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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 5
  • vacuole 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G418500.1 Wheat mitochondrion 96.65 95.71
TraesCS5B01G413400.3 Wheat mitochondrion 96.09 95.29
TraesCS5A01G408700.1 Wheat mitochondrion 93.99 93.99
Os03t0775200-01 Rice mitochondrion 77.65 76.27
Zm00001d034250_P002 Maize mitochondrion 76.96 75.38
GSMUA_Achr6P05660_001 Banana mitochondrion 55.73 57.25
KRH05816 Soybean endoplasmic reticulum 51.96 53.22
KRH15210 Soybean mitochondrion 51.96 52.32
VIT_18s0001g12470.t01 Wine grape mitochondrion 52.51 51.93
CDY67390 Canola mitochondrion 48.74 48.47
CDY26666 Canola mitochondrion 48.46 48.4
Bra025737.1-P Field mustard mitochondrion 48.6 48.33
AT1G19430.1 Thale cress mitochondrion 48.04 47.51
Solyc04g080360.2.1 Tomato nucleus 50.7 46.66
PGSC0003DMT400009562 Potato golgi, mitochondrion 50.42 46.4
EER93372 Sorghum mitochondrion 78.35 42.82
HORVU2Hr1G095070.1 Barley cytosol 22.91 37.88
HORVU5Hr1G102720.2 Barley cytosol 25.14 35.23
HORVU2Hr1G127220.1 Barley cytosol 37.99 35.01
HORVU3Hr1G090970.1 Barley cytosol, golgi, mitochondrion, plastid, vacuole 38.69 34.28
HORVU6Hr1G056160.1 Barley cytosol 21.79 33.62
HORVU1Hr1G070430.8 Barley golgi, plasma membrane, vacuole 30.59 33.38
HORVU7Hr1G100920.3 Barley plastid 26.54 31.77
HORVU1Hr1G057520.1 Barley plastid 26.54 31.46
HORVU2Hr1G095160.7 Barley plastid 26.26 31.39
HORVU6Hr1G065360.4 Barley mitochondrion 28.07 31.16
HORVU0Hr1G021970.3 Barley cytosol, nucleus 34.22 30.51
HORVU3Hr1G089210.3 Barley vacuole 26.12 30.36
HORVU5Hr1G065680.2 Barley cytosol, endoplasmic reticulum, golgi 25.7 29.97
HORVU1Hr1G051470.3 Barley endoplasmic reticulum 25.56 29.95
HORVU3Hr1G088050.14 Barley endoplasmic reticulum, plasma membrane 31.01 29.68
HORVU4Hr1G017470.1 Barley vacuole 36.73 29.48
HORVU3Hr1G085900.1 Barley golgi, plastid 30.31 29.01
HORVU4Hr1G033650.3 Barley endoplasmic reticulum 25.0 28.5
HORVU5Hr1G037320.6 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid 36.59 28.11
HORVU7Hr1G003860.2 Barley plasma membrane 27.51 27.82
HORVU6Hr1G003900.3 Barley cytosol 28.77 27.73
HORVU1Hr1G054470.1 Barley mitochondrion, plastid 23.74 27.24
Protein Annotations
Gene3D:3.40.50.150MapMan:35.1UniProt:A0A287SH14GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005768GO:GO:0005794GO:GO:0005802
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016740GO:GO:0032259EnsemblPlantsGene:HORVU5Hr1G099090
EnsemblPlants:HORVU5Hr1G099090.3PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF733InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTases
SUPFAM:SSF53335UniParc:UPI000B46F9B8SEG:seg:::
Description
No Description!
Coordinates
chrchr5H:-:609408061..609418820
Molecular Weight (calculated)
80284.9 Da
IEP (calculated)
6.847
GRAVY (calculated)
-0.584
Length
716 amino acids
Sequence
(BLAST)
001: MTVFRGPPGR PSALVSWWRR RPPLGFAAKV SIAIALGLSF VITWTTLAPT SSSQQISTER TYFAADVADP PPGAASRNAT ARAVHRKPRP TSPRGRKKRR
101: SPPRSRRPNA TPSPDAAALK SNLTEPDARP EQGPNEPEPE WEWEDEQEPE LSVPEDNADA TGKAPKEEDD KAPALEWADE SSELDGEEED PEAAKSKASK
201: KKKKLPPLFS SAAHYHWKLC SAKSGHHYTP CVDFDGDGSQ KHHERSCPRS PLTCLVSLPK EYKLPAPWPE RKEKVWYGNV GHPRLSSYAK DHNWLNRTGE
301: HLVFPPDESE FKGGARHYID TIDEMAPDLD WGKNIRIALD IGCKSAGFGV ALLEKDVITL SLGLTNDQTD LAQVALERGI PATIGSLGSR RLPFPSGSFD
401: IIHCSECNIP WHSNGGKLLI EMNRILRPGG YFIISSRHGD LESEEGISAS MTAVCWNVIA YNSDDASELG VKIFQRPASN DEYDLRAKKD PPFCKEEQNK
501: ATAWYTPIKH CLHKAPVGIE ERGSEWPEEW PKRLETFPDW LGDLQTRVSA DHSHWKAVVE KSYLDGLGIN WTNIRNVLDM KAVYGGFAAA LSSEKVWVMN
601: VVPVHAPDTL PVIFERGLVG VYHDWCEPFS TYPRSYDLLH ADHLFSRLKN RCKEPVAILV EMDRILRPGG WAIIREKLEI LDPLEAILKS LHWEIVMTFR
701: KDKEGIMSVK KTTWRP
Best Arabidopsis Sequence Match ( AT1G19430.3 )
(BLAST)
001: MMERKREMGI AYFARRIKQP RGIWVKMTFI VVLGLCFVFF WSFLSSSAST FNVQRESFDD IAEPVSSRTK SAHEVSESSK LHERGKVESG SKSKEGKKVG
101: GSSVHKHETK KKKEHAVSHP HKKKDVPKPV VEEVVVKEDQ EHEEAESDDS DQSNKEDGEE GTESDGNEGE SDGNGDGSVD DSSASVDEEV EEKNEEVTVN
201: EISKKRKRKG PVFDPKAEYS WRLCNTRSKH NYMPCIDNDG LIGRLQSYRH RERSCPKKPV MCLVPLPHDG YDPPVSWPES KSKILYKNVA HPKLAAYIKK
301: HNWVNETGEY LSFPQNQTTF NGNVLQYLEF IQEMVPDIEW GKNVRIVLDI GCSDSSFVAA LLDKDVLTVS LGLKDDLVDL AQVALERGFP TFVSSLASRR
401: LPFPSGVFDT IHCAACGVHW HSHGGKLLLE MNRILRPNGY FILSSNNDKI EDDEAMTALT ASICWNILAH KTEEASEMGV RIYQKPESND IYELRRKKNP
501: PLCEDNENPD AAWYVPMKTC IYEIPSAIEQ HGAEWPEEWP KRLETYPEWL TSKEKAMEDT NHWNAMVNKS YLTGLGIDWL HIRNVMDMTA IYGGFGASLV
601: KQNVWVMNVV PVHSPDTLPF IYERGLLGIY HDWCEPFGTY PRSYDLLHAD HLFSRLKNRC KQPASIVVEM DRLTRPGGWV VVRDKVEILE PLEEILRSLH
701: WEIRMTYAQD KEGMLCAQKT LWRP
Arabidopsis Description
Probable methyltransferase PMT28 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN50]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.