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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • nucleus 2
  • plastid 1
  • mitochondrion 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 3
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:nucleus
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:vacuole
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G220000.1 Wheat golgi 94.17 93.96
TraesCS4D01G094600.1 Wheat endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole 93.95 93.84
TraesCS4B01G098500.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole 94.17 93.75
Os11t0186300-01 Rice plasma membrane 68.5 70.47
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 69.96 69.8
Zm00001d004720_P001 Maize golgi 69.51 68.43
CDY43336 Canola cytosol 14.24 66.15
Bra010830.1-P Field mustard golgi 45.18 59.09
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 45.29 58.81
CDX84330 Canola endoplasmic reticulum, plasma membrane 44.96 56.24
CDY31339 Canola plasma membrane 48.09 56.15
CDY39830 Canola plasma membrane 47.87 55.31
KRH53915 Soybean endoplasmic reticulum 49.89 55.21
HORVU2Hr1G127220.1 Barley cytosol 47.98 55.08
KRH64022 Soybean endoplasmic reticulum 49.89 54.94
HORVU3Hr1G090970.1 Barley cytosol, golgi, mitochondrion, plastid, vacuole 49.55 54.7
CDY44314 Canola endoplasmic reticulum 45.52 54.57
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 50.78 54.51
CDX94669 Canola endoplasmic reticulum 45.74 54.47
AT1G29470.1 Thale cress golgi 46.97 54.42
CDX99828 Canola golgi 45.74 54.4
Bra030140.1-P Field mustard endoplasmic reticulum, golgi, mitochondrion, plastid 45.63 54.27
CDY48339 Canola cytosol 45.96 54.23
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 48.54 54.19
Bra032319.1-P Field mustard cytosol 45.74 54.18
Solyc05g056580.2.1 Tomato golgi 48.88 53.63
AT5G64030.1 Thale cress endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 49.78 53.56
AT2G34300.3 Thale cress endoplasmic reticulum, golgi, vacuole 46.19 53.51
PGSC0003DMT400059933 Potato golgi 48.65 53.38
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 45.52 53.28
VIT_04s0044g01670.t01 Wine grape cytosol 49.1 53.09
Bra005438.1-P Field mustard endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 45.29 53.02
KRH40943 Soybean golgi 50.0 52.97
CDY66721 Canola golgi 31.17 52.55
Solyc04g063230.2.1 Tomato cytosol, endoplasmic reticulum, nucleus 44.84 52.08
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 48.77 51.79
HORVU5Hr1G037320.6 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid 53.14 50.86
PGSC0003DMT400006139 Potato nucleus 44.84 50.19
VIT_18s0001g01270.t01 Wine grape plasma membrane 48.09 48.86
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 45.4 48.56
HORVU0Hr1G021970.3 Barley cytosol, nucleus 43.5 48.32
KRH53330 Soybean endoplasmic reticulum 44.96 48.02
Bra024260.1-P Field mustard extracellular, mitochondrion, plasma membrane, vacuole 47.53 45.4
HORVU1Hr1G070430.8 Barley golgi, plasma membrane, vacuole 31.73 43.14
HORVU2Hr1G095070.1 Barley cytosol 19.28 39.72
HORVU6Hr1G056160.1 Barley cytosol 20.07 38.58
HORVU5Hr1G102720.2 Barley cytosol 21.97 38.36
HORVU7Hr1G100920.3 Barley plastid 25.45 37.96
HORVU3Hr1G088050.14 Barley endoplasmic reticulum, plasma membrane 31.61 37.7
HORVU1Hr1G057520.1 Barley plastid 25.45 37.58
HORVU5Hr1G099090.3 Barley mitochondrion 29.48 36.73
HORVU1Hr1G051470.3 Barley endoplasmic reticulum 24.44 35.68
HORVU2Hr1G095160.7 Barley plastid 23.88 35.56
HORVU6Hr1G065360.4 Barley mitochondrion 25.34 35.04
HORVU5Hr1G065680.2 Barley cytosol, endoplasmic reticulum, golgi 24.1 35.02
HORVU3Hr1G085900.1 Barley golgi, plastid 29.15 34.76
HORVU4Hr1G033650.3 Barley endoplasmic reticulum 24.44 34.71
HORVU7Hr1G003860.2 Barley plasma membrane 25.78 32.49
HORVU3Hr1G089210.3 Barley vacuole 22.09 31.98
HORVU1Hr1G054470.1 Barley mitochondrion, plastid 21.52 30.77
HORVU6Hr1G003900.3 Barley cytosol 25.56 30.69
Protein Annotations
Gene3D:3.40.50.150MapMan:35.1EMBL:AK376893UniProt:F2EL65GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0032259EnsemblPlantsGene:HORVU4Hr1G017470EnsemblPlants:HORVU4Hr1G017470.1PFAM:PF03141PANTHER:PTHR10108
PANTHER:PTHR10108:SF1057InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI000200919C
SEG:seg:::::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EL65]
Coordinates
chrchr4H:+:77412148..77415718
Molecular Weight (calculated)
98525.9 Da
IEP (calculated)
5.622
GRAVY (calculated)
-0.533
Length
892 amino acids
Sequence
(BLAST)
001: MALFDRNQRQ RSSLFSTATI VVFAALCLVG FWMVSPPSPE AVPVATVTAS TADVKKAAEA VVKEKEEDRS IDATNNFKQD SANVVAEATT AAVDAEKPAV
101: DVAKGGEADG EKPASKNQSF DDENGRTEGG ELVKPETAET DGAGAAAAAV AASQGKSVED TVTDVKEQAS TDTKETVGSG GQDANAERTP VDTKESIVSP
201: EENPKDASGG GSSKKQTFDD ENGKMEGVDV VKDDGNKTFI SDDSAKPILE ETTTAATDKT EDAAAVGVST EASAATNPDD TKTSDIVEEE QKLLPEALPN
301: GQAELLTERA AQNGSFTTQA AESTNEQKTR DERKKNKKKK KKKAAGKAEA EAAVSSTAHV WKLCNTSTGE DYIPCLDNEA AIKKLKTDIH YEHRERHCPP
401: EPPTCLVPAP PSYKDPIRWP SSRSKIWYHN VPHTQLAEFK KRQNWVKVSG EYLTFPGGGT QFKTGGALHY IDLIQQAFPE VAWGHRSRVV LDVGCGVASF
501: GGFMFERDTL TMSFAPKDEH EAQVQFALER GIPAISAVMG TKRLQFPSNV FDVVHCARCR VPWHIDGGLL LLEVNRLVRP GGFFVWSATP VYQKLPEDVE
601: IWEEMVKLTK AMCWEMVAKT RDTIDRVGLV IFRKPVSNHC YETRRQTEPP LCDPSDDPNA AWNISLRACM HRVPTDPSVR GSRWPQQWPE RAEKVPYWLN
701: SSQVGVYGKA APEDFAADYA HWKKVVQHSY LDGMGIEWKS VRNVMDMRAV YGGLAAALRD MNVWVMNTVN IDSPDTLPVI YERGLFGIYH DWCESFSTYP
801: RSYDLLHADH LFSKLKARCK VLPVLVEVDR ILRPNGKLIV RDDKETVDEI VEGVKSMHWE VRMTVSKRKE AMLCARKTMW RPTEMEPGPP TR
Best Arabidopsis Sequence Match ( AT1G29470.1 )
(BLAST)
001: MAMGKYSRVD GKKSSGYGLT ITIVLIVSLC LVGAWMFMSS WSAPTESIDF SANERTKDVD TTKSDFKSEE VDRGSKSFPD EKNEETEVVT ETNEEKTDPE
101: KSGEENSGEK TESAEERKEF DDKNGDGDRK NGDGEKDTES ESDETKQKEK TQLEESSEEN KSEDSNGTEE NAGESEENTE KKSEENAGET EESTEKSKDV
201: FPAGDQAEIT KESSTGSGAW STQLVESQNE KKAQVSSIKW KVCNVTAGPD YIPCLDNWQA IRKLHSTKHY EHRERHCPEE SPRCLVSLPE GYKRSIKWPK
301: SREKIWYTNI PHTKLAEVKG HQNWVKMSGE YLTFPGGGTQ FKNGALHYID FLQESYPDIA WGNRTRVILD VGCGVASFGG YLFDRDVLAL SFAPKDEHEA
401: QVQFALERGI PAMSNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKTEEDVGIW KAMSKLTKAM CWELMTIKKD
501: ELNEVGAAIY QKPMSNKCYN ERSQNEPPLC KDSDDQNAAW NVPLEACIHK VTEDSSKRGA VWPESWPERV ETVPQWLDSQ EGVYGKPAQE DFTADHERWK
601: TIVSKSYLNG MGIDWSYVRN VMDMRAVYGG FAAALKDLKL WVMNVVPIDS PDTLPIIYER GLFGIYHDWC ESFSTYPRTY DLLHADHLFS SLKKRCNLVG
701: VMAEVDRILR PQGTFIVRDD METIGEIEKM VKSMKWNVRM THSKDGEGLL SVQKSWWRPT EAETIQSAIA
Arabidopsis Description
Probable methyltransferase PMT24 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.