Factsheet for TraesCS1D01G216200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G226800.1	Wheat	endoplasmic reticulum, golgi	98.84	98.84
TraesCS1A01G213400.1	Wheat	endoplasmic reticulum, golgi	98.01	98.01
KXG38879	Sorghum	mitochondrion	84.93	84.93
Zm00001d030012_P001	Maize	golgi	84.11	84.11
Os10t0569300-01	Rice	golgi	84.11	83.97
HORVU1Hr1G054470.1	Barley	mitochondrion, plastid	82.45	79.81
VIT_02s0012g00580.t01	Wine grape	endoplasmic reticulum, golgi	70.86	70.05
TraesCS5D01G234300.1	Wheat	endoplasmic reticulum, golgi	70.2	69.06
KRH04297	Soybean	endoplasmic reticulum	69.87	68.84
KRH57576	Soybean	endoplasmic reticulum	69.37	68.35
CDY70748	Canola	cytosol, peroxisome	46.69	65.58
PGSC0003DMT400062230	Potato	endoplasmic reticulum, golgi	66.56	65.26
Solyc08g077240.2.1	Tomato	nucleus	66.39	65.1
AT4G18030.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	66.72	64.9
Bra013282.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	66.39	64.68
CDX78823	Canola	endoplasmic reticulum, golgi, vacuole	66.39	64.68
CDY03207	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	66.23	64.31
TraesCS5D01G429900.1	Wheat	endoplasmic reticulum, golgi, vacuole	64.9	64.05
TraesCS4D01G150500.1	Wheat	endoplasmic reticulum	61.92	60.52
Bra017538.1-P	Field mustard	golgi, plasma membrane	66.06	55.19
CDY35169	Canola	cytosol, endoplasmic reticulum, golgi	66.06	55.03
TraesCS7D01G027500.1	Wheat	endoplasmic reticulum, golgi	56.29	54.05
TraesCS2D01G397900.1	Wheat	mitochondrion	55.79	52.82
TraesCS6D01G237200.1	Wheat	golgi	55.3	51.94
TraesCS6D01G025000.1	Wheat	cytosol	53.81	51.51
TraesCS2D01G398400.1	Wheat	golgi, mitochondrion, plastid	42.22	44.04
TraesCS1D01G202300.2	Wheat	endoplasmic reticulum	42.05	41.78
TraesCS3D01G389400.1	Wheat	endoplasmic reticulum	40.73	40.39
TraesCS7D01G433000.1	Wheat	plastid	38.91	38.34
TraesCS1D01G153300.1	Wheat	endoplasmic reticulum, golgi	37.91	37.18
TraesCS1D01G238600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	34.11	34.33
TraesCS2D01G569900.1	Wheat	plastid	36.76	31.58
TraesCS3D01G356400.1	Wheat	endoplasmic reticulum	35.1	30.37
TraesCS1D01G294500.1	Wheat	golgi, plasma membrane, plastid	33.28	30.13
TraesCS3D01G401300.2	Wheat	golgi	38.91	29.27
TraesCS3D01G342700.1	Wheat	golgi	34.27	28.91
TraesCS5D01G418500.1	Wheat	mitochondrion	31.29	26.14
TraesCS4D01G094600.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole	35.1	23.74
TraesCS7D01G380100.1	Wheat	mitochondrion	34.77	23.0
TraesCS5D01G127100.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	34.93	20.75

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005773	GO:GO:0005774
GO:GO:0005794	GO:GO:0005802	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009505
GO:GO:0016020	GO:GO:0016740	GO:GO:0030312	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF954
InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G216200	EnsemblPlants:TraesCS1D01G216200.1

Description

No Description!

Coordinates

chr1D:-:301947312..301951633

Molecular Weight (calculated)

68996.2 Da

IEP (calculated)

8.405

GRAVY (calculated)

-0.422

Length

604 amino acids

Sequence
(BLAST)

001: MRGSRMNPDR RTRSIMSVVI VMGLCCFFYI LGAWQKSGTG RGDSIALRVT KETDCTILPN LHFETHHSMG GVNPLIMNNK VFKPCHIRYR DYTPCQDQNR
101: AMTFPRENMT YRERHCPAEN EKLHCLIPAP KGYVTPFAWP KSREYVPYAN APYKSLTVEK AIQNWIQHQG DVFHFPGGGT MFPNGASSYI DELASVIPLA
201: DGTIRTALDT GCGVASWGAY LMDRNILTMS FAPRDSHEAQ VQFALERGVP AVIGVLGTMK LPYPSRSFDM AHCSRCLIPW KSNDGMYMME VDRVLRPGGY
301: WILSGPPINW KKYYKTWQRS KQDSEEEQNR IENIAEMLCW NKIYEKEDTV IWQKKANSNA CHNKNGRASK MCNVQDADDI WYKKMETCIT PIPEGAQQLQ
401: KFPQRLFAVP PRILEGTPGV TEEVYEEDKK LWKKHVDTYK RVNKLIGKSR YRNIMDMNAG LGSFAAVLDS PGSWVMNVVP TISERNTLGI IYERGLIGIY
501: HDWCEAFSTY PRTYDLIHAS GVFSLYENKC DLEDILLEMD RILRPEGTVI LRDNVEVLNK VRMTVTGMRW KSKLLDHEDG PLVPEKLLIA VKTYWVGSKE
601: GSGS

Best Arabidopsis Sequence Match ( AT4G18030.1 )
(BLAST)

001: MGSKHNPPGN NRSRSTLSLL VVVGLCCFFY LLGAWQKSGF GKGDSIAMEI TKQAQCTDIV TDLDFEPHHN TVKIPHKADP KPVSFKPCDV KLKDYTPCQE
101: QDRAMKFPRE NMIYRERHCP PDNEKLRCLV PAPKGYMTPF PWPKSRDYVH YANAPFKSLT VEKAGQNWVQ FQGNVFKFPG GGTMFPQGAD AYIEELASVI
201: PIKDGSVRTA LDTGCGVASW GAYMLKRNVL TMSFAPRDNH EAQVQFALER GVPAIIAVLG SILLPYPARA FDMAQCSRCL IPWTANEGTY LMEVDRVLRP
301: GGYWVLSGPP INWKTWHKTW NRTKAELNAE QKRIEGIAES LCWEKKYEKG DIAIFRKKIN DRSCDRSTPV DTCKRKDTDD VWYKEIETCV TPFPKVSNEE
401: EVAGGKLKKF PERLFAVPPS ISKGLINGVD EESYQEDINL WKKRVTGYKR INRLIGSTRY RNVMDMNAGL GGFAAALESP KSWVMNVIPT INKNTLSVVY
501: ERGLIGIYHD WCEGFSTYPR TYDFIHASGV FSLYQHSCKL EDILLETDRI LRPEGIVIFR DEVDVLNDVR KIVDGMRWDT KLMDHEDGPL VPEKILVATK
601: QYWVAGDDGN NSPSSSNSEE E

Arabidopsis Description

Probable methyltransferase PMT14 [Source:UniProtKB/Swiss-Prot;Acc:Q94EJ6]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.