860.2 Barley plasma membrane 29.58 33.76
HORVU6Hr1G003900.3 Barley cytosol 29.7 32.3
Protein Annotations
Gene3D:3.40.50.150MapMan:35.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0032259
EnsemblPlantsGene:HORVU3Hr1G090970EnsemblPlants:HORVU3Hr1G090970.1UniProt:M0X2A8PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF1054
InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI00029652BASEG:seg
Description
No Description!
Coordinates
chrchr3H:+:634071757..634076912
Molecular Weight (calculated)
90909.6 Da
IEP (calculated)
5.062
GRAVY (calculated)
-0.760
Length
808 amino acids
Sequence
(BLAST)
001: MAFGRGGKMD GRRPSSPSSS LCTTTTVVVF VALCVVGAWM MTSSTVFPVE PTSNKRSEPL EVSTSNKKTE VKDQRAEVGF GETEETATSG NAGSEKFEDT
101: DNNDNVPDES HSNRDAPEEE KFTENTMEKP VEMSEEKEPP KEKEDSKDSF DDANGKSEGH SAKEGGESGD EEEKSEERKD KETNTDNDVE KSDGEKKEDQ
201: EGKSEDDATE QPQIEEKVEE SGEKEPAAKA NEVFPDGAQS ELLKESNTEN GSFPTQAAES KNEKEAQAAS KSSGDEITYS WKLCNSSAVT DYIPCLDNEK
301: AIKKLHSTKH YEHRERHCPE EPPTCLVPLP EGYKRPIEWP KSRDKVWYSN VPHTKLAEYK GHQNWVKVSG DHLLFPGGGT QFKNGALHYI DTIQQALPDI
401: AWGKRSRVIL DVGCGVASFG GYMFDRDVLT MSFAPKDEHE AQVQFALERG IPAISAVMGT KRLPYPSRVF DVIHCARCRV PWHIEGGKLL LELNRLLRPG
501: GYFVWSATPV YQKLPEDVEI WNAMSSLTKS MCWKMVKKTK DTLNQVGMAI YQKPMDNNCY EKRSEDSPPL CKETDDADAA WNVPLQACIP KLPPGPSVRG
601: SKWPEMWPQR LEKTPFWIDG SRVGVYGKPA NEDFEADYAH WKRVVSKSYV NGMGIDWSKV RNVMDMRAVY GGFAAALRDQ KVWVMNIVPI DSPDTLPIVY
701: ERGLFGMYHD WCESFSTYPR TYDLLHADHL FSKLKKRCKL LGVFAEVDRI LRPEGKLIVR DDAETIRALE GMAKSLQWEV RMTYATGKEG LLCVQKTTWR
801: PKEIEASM
Best Arabidopsis Sequence Match ( AT5G64030.1 )
(BLAST)
001: MAQPRYTRID NRRPSSNYCS TVTVVVFVAL CLVGIWMMTS SSVGPAQNVD EVSLDNKDGI KKQMTPPAEE GNGQKFEDAP VETPNEDKKG DGDASLPKED
101: ESSSKQDNQE EKKEEKTKEE FTPSSETKSE TEGGEDQKDD SKSENGGGGD LDEKKDLKDN SDEENPDTNE KQTKPETEDN ELGEDGENQK QFESDNGEKK
201: SIDDDKKSSD DDKENKTGNE DTETKTEKEN TETNVDVQVE QEGQSKNETS GDLSPPGAQL ELLNETTAQN GSFSTQATES KNEKEAQKGS GDKLDYKWAL
301: CNTTAGPDYI PCLDNVQAIR SLPSTKHYEH RERHCPDSPP TCLVPLPDGY KRPIEWPKSR EKIWYTNVPH TKLAEYKGHQ NWVKVTGEYL TFPGGGTQFK
401: HGALHYIDFI QESVPAIAWG KRSRVVLDVG CGVASFGGFL FDRDVITMSL APKDEHEAQV QFALERGIPA ISAVMGTTRL PFPGRVFDIV HCARCRVPWH
501: IEGGKLLLEL NRVLRPGGFF VWSATPVYQK KTEDVEIWKA MSELIKKMCW ELVSINKDTI NGVGVATYRK PTSNECYKNR SEPVPPICAD SDDPNASWKV
601: PLQACMHTAP EDKTQRGSQW PEQWPARLEK APFWLSSSQT GVYGKAAPED FSADYEHWKR VVTKSYLNGL GINWASVRNV MDMRAVYGGF AAALRDLKVW
701: VMNVVPIDSP DTLAIIYERG LFGIYHDWCE SFSTYPRSYD LLHADHLFSK LKQRCNLTAV IAEVDRVLRP EGKLIVRDDA ETIQQVEGMV KAMKWEVRMT
801: YSKEKEGLLS VQKSIWRPSE VETLTYAIG
Arabidopsis Description
Probable methyltransferase PMT26 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7V3]
SUBAcon: [mitochondrion,endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.