Factsheet for Solyc05g052500.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
endoplasmic reticulum 3
golgi 4
plastid 1
extracellular 2
vacuole 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, golgi, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069743	Potato	endoplasmic reticulum, golgi	76.54	97.39
Solyc06g051000.2.1	Tomato	plastid	57.95	70.41
CDY10370	Canola	cytosol	24.49	69.45
VIT_13s0067g01690.t01	Wine grape	endoplasmic reticulum, golgi	53.85	69.31
KRH14916	Soybean	nucleus	52.82	69.24
KRH73268	Soybean	endoplasmic reticulum	52.56	68.91
KRH31179	Soybean	plasma membrane	51.28	67.34
KRG97692	Soybean	plastid	32.69	66.06
CDY07611	Canola	endoplasmic reticulum, extracellular, vacuole	48.21	64.38
Bra000181.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	48.21	64.38
AT2G40280.1	Thale cress	extracellular, plasma membrane	48.59	64.35
GSMUA_Achr4P18750_001	Banana	endoplasmic reticulum, golgi	48.72	61.09
AT3G56080.1	Thale cress	endoplasmic reticulum, vacuole	47.31	60.49
CDY43341	Canola	endoplasmic reticulum, golgi, vacuole	46.41	59.83
CDX76062	Canola	endoplasmic reticulum, golgi, vacuole	47.18	55.76
CDY24913	Canola	mitochondrion	47.95	55.65
TraesCS1D01G294500.1	Wheat	golgi, plasma membrane, plastid	46.03	53.82
Os01t0828300-01	Rice	golgi, plastid	46.41	53.71
Bra014710.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	46.54	53.7
HORVU1Hr1G070430.8	Barley	golgi, plasma membrane, vacuole	45.13	53.66
TraesCS1B01G305900.1	Wheat	mitochondrion	45.77	53.52
TraesCS1A01G297000.1	Wheat	golgi	45.26	53.08
Os05t0472200-01	Rice	endoplasmic reticulum, golgi	43.97	52.69
Zm00001d043012_P018	Maize	golgi	45.38	50.94
TraesCS3A01G348800.1	Wheat	golgi	45.64	50.21
TraesCS3B01G380800.1	Wheat	plastid	46.03	50.0
TraesCS3D01G342700.1	Wheat	golgi	45.38	49.44
OQU87776	Sorghum	endoplasmic reticulum, golgi	41.28	47.56
HORVU3Hr1G088050.14	Barley	endoplasmic reticulum, plasma membrane	45.51	47.46
Zm00001d010599_P002	Maize	endoplasmic reticulum, plasma membrane, plastid	44.23	46.43
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	36.54	37.11
Solyc02g067890.2.1	Tomato	nucleus	28.97	37.05
Solyc03g116150.2.1	Tomato	nucleus	27.44	36.64
Solyc08g075870.2.1	Tomato	nucleus, unclear	27.95	36.52
Solyc05g056580.2.1	Tomato	golgi	37.69	36.16
Solyc08g005490.2.1	Tomato	nucleus, unclear	27.56	36.01
Solyc05g052970.2.1	Tomato	endoplasmic reticulum	31.28	35.99
Solyc09g090190.2.1	Tomato	nucleus	28.46	35.92
Solyc01g091640.2.1	Tomato	nucleus	27.44	35.73
Solyc03g005600.2.1	Tomato	nucleus, unclear	28.21	35.48
Solyc05g007490.2.1	Tomato	nucleus, plastid, unclear	27.69	35.29
Solyc01g010870.2.1	Tomato	nucleus, unclear	27.18	34.93
Solyc10g079450.1.1	Tomato	plasma membrane	27.18	34.7
Solyc06g069870.2.1	Tomato	endoplasmic reticulum	27.31	34.63
Solyc08g077240.2.1	Tomato	nucleus	27.31	34.58
Solyc01g091690.2.1	Tomato	plastid	27.56	33.8
Solyc04g058180.2.1	Tomato	plastid	27.82	33.59
Solyc08g013740.2.1	Tomato	unclear	27.05	33.44
Solyc03g026120.2.1	Tomato	plastid	27.44	32.92
Solyc06g035790.2.1	Tomato	plastid	27.44	32.87
Solyc02g084670.2.1	Tomato	unclear	36.92	32.62
Solyc01g009600.2.1	Tomato	plastid	26.28	32.33
Solyc04g080360.2.1	Tomato	nucleus	30.51	30.59

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757
GO:GO:0016740	GO:GO:0032259	UniProt:K4C1T1	PFAM:PF01190	PFAM:PF03141	PANTHER:PTHR10108
PANTHER:PTHR10108:SF887	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:Solyc05g052500.2	EnsemblPlants:Solyc05g052500.2.1
TMHMM:TMhelix	UniParc:UPI0002765D16	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5:+:62711115..62718457

Molecular Weight (calculated)

88439.9 Da

IEP (calculated)

7.732

GRAVY (calculated)

-0.267

Length

780 amino acids

Sequence
(BLAST)

001: MAISSMRNLF KERKIPFLFT FFLLLIFVTF LLISNSQKSP VFIATDISQH HSETPISSNP IVSQTQLNPI TKDSNPSEDF GLNDTKNDEL GVENFNWKLC
101: KGPVAVDYIP CLDNSEAIKA LKSRRHMEHR ERHCPDPSPR CLIPLPDGYK LPVPWPKSRD MIWYNNVPHP KLVEYKKDQN WVVKSGDYLV FPGGGTQFKD
201: GVTNYIESIQ KTFPEIDWGK HIRVILDVGC GVASFGGYLL DKNVITMSLA PKDEHEAQIQ FALERGIPAT LSVIGTQKLA FPDNAYDVIH CARCRVHWDG
301: DGGKPLMELN RILRPGGFFV WSATPVYRDD ERDKKVWKAM VALTEAICWK VVKKTFFDSA GVGLVIYQKP VSSSCYENRR ESNPPLCDQN NRSNSSWYAS
401: LDSCLVPLPT SSSGNTYKWP APWPQRLNNK PERLSQKTDN EDIFDEDTKH WAALVSDVYL GGLSINWSSV RNVMDMNAGY GGFASAIIDR PLWVMNVVPI
501: SEPDTLSIIF DRGLIGIYHD WCESFNTYPR TYDLLHSSFL FGNLTQRCDV VEVVVEMDRI VRPGGYVLVQ DTMPMLNKLR SILQSLHWSV NLQQEQFLVA
601: KKGFWRPHDK MAIKIQVILF VSSFLLAFGY GHGPAQPVDM TTTTVVIEGM VYCQSCDTYG SWSLQGAKPI ASAKISVICK NYKKRVNFYK AFETNEYGYF
701: YAELQGYKMG HSYLDHPLQS CHVKLVNSPQ EKCNVFSNIN YGINGAPLRF DDKVIDRSDY KAVIYTAGPL AFRPADCPPK

Best Arabidopsis Sequence Match ( AT2G40280.1 )
(BLAST)

001: MAISVQHVVV LLLSTLLIAI TFFLFTSDNA RFPFPSLSTT DYYTPIPKSP IPHRIVDVSS DQTPQKMKLN TSLEVGELKW DLCKGAESVD YIPCLDNYAA
101: IKQLKSRRHM EHRERHCPEP SPKCLLPLPD NYKPPVPWPK SRDMIWYDNV PHPKLVEYKK EQNWVKKEGE FLVFPGGGTQ FKFGVTHYVE FIEKALPSIK
201: WGKNIRVVLD VGCGVASFGG SLLDKDVITM SFAPKDEHEA QIQFALERGI PATLSVIGTQ QLTFPSNAFD LIHCARCRVH WDADGGKPLL ELNRVLRPGG
301: FFIWSATPVY RDNDRDSRIW NEMVSLTKSI CWKVVTKTVD SSGIGLVIYQ KPTSESCYNK RSTQDPPLCD KKEANGSWYV PLAKCLSKLP SGNVQSWPEL
401: WPKRLVSVKP QSISVKAETL KKDTEKWSAS VSDVYLKHLA VNWSTVRNVM DMNAGFGGFA AALINLPLWV MNVVPVDKPD TLSVVYDRGL IGVYHDWCES
501: VNTYPRTYDL LHSSFLLGDL TQRCEIVQVV AEIDRIVRPG GYLVVQDNME TIMKLESILG SLHWSTKIYE DRFLVGRKGF WRPAKPELR

Arabidopsis Description

Probable methyltransferase PMT23 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIZ3]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.