Subcellular Localization
min:
: max
Winner_takes_all: unclear, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
unclear:
26455813
nucleus: 28394025 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400016774 | Potato | endoplasmic reticulum, golgi | 95.88 | 95.1 |
| Solyc05g007490.2.1 | Tomato | nucleus, plastid, unclear | 86.0 | 85.29 |
| CDY50730 | Canola | cytosol | 65.9 | 80.65 |
| KRH70718 | Soybean | endoplasmic reticulum | 77.59 | 77.59 |
| KRH74853 | Soybean | endoplasmic reticulum, golgi | 77.43 | 77.43 |
| KRG99086 | Soybean | endoplasmic reticulum | 77.43 | 77.3 |
| KRH45909 | Soybean | endoplasmic reticulum | 76.94 | 76.81 |
| CDY16198 | Canola | endoplasmic reticulum, golgi | 76.44 | 76.57 |
| CDY46435 | Canola | endoplasmic reticulum, golgi | 75.95 | 76.45 |
| CDY45006 | Canola | endoplasmic reticulum, golgi | 76.11 | 76.36 |
| CDY40268 | Canola | endoplasmic reticulum, golgi | 75.95 | 76.07 |
| AT1G26850.2 | Thale cress | endoplasmic reticulum, golgi | 77.1 | 75.97 |
| Bra024678.1-P | Field mustard | endoplasmic reticulum, golgi | 76.61 | 75.73 |
| Bra016293.1-P | Field mustard | endoplasmic reticulum, golgi | 75.95 | 75.45 |
| Bra012437.1-P | Field mustard | endoplasmic reticulum, golgi | 76.28 | 75.41 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 75.29 | 74.07 |
| GSMUA_Achr3P01520_001 | Banana | endoplasmic reticulum, golgi | 71.99 | 74.07 |
| TraesCS5D01G234300.1 | Wheat | endoplasmic reticulum, golgi | 74.79 | 73.94 |
| TraesCS5B01G225500.1 | Wheat | cytosol, endoplasmic reticulum, golgi | 74.63 | 73.78 |
| VIT_01s0026g02340.t01 | Wine grape | golgi | 77.27 | 73.74 |
| HORVU5Hr1G065680.2 | Barley | cytosol, endoplasmic reticulum, golgi | 74.46 | 73.62 |
| TraesCS5A01G226900.1 | Wheat | golgi | 74.3 | 73.45 |
| GSMUA_Achr8P16940_001 | Banana | endoplasmic reticulum, golgi | 42.5 | 72.27 |
| Zm00001d020461_P001 | Maize | plasma membrane | 73.15 | 72.2 |
| EER96732 | Sorghum | endoplasmic reticulum, golgi | 73.48 | 72.17 |
| GSMUA_Achr3P20050_001 | Banana | endoplasmic reticulum, golgi | 70.02 | 72.03 |
| Solyc06g069870.2.1 | Tomato | endoplasmic reticulum | 72.98 | 72.03 |
| HORVU5Hr1G102720.2 | Barley | cytosol | 60.3 | 71.62 |
| Os09t0415700-01 | Rice | golgi | 72.32 | 71.27 |
| Solyc03g116150.2.1 | Tomato | nucleus | 68.37 | 71.06 |
| Os03t0379100-01 | Rice | endoplasmic reticulum, golgi, vacuole | 68.53 | 68.09 |
| TraesCS5D01G429900.1 | Wheat | endoplasmic reticulum, golgi, vacuole | 68.37 | 67.81 |
| EER94782 | Sorghum | endoplasmic reticulum, golgi, vacuole | 67.22 | 66.89 |
| TraesCS5B01G423200.2 | Wheat | cytosol, endoplasmic reticulum, golgi, mitochondrion | 68.37 | 66.83 |
| TraesCS5A01G421600.2 | Wheat | endoplasmic reticulum | 68.37 | 66.83 |
| Solyc08g077240.2.1 | Tomato | nucleus | 67.55 | 66.56 |
| Zm00001d029336_P002 | Maize | cytosol | 67.87 | 59.97 |
| Zm00001d047183_P002 | Maize | golgi | 58.81 | 57.21 |
| Solyc08g013740.2.1 | Tomato | unclear | 53.54 | 51.51 |
| Solyc06g035790.2.1 | Tomato | plastid | 54.7 | 51.0 |
| Solyc03g026120.2.1 | Tomato | plastid | 53.71 | 50.15 |
| Solyc01g009600.2.1 | Tomato | plastid | 51.07 | 48.9 |
| Solyc01g091690.2.1 | Tomato | plastid | 49.92 | 47.64 |
| Solyc01g091640.2.1 | Tomato | nucleus | 41.52 | 42.07 |
| Solyc08g005490.2.1 | Tomato | nucleus, unclear | 40.2 | 40.87 |
| Solyc08g075870.2.1 | Tomato | nucleus, unclear | 39.7 | 40.37 |
| Solyc02g067890.2.1 | Tomato | nucleus | 38.22 | 38.03 |
| Solyc09g090190.2.1 | Tomato | nucleus | 38.72 | 38.03 |
| Solyc03g005600.2.1 | Tomato | nucleus, unclear | 38.55 | 37.74 |
| Solyc05g052970.2.1 | Tomato | endoplasmic reticulum | 37.56 | 33.63 |
| Solyc10g079450.1.1 | Tomato | plasma membrane | 33.61 | 33.39 |
| Solyc04g058180.2.1 | Tomato | plastid | 34.27 | 32.2 |
| Solyc06g051000.2.1 | Tomato | plastid | 33.94 | 32.09 |
| Solyc04g063230.2.1 | Tomato | cytosol, endoplasmic reticulum, nucleus | 36.24 | 28.65 |
| Solyc05g056580.2.1 | Tomato | golgi | 36.57 | 27.31 |
| Solyc05g052500.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 34.93 | 27.18 |
| Solyc02g084670.2.1 | Tomato | unclear | 36.41 | 25.03 |
| Solyc04g080360.2.1 | Tomato | nucleus | 30.15 | 23.52 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008757 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0032259 | UniProt:K4ATT0 | PFAM:PF03141 |
| PANTHER:PTHR10108 | PANTHER:PTHR10108:SF1061 | InterPro:Put_SAM_MeTrfase | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | EnsemblPlantsGene:Solyc01g010870.2 |
| EnsemblPlants:Solyc01g010870.2.1 | TMHMM:TMhelix | UniParc:UPI0002761ED1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1:-:6308707..6315760
Molecular Weight (calculated)
68558.4 Da
IEP (calculated)
8.445
GRAVY (calculated)
-0.406
Length
607 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDNRTRTSV SIFIVAGLCF FFYLLGSWQR SGVGKGDSIA LAVTRSGENC NILPNLNFET RHGGQAGSID DSGTEVKKFK PCRPRYTDHT PCQDQKRAMH
101: LPRENMIYRE RHCPPPEKKL NCLIPAPKGY VAPFPWPKSR DYVPYVNAPY KSLTVEKAIQ NWIQYEGNVF RFPGGGTQFP QGADKYIDQL ASVIPIQNGT
201: VRTALDTGCG VASWGAYLWK RNVIAMSFAP RDSHEAQVQF ALERGVPAVI GVLGTVKMPY PSRAFDMAHC SRCLIPWGAA DGILMMEVDR VLRPGGYWVL
301: SGPPINWKTN YKAWQRPMED LQEEQRKIEE IAKLLCWEKK SEKGETAIWQ KRMDADSCRS TQEESEATLC KSTDPDDVWY NKMEACITPS KGNGDDEGLK
401: PFPERLFAVP PRIANGLVSG VPVEAYLEDN RKWKKHVSAY KKINKLIDTG RYRNIMDMNS GLGGFAAALQ SPKLWVMNVM PTIAKKNTLG VIYERGLIGI
501: YHDWCEAFST YPRTYDLIHA HGLFSLYKDK CNFEDILLEM DRILRPEGAV ILRDDIDVLI KVKKIIGGIR WDSKLIDHED GPLVPEKILV AVKQYWTVGD
601: DNSTSTR
101: LPRENMIYRE RHCPPPEKKL NCLIPAPKGY VAPFPWPKSR DYVPYVNAPY KSLTVEKAIQ NWIQYEGNVF RFPGGGTQFP QGADKYIDQL ASVIPIQNGT
201: VRTALDTGCG VASWGAYLWK RNVIAMSFAP RDSHEAQVQF ALERGVPAVI GVLGTVKMPY PSRAFDMAHC SRCLIPWGAA DGILMMEVDR VLRPGGYWVL
301: SGPPINWKTN YKAWQRPMED LQEEQRKIEE IAKLLCWEKK SEKGETAIWQ KRMDADSCRS TQEESEATLC KSTDPDDVWY NKMEACITPS KGNGDDEGLK
401: PFPERLFAVP PRIANGLVSG VPVEAYLEDN RKWKKHVSAY KKINKLIDTG RYRNIMDMNS GLGGFAAALQ SPKLWVMNVM PTIAKKNTLG VIYERGLIGI
501: YHDWCEAFST YPRTYDLIHA HGLFSLYKDK CNFEDILLEM DRILRPEGAV ILRDDIDVLI KVKKIIGGIR WDSKLIDHED GPLVPEKILV AVKQYWTVGD
601: DNSTSTR
001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
Arabidopsis Description
Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.