Factsheet for Solyc06g069870.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
mitochondrion 1
endoplasmic reticulum 4
extracellular 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g116150.2.1	Tomato	nucleus	76.75	80.82
VIT_17s0000g06050.t01	Wine grape	cytosol	77.56	78.2
GSMUA_Achr3P20050_001	Banana	endoplasmic reticulum, golgi	73.5	76.61
KRH63351	Soybean	endoplasmic reticulum	75.12	76.24
TraesCS5D01G234300.1	Wheat	endoplasmic reticulum, golgi	75.45	75.57
TraesCS5A01G226900.1	Wheat	golgi	74.96	75.08
TraesCS5B01G225500.1	Wheat	cytosol, endoplasmic reticulum, golgi	74.8	74.92
KRH54546	Soybean	golgi	70.24	74.74
HORVU5Hr1G065680.2	Barley	cytosol, endoplasmic reticulum, golgi	74.47	74.59
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi	74.63	74.39
Solyc05g007490.2.1	Tomato	nucleus, plastid, unclear	73.98	74.35
GSMUA_Achr8P16940_001	Banana	endoplasmic reticulum, golgi	42.93	73.95
GSMUA_Achr3P01520_001	Banana	endoplasmic reticulum, golgi	70.57	73.56
Zm00001d020461_P001	Maize	plasma membrane	73.01	73.01
Solyc01g010870.2.1	Tomato	nucleus, unclear	72.03	72.98
EER96732	Sorghum	endoplasmic reticulum, golgi	72.85	72.49
HORVU5Hr1G102720.2	Barley	cytosol	60.0	72.21
Os09t0415700-01	Rice	golgi	71.54	71.43
Os03t0379100-01	Rice	endoplasmic reticulum, golgi, vacuole	68.62	69.07
TraesCS5D01G429900.1	Wheat	endoplasmic reticulum, golgi, vacuole	68.29	68.63
EER94782	Sorghum	endoplasmic reticulum, golgi, vacuole	67.48	68.03
TraesCS5B01G423200.2	Wheat	cytosol, endoplasmic reticulum, golgi, mitochondrion	68.29	67.63
TraesCS5A01G421600.2	Wheat	endoplasmic reticulum	67.97	67.31
Solyc08g077240.2.1	Tomato	nucleus	66.02	65.91
Zm00001d029336_P002	Maize	cytosol	68.13	60.99
Zm00001d047183_P002	Maize	golgi	57.07	56.25
Solyc08g013740.2.1	Tomato	unclear	55.12	53.72
Solyc06g035790.2.1	Tomato	plastid	55.28	52.23
Solyc03g026120.2.1	Tomato	plastid	54.96	52.0
Solyc01g009600.2.1	Tomato	plastid	52.36	50.79
Solyc01g091690.2.1	Tomato	plastid	51.71	50.0
Solyc08g005490.2.1	Tomato	nucleus, unclear	40.65	41.88
Solyc01g091640.2.1	Tomato	nucleus	40.16	41.24
Solyc08g075870.2.1	Tomato	nucleus, unclear	40.0	41.21
Solyc09g090190.2.1	Tomato	nucleus	38.7	38.51
Solyc03g005600.2.1	Tomato	nucleus, unclear	38.21	37.9
Solyc02g067890.2.1	Tomato	nucleus	37.07	37.38
Solyc10g079450.1.1	Tomato	plasma membrane	34.96	35.19
Solyc05g052970.2.1	Tomato	endoplasmic reticulum	36.91	33.48
Solyc06g051000.2.1	Tomato	plastid	33.66	32.24
Solyc04g058180.2.1	Tomato	plastid	33.01	31.42
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	36.91	29.56
Solyc05g056580.2.1	Tomato	golgi	37.24	28.17
Solyc05g052500.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	34.63	27.31
Solyc02g084670.2.1	Tomato	unclear	36.26	25.25
Solyc04g080360.2.1	Tomato	nucleus	31.38	24.81

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008757	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	UniProt:K4C8F9
PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF1053	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
EnsemblPlantsGene:Solyc06g069870.2	EnsemblPlants:Solyc06g069870.2.1	TMHMM:TMhelix	UniParc:UPI0002766D30	SEG:seg	:

Description

No Description!

Coordinates

chr6:+:43502412..43506452

Molecular Weight (calculated)

69801.2 Da

IEP (calculated)

6.667

GRAVY (calculated)

-0.435

Length

615 amino acids

Sequence
(BLAST)

001: MATKGNPGDN RNKSFLPSLL VIAALCCFFY VLGVWKRSGF GKGDSIALEI TKKAEDCGIL PNLEYETHHG NQSTSFDDPK QDVKEIEPCG EQYIDYTPCH
101: DQMRAMTFPR ENMNYRERHC PPDEEKLHCL VPAPKGYVTP FSWPKSRDYV PFANAPHKSL TVEKAVQNWV QYEGDVFRFP GGGTQFPNGA DAYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLFKKNV LTMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPSR AFDMAHCSRC LIPWGANDGL YMTEVDRVLR
301: PGGYWVLSGP PINWRVNYQA WQRPKEELEE EQRKIEEMAE LLCWEKKHEK GETAIWRKRV NNEYCREHDS RVTLCESSNA ANVWYKKMEA CITPYPETTN
401: SDEVAGGGLQ PFPDRLNTVP PRIASGSVPG FSVEAFKEDN KLWKKHVNSY KRVNKILDNG RYRNIMDMNA GLGSFAAALE SPKLWVMNVV PTIAEKDTLG
501: VVYERGLIGI YHDWCEAFST YPRTYDLIHA NRVFSLYKDK CSVEDILLEM DRILRPEGAV ILRDHVDVLT QVKRIATGMR WNIKMVDHED GPLIPEKVLF
601: AVRKYWVVGD NNSTV

Best Arabidopsis Sequence Match ( AT1G26850.2 )
(BLAST)

001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH

Arabidopsis Description

Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.