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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 2
  • plastid 1
  • mitochondrion 2
  • extracellular 2
  • golgi 2
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:nucleus
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
 endoplasmic reticulum: 23041469
endoplasmic reticulum: 27224218
mitochondrion: 28499913
msms PMID: 23041469 doi
S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH64022 Soybean endoplasmic reticulum 94.29 93.83
KRH59591 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 76.43 74.13
KRH40943 Soybean golgi 75.81 72.57
Os12t0178300-00 Rice cytosol 22.58 68.68
CDY39830 Canola plasma membrane 65.38 68.26
CDY31339 Canola plasma membrane 64.64 68.19
GSMUA_Achr8P32550_001 Banana cytosol, endoplasmic reticulum, golgi, mitochondrion 56.58 68.16
Solyc05g056580.2.1 Tomato golgi 67.99 67.4
PGSC0003DMT400059933 Potato golgi 67.74 67.16
VIT_04s0044g01670.t01 Wine grape cytosol 67.99 66.42
GSMUA_Achr7P23260_001 Banana cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 60.05 66.3
Zm00001d002943_P002 Maize plasma membrane 54.22 65.13
AT5G64030.1 Thale cress endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 66.5 64.66
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 63.03 63.58
EES11713 Sorghum plastid 55.46 63.31
Os04t0692400-01 Rice mitochondrion, peroxisome 52.98 63.07
EES03991 Sorghum plastid 61.54 62.71
Zm00001d012211_P008 Maize plastid 61.29 62.37
TraesCSU01G022400.1 Wheat plastid 53.97 61.7
TraesCS2D01G569900.1 Wheat plastid 53.72 61.59
GSMUA_Achr8P30140_001 Banana nucleus 60.17 61.55
TraesCS3B01G439800.3 Wheat cytosol, golgi, mitochondrion, plastid, vacuole 61.29 61.52
TraesCS3D01G401300.2 Wheat golgi 61.17 61.39
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 63.65 61.07
TraesCS3A01G406100.1 Wheat plastid 61.17 61.01
HORVU3Hr1G090970.1 Barley cytosol, golgi, mitochondrion, plastid, vacuole 61.17 61.01
Os01t0883900-02 Rice golgi, mitochondrion, plasma membrane, vacuole 60.17 60.17
KRH28732 Soybean endoplasmic reticulum 56.33 59.11
TraesCS2A01G560300.1 Wheat mitochondrion, peroxisome, plastid 53.47 58.24
GSMUA_Achr11P... Banana mitochondrion 59.93 57.98
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 59.18 57.19
KRH53330 Soybean endoplasmic reticulum 59.18 57.13
KRH76730 Soybean endoplasmic reticulum, golgi, plastid 56.33 57.04
HORVU2Hr1G127220.1 Barley cytosol 53.72 55.73
Bra024260.1-P Field mustard extracellular, mitochondrion, plasma membrane, vacuole 63.03 54.39
GSMUA_Achr8P08230_001 Banana cytosol, endoplasmic reticulum, golgi, mitochondrion 58.06 53.36
Os11t0186300-01 Rice plasma membrane 55.71 51.79
KRH69842 Soybean mitochondrion 52.61 51.33
KRH73268 Soybean endoplasmic reticulum 37.72 51.09
KRH14916 Soybean nucleus 37.22 50.42
KRH31179 Soybean plasma membrane 37.1 50.34
HORVU4Hr1G017470.1 Barley vacuole 55.21 49.89
KRG97692 Soybean plastid 23.82 49.74
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 55.09 49.66
TraesCS4D01G094600.1 Wheat endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole 54.96 49.61
TraesCS4B01G098500.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole 54.71 49.22
TraesCS4A01G220000.1 Wheat golgi 54.59 49.22
Zm00001d004720_P001 Maize golgi 55.21 49.12
HORVU5Hr1G037320.6 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid 52.61 45.49
Zm00001d041844_P021 Maize golgi, mitochondrion, nucleus, plasma membrane, plastid 55.71 42.52
KRH05816 Soybean endoplasmic reticulum 36.6 42.2
TraesCS5D01G127100.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 52.85 41.89
KRH15210 Soybean mitochondrion 36.85 41.77
TraesCS5B01G120300.1 Wheat endoplasmic reticulum, golgi, mitochondrion, plasma membrane 52.61 41.61
KXG23110 Sorghum endoplasmic reticulum 55.71 41.27
TraesCS5A01G114100.1 Wheat endoplasmic reticulum 53.1 41.19
KRH00647 Soybean cytosol 27.17 40.63
KRH34393 Soybean endoplasmic reticulum 31.27 40.58
KRH32196 Soybean golgi 29.78 40.54
KRH19571 Soybean golgi 29.65 40.3
KRG95687 Soybean cytosol, golgi, plasma membrane, plastid 31.02 40.06
KRG92410 Soybean endoplasmic reticulum, golgi 30.77 40.0
KRH31698 Soybean endoplasmic reticulum 30.89 39.84
KRH69085 Soybean endoplasmic reticulum, golgi 30.77 39.68
KRG97843 Soybean endoplasmic reticulum 32.51 39.52
KRH31030 Soybean endoplasmic reticulum, plasma membrane 32.75 39.4
KRH15065 Soybean nucleus 32.38 39.31
KRH73069 Soybean endoplasmic reticulum 31.76 38.91
KRH16455 Soybean endoplasmic reticulum, golgi 31.76 38.79
KRH18054 Soybean endoplasmic reticulum, golgi 31.89 38.76
KRH67404 Soybean endoplasmic reticulum, golgi, plasma membrane 30.4 38.52
KRH48238 Soybean endoplasmic reticulum 28.16 38.22
KRH65147 Soybean endoplasmic reticulum 28.16 38.02
KRH76381 Soybean cytosol, golgi, plasma membrane 28.16 38.02
KRH57576 Soybean endoplasmic reticulum 28.91 38.01
KRH04297 Soybean endoplasmic reticulum 28.91 38.01
KRG99086 Soybean endoplasmic reticulum 28.66 37.99
KRH45909 Soybean endoplasmic reticulum 28.54 37.83
KRH39668 Soybean endoplasmic reticulum 27.92 37.69
KRH07708 Soybean cytosol 27.92 37.63
KRH40535 Soybean plastid 27.79 37.52
KRH07206 Soybean cytosol, golgi, plasma membrane 27.79 37.46
KRH01812 Soybean extracellular, plasma membrane, vacuole 26.67 37.39
KRH63351 Soybean endoplasmic reticulum 28.04 37.29
KRH00643 Soybean endoplasmic reticulum, mitochondrion 27.54 37.25
KRH07208 Soybean cytosol 27.79 37.09
KRH74853 Soybean endoplasmic reticulum, golgi 27.92 37.07
KRH70718 Soybean endoplasmic reticulum 27.92 37.07
KRG91450 Soybean mitochondrion 27.54 37.0
KRH72067 Soybean plastid 27.54 36.82
KRH60099 Soybean cytosol 28.41 36.76
KRH41379 Soybean cytosol 28.54 36.57
KRH09116 Soybean endoplasmic reticulum 28.54 36.39
KRH33118 Soybean extracellular, golgi, plastid 27.17 36.14
KRH54546 Soybean golgi 25.81 35.99
KRH38569 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 28.16 35.86
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 27.42 35.53
KRH46879 Soybean endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid 26.67 34.13
KRH48242 Soybean endoplasmic reticulum 27.05 34.01
Protein Annotations
EntrezGene:100816312Gene3D:3.40.50.150MapMan:35.1EMBL:ACUP02003489EnsemblPlantsGene:GLYMA_06G154800GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259UniProt:I1KBK8EnsemblPlants:KRH53915ProteinID:KRH53915ProteinID:KRH53915.1ProteinID:KRH53916.1
PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF1060InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesSUPFAM:SSF53335
TMHMM:TMhelixUniParc:UPI000233A45DSEG:seg:::
Description
hypothetical protein
Coordinates
chr6:+:12624362..12630133
Molecular Weight (calculated)
91051.2 Da
IEP (calculated)
4.890
GRAVY (calculated)
-0.744
Length
806 amino acids
Sequence
(BLAST)
001: MALGKYARVD GRRSSSWCST VTVVVFVALC LVGVWMMTSS SVVPVRNGDE AQENKNQVKE QTEPTEVKEA VSEVSNSNMR QFEDNPGDLP EDATKGDSNV
101: ASEDNSNLSD KQEEKSEENP VERSSDDTKS EDVEDKKTEE EGSNTENESN SDSTENSKDS DETSTKESDS DENEKKSDSD ESEKQSNDTD ETTDTKIEEK
201: VEESDNKESD ENSSEKNIND DTKQKSSKEV YPSGAQSELQ EESTAETGSW STQAAQSKNE KDSQESSKQP TGYKWKLCNV TAGPDFIPCL DNWKAIRSLQ
301: STKHYEHRER HCPEEPPTCL VPVPEGYKRP IEWPKSREKI WYYNVPHTKL AEVKGHQNWV KVTGEYLTFP GGGTQFKHGA LHYIDFIQET VPDIAWGKRT
401: RVILDVGCGV ASFGGFLFDR DVLAMSLAPK DEHEAQVQFA LERGIPAISA VMGTKRLPFP GKVFDVVHCA RCRVPWHIEG GKLLLELNRV LRPGGFFVWS
501: ATPIYQKLPE DVEIWKAMKA LTKAMCWEVV SISKDPVNGV GVAVYRKPTS NECYEQRSKN EPPLCPDSDD PNAAWNIQLQ ACLHKAPVSS KERGSKLPEL
601: WPARLIKVPY WLSSSQVGVY GKPAPQDFTA DYEHWKRVVS KSYLDGMGIK WSNVRNVMDM RSIYGGFAAA LRDLNVWVMN VVTIDSPDTL PIIYERGLFG
701: IYHDWCESFS TYPRTYDLLH ADHLFSKLKK RCNLAAVVAE ADRILRPEGK LIVRDTVEII EELESMARSM QWKVRMTYSK DKEGLLCVEK SKWRPKEQEK
801: LEYAIA
Best Arabidopsis Sequence Match ( AT1G29470.2 )
(BLAST)
001: MAMGKYSRVD GKKSSGYGLT ITIVLIVSLC LVGAWMFMSS WSAPTESIDF SANERTKDVD TTKSDFKSEE VDRGSKSFPD EKNEETEVVT ETNEEKTDPE
101: KSGEENSGEK TESAEERKEF DDKNGDGDRK NGDGEKDTES ESDETKQKEK TQLEESSEEN KSEDSNGTEE NAGESEENTE KKSEENAGET EESTEKSKDV
201: FPAGDQAEIT KESSTGSGAW STQLVESQNE KKAQVSSIKW KVCNVTAGPD YIPCLDNWQA IRKLHSTKHY EHRERHCPEE SPRCLVSLPE GYKRSIKWPK
301: SREKIWYTNI PHTKLAEVKG HQNWVKMSGE YLTFPGGGTQ FKNGALHYID FLQESYPDIA WGNRTRVILD VGCGVASFGG YLFDRDVLAL SFAPKDEHEA
401: QVQFALERGI PAMSNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKTEEDVGIW KAMSKLTKAM CWELMTIKKD
501: ELNEVGAAIY QKPMSNKCYN ERSQNEPPLC KDSDDQNAAW NVPLEACIHK VTEDSSKRGA VWPESWPERV ETVPQWLDSQ EGVYGKPAQE DFTADHERWK
601: TIVSKSYLNG MGIDWSYVRN VMDMRAVYGG FAAALKDLKL WVMNVVPIDS PDTLPIIYER GLFGIYHDWC ESFSTYPRTY DLLHADHLFS SLKKRCNLVG
701: VMAEVDRILR PQGTFIVRDD METIGEIEKM VKSMKWNVRM THSKDGEGLL SVQKSWWRPT EAETIQSAIA
Arabidopsis Description
Probable methyltransferase PMT24 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPR7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.