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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
 golgi: 25047511
msms PMID: 25047511 doi
Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han
Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER96732 Sorghum endoplasmic reticulum, golgi 91.56 91.26
TraesCS5B01G225500.1 Wheat cytosol, endoplasmic reticulum, golgi 90.75 91.04
TraesCS5D01G234300.1 Wheat endoplasmic reticulum, golgi 90.75 91.04
TraesCS5A01G226900.1 Wheat golgi 90.58 90.88
HORVU5Hr1G065680.2 Barley cytosol, endoplasmic reticulum, golgi 89.94 90.23
Zm00001d020461_P001 Maize plasma membrane 89.94 90.08
GSMUA_Achr3P20050_001 Banana endoplasmic reticulum, golgi 73.38 76.61
KRH70718 Soybean endoplasmic reticulum 75.16 76.28
KRH74853 Soybean endoplasmic reticulum, golgi 74.68 75.78
CDY50730 Canola cytosol 60.55 75.2
KRG99086 Soybean endoplasmic reticulum 74.19 75.16
KRH45909 Soybean endoplasmic reticulum 74.03 75.0
PGSC0003DMT400080300 Potato endoplasmic reticulum, golgi 72.89 73.37
VIT_17s0000g06050.t01 Wine grape cytosol 72.4 73.11
CDY46435 Canola endoplasmic reticulum, golgi 71.27 72.8
AT1G26850.2 Thale cress endoplasmic reticulum, golgi 72.73 72.73
Solyc05g007490.2.1 Tomato nucleus, plastid, unclear 72.24 72.71
CDY16198 Canola endoplasmic reticulum, golgi 71.43 72.61
PGSC0003DMT400016774 Potato endoplasmic reticulum, golgi 72.08 72.55
Bra024678.1-P Field mustard endoplasmic reticulum, golgi 72.24 72.48
Bra016293.1-P Field mustard endoplasmic reticulum, golgi 71.75 72.34
Solyc01g010870.2.1 Tomato nucleus, unclear 71.27 72.32
CDY45006 Canola endoplasmic reticulum, golgi 70.94 72.23
CDY40268 Canola endoplasmic reticulum, golgi 70.94 72.11
Bra012437.1-P Field mustard endoplasmic reticulum, golgi 71.59 71.82
Solyc06g069870.2.1 Tomato endoplasmic reticulum 71.43 71.54
VIT_01s0026g02340.t01 Wine grape golgi 72.73 70.44
Solyc03g116150.2.1 Tomato nucleus 65.91 69.52
PGSC0003DMT400050242 Potato golgi 69.48 69.48
Os03t0379100-01 Rice endoplasmic reticulum, golgi, vacuole 68.18 68.74
Os10t0569300-01 Rice golgi 67.37 68.59
KRH63351 Soybean endoplasmic reticulum 67.21 68.32
KRH54546 Soybean golgi 63.15 67.3
Os11t0601600-01 Rice golgi 63.64 60.12
Os02t0675700-01 Rice mitochondrion 57.31 54.64
Os04t0570800-02 Rice golgi 55.52 52.94
Os06t0103900-01 Rice cytosol, golgi, mitochondrion, plastid 53.41 52.14
Os10t0510400-01 Rice golgi, plasma membrane 53.57 52.05
Os06t0128100-01 Rice endoplasmic reticulum 51.79 51.62
Os04t0218400-00 Rice cytosol 11.53 48.63
Os04t0569400-00 Rice golgi, mitochondrion 39.12 41.13
Os06t0687450-01 Rice endoplasmic reticulum, golgi 36.85 37.77
Os10t0477100-01 Rice golgi 37.01 36.95
Os05t0378800-02 Rice golgi 36.04 36.57
Os01t0846600-01 Rice mitochondrion 39.12 35.08
Os12t0178300-00 Rice cytosol 14.94 34.72
Os04t0692400-01 Rice mitochondrion, peroxisome 36.53 33.23
Os05t0472200-01 Rice endoplasmic reticulum, golgi 34.09 32.26
Os01t0828300-01 Rice golgi, plastid 34.09 31.16
Os06t0712800-01 Rice cytosol 21.92 30.2
Os01t0883900-02 Rice golgi, mitochondrion, plasma membrane, vacuole 38.47 29.4
Os11t0186300-01 Rice plasma membrane 35.06 24.91
Os03t0775200-01 Rice mitochondrion 28.08 23.73
Protein Annotations
Gene3D:3.40.50.150MapMan:35.1EntrezGene:4347059ProteinID:BAD28913.1ProteinID:BAD29253.1ProteinID:BAF25088.1
ProteinID:BAT08081.1ncoils:CoilProteinID:EAZ44732.1GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0008757GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0032259EnsemblPlantsGene:Os09g0415700
EnsemblPlants:Os09t0415700-01PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF1061InterPro:Put_SAM_MeTrfaseUniProt:Q6EQ17
InterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI00003CE83ERefSeq:XP_015612069.1RefSeq:XP_015612070.1
Description
Protein of unknown function DUF248, methyltransferase putative family protein. (Os09t0415700-01)
Coordinates
chr9:+:14867389..14870846
Molecular Weight (calculated)
69167.6 Da
IEP (calculated)
9.152
GRAVY (calculated)
-0.317
Length
616 amino acids
Sequence
(BLAST)
001: MAVKASSADN RTRSTVSLCI VIGMCCFFYI LGAWQKSGFG KGDSIALEIT KRTDCTILPN LSFDTHLAKQ ARPRDLVSPA KKFKPCPDRY TDYTPCQDQN
101: RAMKFPRENM NYRERHCPPQ KEKLHCLIPP PKGYVAPFPW PKSRDYVPFA NCPYKSLTVE KAIQNWVQFE GNVFRFPGGG TQFPQGADKY IDQLASVVPI
201: ANGTVRTALD TGCGVASWGA YLLKRNVLAM SFAPRDSHEA QVQFALERGV PAVIGVLGTI KLPYPSRAFD MAHCSRCLIP WGANGGIYMM EVDRVLRPGG
301: YWVLSGPPIN WKVNYKGWQR TKKDLEAEQN KIEEIADLLC WEKVKEIGEM AIWRKRLNTE SCPSRQDESS VQMCDSTNAD DVWYKKMKPC VTPIPDVNDP
401: SEVAGGAIKP FPSRLNAVPP RIANGLIPGV SSQAYQKDIK MWKKHVKAYS SVNKYLLTGR YRNIMDMNAG FGGFAAAIES PKSWVMNAVP TISKMSTLGA
501: IYERGLIGIY HDWCEAFSTY PRTYDLIHAS GLFTLYKNKC NMEDILLEMD RVLRPEGAVI MRDDVDILTK VNRLALGMKW NTRLVDHEDG PMVREKVLYA
601: VKQYWVGGNQ TAAAAA
Best Arabidopsis Sequence Match ( AT1G26850.2 )
(BLAST)
001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
Arabidopsis Description
Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.