Factsheet for HORVU6Hr1G003900.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G025000.1	Wheat	cytosol	81.29	95.72
TraesCS6B01G029000.1	Wheat	cytosol	81.02	95.4
TraesCS6A01G021300.1	Wheat	cytosol	80.89	95.25
Os10t0510400-01	Rice	golgi, plasma membrane	71.74	84.07
EER93951	Sorghum	peroxisome	69.72	81.32
Zm00001d032476_P001	Maize	cytosol, endoplasmic reticulum, mitochondrion, peroxisome	52.49	80.58
GSMUA_Achr9P19890_001	Banana	cytosol	44.41	73.33
CDX85977	Canola	cytosol	46.57	71.64
CDX93797	Canola	cytosol	46.57	71.64
GSMUA_Achr4P24710_001	Banana	cytosol	48.99	71.23
GSMUA_Achr4P29040_001	Banana	cytosol, golgi, mitochondrion, peroxisome	58.01	71.0
VIT_02s0025g03200.t01	Wine grape	cytosol	57.07	67.09
KRH60099	Soybean	cytosol	55.99	66.77
KRH41379	Soybean	cytosol	56.39	66.61
PGSC0003DMT400014851	Potato	cytosol	55.45	66.03
CDX84046	Canola	cytosol	54.37	66.01
AT1G33170.1	Thale cress	cytosol	56.39	65.57
GSMUA_Achr1P04180_001	Banana	cytosol	53.3	65.45
AT4G10440.1	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, nucleus	55.72	65.4
Solyc08g013740.2.1	Tomato	unclear	55.45	65.29
CDX94256	Canola	cytosol	54.24	65.11
Bra033172.1-P	Field mustard	cytosol	54.24	65.0
CDY25257	Canola	cytosol	54.24	65.0
Bra041005.1-P	Field mustard	cytosol	55.72	64.89
Bra037916.1-P	Field mustard	cytosol	54.51	64.8
CDY44966	Canola	cytosol	53.97	64.68
HORVU2Hr1G095070.1	Barley	cytosol	37.69	64.67
CDX99539	Canola	cytosol	54.24	64.48
CDX99540	Canola	cytosol	46.57	64.43
CDY70936	Canola	cytosol	15.75	63.93
Bra035476.1-P	Field mustard	cytosol	54.91	63.65
HORVU5Hr1G102720.2	Barley	cytosol	39.84	57.93
HORVU7Hr1G003860.2	Barley	plasma membrane	54.64	57.34
HORVU6Hr1G065360.4	Barley	mitochondrion	49.39	56.9
HORVU5Hr1G065680.2	Barley	cytosol, endoplasmic reticulum, golgi	44.15	53.42
HORVU4Hr1G033650.3	Barley	endoplasmic reticulum	40.11	47.45
HORVU1Hr1G054470.1	Barley	mitochondrion, plastid	38.63	45.99
HORVU1Hr1G051470.3	Barley	endoplasmic reticulum	35.53	43.21
HORVU6Hr1G056160.1	Barley	cytosol	26.65	42.67
HORVU3Hr1G089210.3	Barley	vacuole	34.72	41.88
HORVU2Hr1G095160.7	Barley	plastid	32.97	40.9
HORVU7Hr1G100920.3	Barley	plastid	32.71	40.64
HORVU1Hr1G057520.1	Barley	plastid	27.99	34.44
HORVU1Hr1G070430.8	Barley	golgi, plasma membrane, vacuole	28.4	32.16
HORVU3Hr1G085900.1	Barley	golgi, plastid	30.82	30.61
HORVU2Hr1G127220.1	Barley	cytosol	31.76	30.37
HORVU3Hr1G090970.1	Barley	cytosol, golgi, mitochondrion, plastid, vacuole	32.3	29.7
HORVU5Hr1G099090.3	Barley	mitochondrion	27.73	28.77
HORVU3Hr1G088050.14	Barley	endoplasmic reticulum, plasma membrane	28.13	27.94
HORVU0Hr1G021970.3	Barley	cytosol, nucleus	29.21	27.02
HORVU4Hr1G017470.1	Barley	vacuole	30.69	25.56
HORVU5Hr1G037320.6	Barley	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid	29.88	23.82

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	UniProt:A0A287T6K5	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0032259	EnsemblPlantsGene:HORVU6Hr1G003900	EnsemblPlants:HORVU6Hr1G003900.3	PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF990
InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI000B46922D	SEG:seg

Description

No Description!

Coordinates

chrchr6H:+:8535557..8541335

Molecular Weight (calculated)

83750.5 Da

IEP (calculated)

8.312

GRAVY (calculated)

-0.481

Length

743 amino acids

Sequence
(BLAST)

001: MVDQARRQGE TAGATPRGNG IFALVKGPDF GWCLASHHSL HSPECFSGSQ LISGWCSPAR PIRRRSINTR TGRSSGGLTG DGPCRDSAPP SPSSVPARSL
101: LPRWSGFFTT GAMAKDYPAS PKAQHLQESK KQRLTYILVV SALCVAFYVL GAWQNTTMPN PVSDSAISRV DCDPVARRDS SVPSFASASE NVLDFDAHHQ
201: LNLSSTESVL QQFPACPLNQ SEYTPCEDRK RGRLFDRDML IYRERHCPGK DEQIRCLIPA PPKYKNPFRW PESRDFAWFD NIPHKELSIE KAVQNWIRVE
301: GNKFRFPGGG TMFPHGADAY IDEISKLISL SDGRIRTAID TGCGVASFGA YLLKRDIIAM SFAPRDTHEA QVQFALERGV PAILGVMGSL RLPYPSRAFD
401: LAHCSRCLIP WGGHDGLYLA EIDRILRPGG YWIHSGPPIN WRTHHNGWQR TEEDLKREQD KIEDVARSLC WNKVAEKEDL SIWQKPKNHL ECADVKKKYK
501: IPHICKSDNP DAAWYKKMES CLTPLPEVSN QGSIAGGEVA RWPKRAFTVP PRVKRGTIPG IDANKFEEDM KLWEKRLTYY KRTTPIAQGR YRNVMDMNAN
601: LGGFAASLVK YPVWVMNVVP VNSDKDTLGA IYERGFIGTY QDWCEAFSTY PRTYDLLHAD SLFSIYQDRC DITDILLEMD RILRPEGTAI IRDTVDVLTK
701: VQAIGNRMRW DSRILDHEDG PFNPEKVLVA VKTYWTADPS EHS

Best Arabidopsis Sequence Match ( AT4G10440.1 )
(BLAST)

001: MAKENSGHHH QTEARRKKLT LILGVSGLCI LFYVLGAWQA NTVPSSISKL GCETQSNPSS SSSSSSSSES AELDFKSHNQ IELKETNQTI KYFEPCELSL
101: SEYTPCEDRQ RGRRFDRNMM KYRERHCPVK DELLYCLIPP PPNYKIPFKW PQSRDYAWYD NIPHKELSVE KAVQNWIQVE GDRFRFPGGG TMFPRGADAY
201: IDDIARLIPL TDGGIRTAID TGCGVASFGA YLLKRDIMAV SFAPRDTHEA QVQFALERGV PAIIGIMGSR RLPYPARAFD LAHCSRCLIP WFKNDGLYLM
301: EVDRVLRPGG YWILSGPPIN WKQYWRGWER TEEDLKKEQD SIEDVAKSLC WKKVTEKGDL SIWQKPLNHI ECKKLKQNNK SPPICSSDNA DSAWYKDLET
401: CITPLPETNN PDDSAGGALE DWPDRAFAVP PRIIRGTIPE MNAEKFREDN EVWKERIAHY KKIVPELSHG RFRNIMDMNA FLGGFAASML KYPSWVMNVV
501: PVDAEKQTLG VIYERGLIGT YQDWCEGFST YPRTYDMIHA GGLFSLYEHR CDLTLILLEM DRILRPEGTV VLRDNVETLN KVEKIVKGMK WKSQIVDHEK
601: GPFNPEKILV AVKTYWTGQP SDKNNNNNNN NNN

Arabidopsis Description

Probable methyltransferase PMT17 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZX8]
SUBAcon: [mitochondrion,endoplasmic reticulum,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.