Factsheet for TraesCS5D01G418500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G413400.3	Wheat	mitochondrion	96.82	96.95
HORVU5Hr1G099090.3	Barley	mitochondrion	95.71	96.65
TraesCS5A01G408700.1	Wheat	mitochondrion	94.61	95.53
Os03t0775200-01	Rice	mitochondrion	75.66	75.03
Zm00001d034250_P002	Maize	mitochondrion	74.97	74.14
GSMUA_Achr6P05660_001	Banana	mitochondrion	56.15	58.25
KRH05816	Soybean	endoplasmic reticulum	52.01	53.79
KRH15210	Soybean	mitochondrion	51.87	52.74
VIT_18s0001g12470.t01	Wine grape	mitochondrion	52.28	52.21
CDY67390	Canola	mitochondrion	49.1	49.31
CDY26666	Canola	mitochondrion	48.82	49.23
Bra025737.1-P	Field mustard	mitochondrion	48.96	49.17
AT1G19430.1	Thale cress	mitochondrion	48.55	48.48
PGSC0003DMT400009562	Potato	golgi, mitochondrion	51.04	47.43
Solyc04g080360.2.1	Tomato	nucleus	51.04	47.43
EER93372	Sorghum	mitochondrion	76.35	42.14
TraesCS2D01G569900.1	Wheat	plastid	37.07	38.12
TraesCS3D01G401300.2	Wheat	golgi	38.04	34.25
TraesCS2D01G398400.1	Wheat	golgi, mitochondrion, plastid	26.42	32.99
TraesCS1D01G294500.1	Wheat	golgi, plasma membrane, plastid	30.29	32.83
TraesCS6D01G025000.1	Wheat	cytosol	28.35	32.49
TraesCS1D01G216200.1	Wheat	endoplasmic reticulum, golgi	26.14	31.29
TraesCS3D01G342700.1	Wheat	golgi	30.98	31.28
TraesCS6D01G237200.1	Wheat	golgi	27.8	31.26
TraesCS2D01G397900.1	Wheat	mitochondrion	27.39	31.03
TraesCS1D01G153300.1	Wheat	endoplasmic reticulum, golgi	26.42	31.01
TraesCS7D01G433000.1	Wheat	plastid	26.28	31.0
TraesCS3D01G389400.1	Wheat	endoplasmic reticulum	26.0	30.87
TraesCS5D01G429900.1	Wheat	endoplasmic reticulum, golgi, vacuole	26.0	30.72
TraesCS3D01G356400.1	Wheat	endoplasmic reticulum	29.46	30.52
TraesCS1D01G238600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	25.31	30.5
TraesCS1D01G202300.2	Wheat	endoplasmic reticulum	25.59	30.43
TraesCS7D01G027500.1	Wheat	endoplasmic reticulum, golgi	25.86	29.73
TraesCS5D01G234300.1	Wheat	endoplasmic reticulum, golgi	25.03	29.48
TraesCS4D01G150500.1	Wheat	endoplasmic reticulum	24.62	28.8
TraesCS4D01G094600.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole	35.55	28.78
TraesCS7D01G380100.1	Wheat	mitochondrion	34.85	27.6
TraesCS5D01G127100.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	36.51	25.96

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF733
InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS5D01G418500	EnsemblPlants:TraesCS5D01G418500.1	TIGR:cd02440
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:480350941..480354423

Molecular Weight (calculated)

80982.7 Da

IEP (calculated)

6.693

GRAVY (calculated)

-0.585

Length

723 amino acids

Sequence
(BLAST)

001: MTVFRGPPGR PSALVSWWRR RPPLGFAAKV SIAIALGLSF VVTWTTLAPT SSSQQISTER TYFAADVADP PPGALAPPRN ATARAVHRKP RPASPRARKK
101: RRAPPGSRRP NATPSPDAAA LRSNLTDPDA RPEPEQPNKP EPEWEWEDEQ EPELSVPEDD ADATGKAPKE EENDDKAPAL EWADESSELD AEEEEDPEAA
201: KGKASKKKKK KLPPLFSPAA HYHWKLCSAK SGHHYTPCVD FDGDGSQKHH ERSCPRSPVT CLVSLPKEYK LPAPWPERKE KIWYGNVGHP RLSSYAKDHS
301: WLNRTGEHLV FPPEESEFKG GARHYIDTID EMAPDLDWGK NIRIALDIGC KSAGFGVALL EKDVITLSLG LTNDQTDLAQ VALERGIPAT IGSLGSRRLP
401: FPSGSFDIIH CSECNIPWHS NGGKLLIEMN RILRPGGYFI ISSRHGDLES EEGISASMAS VCWNVIAYNS DDVSELGVKI FQRPASNDEY DLRAKKDPPF
501: CKEEQNKATA WYTPIKHCLH KAPAGIEERG SEWPEEWPKR LETFPDWLGD LQTRASADHS HWKAVVEKSY LDGLGINWTN IRNVLDMKAV YGGFAAALSS
601: EKVWVMNVVP VHAPDTLPVI FERGLVGVYH DWCEPFSTYP RSYDLLHADH LFSRLKNRCK EPVAILVEMD RILRPGGWAI IREKLEILDP LEAILKSLHW
701: EIVMTFRKDK EGIMSVKKTT WRP

Best Arabidopsis Sequence Match ( AT1G19430.3 )
(BLAST)

001: MMERKREMGI AYFARRIKQP RGIWVKMTFI VVLGLCFVFF WSFLSSSAST FNVQRESFDD IAEPVSSRTK SAHEVSESSK LHERGKVESG SKSKEGKKVG
101: GSSVHKHETK KKKEHAVSHP HKKKDVPKPV VEEVVVKEDQ EHEEAESDDS DQSNKEDGEE GTESDGNEGE SDGNGDGSVD DSSASVDEEV EEKNEEVTVN
201: EISKKRKRKG PVFDPKAEYS WRLCNTRSKH NYMPCIDNDG LIGRLQSYRH RERSCPKKPV MCLVPLPHDG YDPPVSWPES KSKILYKNVA HPKLAAYIKK
301: HNWVNETGEY LSFPQNQTTF NGNVLQYLEF IQEMVPDIEW GKNVRIVLDI GCSDSSFVAA LLDKDVLTVS LGLKDDLVDL AQVALERGFP TFVSSLASRR
401: LPFPSGVFDT IHCAACGVHW HSHGGKLLLE MNRILRPNGY FILSSNNDKI EDDEAMTALT ASICWNILAH KTEEASEMGV RIYQKPESND IYELRRKKNP
501: PLCEDNENPD AAWYVPMKTC IYEIPSAIEQ HGAEWPEEWP KRLETYPEWL TSKEKAMEDT NHWNAMVNKS YLTGLGIDWL HIRNVMDMTA IYGGFGASLV
601: KQNVWVMNVV PVHSPDTLPF IYERGLLGIY HDWCEPFGTY PRSYDLLHAD HLFSRLKNRC KQPASIVVEM DRLTRPGGWV VVRDKVEILE PLEEILRSLH
701: WEIRMTYAQD KEGMLCAQKT LWRP

Arabidopsis Description

Probable methyltransferase PMT28 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.