Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 3
- golgi 4
- plasma membrane 3
- vacuole 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
endoplasmic reticulum:
23041469
endoplasmic reticulum: 27224218 endoplasmic reticulum: 28499913 mitochondrion: 28499913 |
msms PMID:
23041469
doi
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45909 | Soybean | endoplasmic reticulum | 97.04 | 97.04 |
| KRH74853 | Soybean | endoplasmic reticulum, golgi | 87.34 | 87.48 |
| KRH70718 | Soybean | endoplasmic reticulum | 86.84 | 86.99 |
| CDY50730 | Canola | cytosol | 65.62 | 80.44 |
| CDY46435 | Canola | endoplasmic reticulum, golgi | 78.62 | 79.27 |
| CDY16198 | Canola | endoplasmic reticulum, golgi | 78.78 | 79.04 |
| CDY40268 | Canola | endoplasmic reticulum, golgi | 78.45 | 78.71 |
| Bra016293.1-P | Field mustard | endoplasmic reticulum, golgi | 78.95 | 78.56 |
| Bra024678.1-P | Field mustard | endoplasmic reticulum, golgi | 79.28 | 78.5 |
| PGSC0003DMT400016774 | Potato | endoplasmic reticulum, golgi | 78.95 | 78.43 |
| AT1G26850.2 | Thale cress | endoplasmic reticulum, golgi | 79.44 | 78.41 |
| CDY45006 | Canola | endoplasmic reticulum, golgi | 77.96 | 78.35 |
| Bra012437.1-P | Field mustard | endoplasmic reticulum, golgi | 78.78 | 78.01 |
| VIT_01s0026g02340.t01 | Wine grape | golgi | 81.41 | 77.83 |
| PGSC0003DMT400080300 | Potato | endoplasmic reticulum, golgi | 78.29 | 77.78 |
| GSMUA_Achr3P01520_001 | Banana | endoplasmic reticulum, golgi | 75.16 | 77.46 |
| Solyc05g007490.2.1 | Tomato | nucleus, plastid, unclear | 77.96 | 77.45 |
| Solyc01g010870.2.1 | Tomato | nucleus, unclear | 77.3 | 77.43 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 78.29 | 77.15 |
| GSMUA_Achr3P20050_001 | Banana | endoplasmic reticulum, golgi | 73.36 | 75.59 |
| TraesCS5D01G234300.1 | Wheat | endoplasmic reticulum, golgi | 76.15 | 75.41 |
| TraesCS5B01G225500.1 | Wheat | cytosol, endoplasmic reticulum, golgi | 75.99 | 75.24 |
| TraesCS5A01G226900.1 | Wheat | golgi | 75.82 | 75.08 |
| HORVU5Hr1G065680.2 | Barley | cytosol, endoplasmic reticulum, golgi | 75.49 | 74.76 |
| GSMUA_Achr8P16940_001 | Banana | endoplasmic reticulum, golgi | 43.75 | 74.51 |
| Os09t0415700-01 | Rice | golgi | 75.16 | 74.19 |
| EER96732 | Sorghum | endoplasmic reticulum, golgi | 75.16 | 73.95 |
| Zm00001d020461_P001 | Maize | plasma membrane | 74.67 | 73.82 |
| HORVU5Hr1G102720.2 | Barley | cytosol | 61.68 | 73.39 |
| KRH63351 | Soybean | endoplasmic reticulum | 71.38 | 71.62 |
| KRH57576 | Soybean | endoplasmic reticulum | 70.56 | 69.98 |
| TraesCS5D01G429900.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 70.23 | 69.77 |
| KRH04297 | Soybean | endoplasmic reticulum | 70.23 | 69.66 |
| KRH54546 | Soybean | golgi | 66.12 | 69.55 |
| Os03t0379100-01 | Rice | endoplasmic reticulum, golgi, vacuole | 69.24 | 68.9 |
| TraesCS5A01G421600.2 | Wheat | endoplasmic reticulum | 70.07 | 68.6 |
| TraesCS5B01G423200.2 | Wheat | cytosol, endoplasmic reticulum, golgi, mitochondrion | 70.07 | 68.6 |
| EER94782 | Sorghum | endoplasmic reticulum, golgi, vacuole | 68.09 | 67.87 |
| Zm00001d029336_P002 | Maize | cytosol | 68.42 | 60.55 |
| KRH00647 | Soybean | cytosol | 51.97 | 58.63 |
| Zm00001d047183_P002 | Maize | golgi | 58.55 | 57.05 |
| KRG91450 | Soybean | mitochondrion | 53.62 | 54.33 |
| KRH09116 | Soybean | endoplasmic reticulum | 55.92 | 53.8 |
| KRH60099 | Soybean | cytosol | 54.77 | 53.45 |
| KRH38569 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 55.43 | 53.24 |
| KRH40534 | Soybean | endoplasmic reticulum, mitochondrion, vacuole | 53.95 | 52.73 |
| KRH41379 | Soybean | cytosol | 54.44 | 52.62 |
| KRH48242 | Soybean | endoplasmic reticulum | 52.63 | 49.92 |
| KRH01812 | Soybean | extracellular, plasma membrane, vacuole | 46.05 | 48.7 |
| KRH46879 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 45.89 | 44.29 |
| KRH39668 | Soybean | endoplasmic reticulum | 41.94 | 42.71 |
| KRH07206 | Soybean | cytosol, golgi, plasma membrane | 41.78 | 42.47 |
| KRH76381 | Soybean | cytosol, golgi, plasma membrane | 41.61 | 42.38 |
| KRH07208 | Soybean | cytosol | 41.45 | 41.72 |
| KRH40535 | Soybean | plastid | 40.95 | 41.71 |
| KRH07708 | Soybean | cytosol | 40.95 | 41.64 |
| KRH00643 | Soybean | endoplasmic reticulum, mitochondrion | 40.46 | 41.28 |
| KRH48238 | Soybean | endoplasmic reticulum | 40.3 | 41.25 |
| KRH65147 | Soybean | endoplasmic reticulum | 40.3 | 41.04 |
| KRH19571 | Soybean | golgi | 37.66 | 38.62 |
| KRH32196 | Soybean | golgi | 37.34 | 38.34 |
| KRH69085 | Soybean | endoplasmic reticulum, golgi | 38.82 | 37.76 |
| KRG95687 | Soybean | cytosol, golgi, plasma membrane, plastid | 38.49 | 37.5 |
| KRH31698 | Soybean | endoplasmic reticulum | 38.49 | 37.44 |
| KRH34393 | Soybean | endoplasmic reticulum | 38.16 | 37.36 |
| KRG92410 | Soybean | endoplasmic reticulum, golgi | 37.99 | 37.26 |
| KRH67404 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 37.66 | 36.01 |
| KRG97843 | Soybean | endoplasmic reticulum | 38.98 | 35.75 |
| KRH16455 | Soybean | endoplasmic reticulum, golgi | 38.65 | 35.61 |
| KRH18054 | Soybean | endoplasmic reticulum, golgi | 38.82 | 35.6 |
| KRG97692 | Soybean | plastid | 22.53 | 35.49 |
| KRH73268 | Soybean | endoplasmic reticulum | 34.54 | 35.29 |
| KRH31030 | Soybean | endoplasmic reticulum, plasma membrane | 38.65 | 35.07 |
| KRH73069 | Soybean | endoplasmic reticulum | 37.83 | 34.95 |
| KRH14916 | Soybean | nucleus | 34.05 | 34.79 |
| KRH15065 | Soybean | nucleus | 37.66 | 34.49 |
| KRH31179 | Soybean | plasma membrane | 33.55 | 34.34 |
| KRH72067 | Soybean | plastid | 32.73 | 33.0 |
| KRH33118 | Soybean | extracellular, golgi, plastid | 32.24 | 32.34 |
| KRH53915 | Soybean | endoplasmic reticulum | 37.99 | 28.66 |
| KRH64022 | Soybean | endoplasmic reticulum | 37.99 | 28.52 |
| KRH28732 | Soybean | endoplasmic reticulum | 35.86 | 28.39 |
| KRH69842 | Soybean | mitochondrion | 37.99 | 27.97 |
| KRH59591 | Soybean | golgi, mitochondrion, plasma membrane, plastid, vacuole | 37.99 | 27.8 |
| KRH76730 | Soybean | endoplasmic reticulum, golgi, plastid | 35.86 | 27.39 |
| KRH40943 | Soybean | golgi | 37.66 | 27.2 |
| KRH53330 | Soybean | endoplasmic reticulum | 37.17 | 27.07 |
| KRH64591 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 36.84 | 26.86 |
| KRH05816 | Soybean | endoplasmic reticulum | 29.93 | 26.04 |
| KRH15210 | Soybean | mitochondrion | 29.77 | 25.46 |
Protein Annotations
| EntrezGene:100792999 | Gene3D:3.40.50.150 | MapMan:35.1 | EMBL:ACUP02010960 | ncoils:Coil | EnsemblPlantsGene:GLYMA_18G119600 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008757 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0032259 | UniProt:K7MRH9 | ProteinID:KRG99084.1 | ProteinID:KRG99085.1 | EnsemblPlants:KRG99086 |
| ProteinID:KRG99086 | ProteinID:KRG99086.1 | PFAM:PF03141 | PANTHER:PTHR10108 | PANTHER:PTHR10108:SF1061 | InterPro:Put_SAM_MeTrfase |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | TMHMM:TMhelix | UniParc:UPI000233E6DE | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr18:+:14861975..14867035
Molecular Weight (calculated)
68770.2 Da
IEP (calculated)
7.879
GRAVY (calculated)
-0.401
Length
608 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKPSSADGR TRSSVQIFIV VGLCCFFYIL GAWQRSGFGK GDSIALEITK TKAECNIVPN LSFDSHHGGE VSEIDEADSK PKVFEPCAAR YTDYTPCQDQ
101: KRAMTFPREN MVYRERHCPP EEEKLRCMIP APKGYVTPFP WPKSRDYVPY ANAPYKSLTV EKAIQNWIQY EGNVFKFPGG GTQFPQGADK YIDQIASVIP
201: ITNGTVRTAL DTGCGVASWG AYLWSRNVVA MSFAPRDNHE AQVQFALERG VPAIIGVLGS IKLPYPSRAF DMAHCSRCLI PWGANNGIYM MEVDRVLRPG
301: GYWVLSGPPI NWKANYKSWL RPKEELEEEQ RKIEEIAKQL CWEKRSEKAE MAIWQKVVDS ESCRRRQDDS SVEFCQSSDA DDVWYKKMET CITPTPKVTG
401: GNLKPFPSRL YAIPPRIASG SVPGVSSETY QDDNKKWKKH VNAYKKTNRL LDSGRYRNIM DMNSGLGSFA AAIHSSNLWV MNVVPTIAEM NTLGVIYERG
501: LIGIYHDWCE AFSTYPRTYD LIHAHGVFSL YKDKCNAEDI LLEMDRILRP EGAVIFRDEV DVLIKVKKIV GGMRWDTKMV DHEDGPLVPE KVLVAVKQYW
601: VTNSTSTQ
101: KRAMTFPREN MVYRERHCPP EEEKLRCMIP APKGYVTPFP WPKSRDYVPY ANAPYKSLTV EKAIQNWIQY EGNVFKFPGG GTQFPQGADK YIDQIASVIP
201: ITNGTVRTAL DTGCGVASWG AYLWSRNVVA MSFAPRDNHE AQVQFALERG VPAIIGVLGS IKLPYPSRAF DMAHCSRCLI PWGANNGIYM MEVDRVLRPG
301: GYWVLSGPPI NWKANYKSWL RPKEELEEEQ RKIEEIAKQL CWEKRSEKAE MAIWQKVVDS ESCRRRQDDS SVEFCQSSDA DDVWYKKMET CITPTPKVTG
401: GNLKPFPSRL YAIPPRIASG SVPGVSSETY QDDNKKWKKH VNAYKKTNRL LDSGRYRNIM DMNSGLGSFA AAIHSSNLWV MNVVPTIAEM NTLGVIYERG
501: LIGIYHDWCE AFSTYPRTYD LIHAHGVFSL YKDKCNAEDI LLEMDRILRP EGAVIFRDEV DVLIKVKKIV GGMRWDTKMV DHEDGPLVPE KVLVAVKQYW
601: VTNSTSTQ
001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
Arabidopsis Description
Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [golgi,endoplasmic reticulum]
SUBAcon: [golgi,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.