Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43341 | Canola | endoplasmic reticulum, golgi, vacuole | 85.25 | 85.95 |
| CDX76062 | Canola | endoplasmic reticulum, golgi, vacuole | 86.07 | 79.55 |
| Bra014710.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 85.25 | 76.92 |
| VIT_13s0067g01690.t01 | Wine grape | endoplasmic reticulum, golgi | 61.48 | 61.88 |
| AT2G40280.1 | Thale cress | extracellular, plasma membrane | 58.03 | 60.1 |
| PGSC0003DMT400069743 | Potato | endoplasmic reticulum, golgi | 59.67 | 59.38 |
| Solyc06g051000.2.1 | Tomato | plastid | 61.64 | 58.57 |
| PGSC0003DMT400077225 | Potato | plastid | 61.15 | 58.01 |
| GSMUA_Achr4P18750_001 | Banana | endoplasmic reticulum, golgi | 56.89 | 55.79 |
| Os05t0472200-01 | Rice | endoplasmic reticulum, golgi | 52.62 | 49.31 |
| HORVU1Hr1G070430.8 | Barley | golgi, plasma membrane, vacuole | 52.95 | 49.24 |
| Os01t0828300-01 | Rice | golgi, plastid | 54.26 | 49.11 |
| TraesCS1D01G294500.1 | Wheat | golgi, plasma membrane, plastid | 53.61 | 49.03 |
| TraesCS1B01G305900.1 | Wheat | mitochondrion | 53.11 | 48.58 |
| TraesCS1A01G297000.1 | Wheat | golgi | 52.62 | 48.27 |
| TraesCS3A01G348800.1 | Wheat | golgi | 55.41 | 47.67 |
| TraesCS3D01G342700.1 | Wheat | golgi | 55.9 | 47.63 |
| Solyc05g052500.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 60.49 | 47.31 |
| Zm00001d043012_P018 | Maize | golgi | 53.77 | 47.19 |
| TraesCS3B01G380800.1 | Wheat | plastid | 55.25 | 46.94 |
| HORVU3Hr1G088050.14 | Barley | endoplasmic reticulum, plasma membrane | 55.25 | 45.05 |
| Zm00001d010599_P002 | Maize | endoplasmic reticulum, plasma membrane, plastid | 53.11 | 43.61 |
| OQU87776 | Sorghum | endoplasmic reticulum, golgi | 48.03 | 43.28 |
| AT2G34300.3 | Thale cress | endoplasmic reticulum, golgi, vacuole | 47.7 | 37.79 |
| AT4G19120.2 | Thale cress | cytosol, endoplasmic reticulum, golgi | 36.89 | 37.5 |
| AT1G29470.1 | Thale cress | golgi | 46.07 | 36.49 |
| AT1G31850.3 | Thale cress | cytosol, endoplasmic reticulum, golgi | 35.9 | 36.32 |
| AT5G14430.1 | Thale cress | endoplasmic reticulum | 36.07 | 35.95 |
| AT4G18030.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 35.74 | 35.1 |
| AT4G14360.2 | Thale cress | endoplasmic reticulum, golgi | 34.92 | 35.03 |
| AT5G04060.1 | Thale cress | plasma membrane, plastid | 34.43 | 35.0 |
| AT5G06050.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 39.02 | 34.9 |
| AT5G64030.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 47.38 | 34.86 |
| AT1G77260.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 37.38 | 34.81 |
| AT3G23300.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 34.75 | 34.7 |
| AT4G00740.1 | Thale cress | golgi | 33.77 | 34.33 |
| AT3G10200.2 | Thale cress | extracellular, plasma membrane, vacuole | 33.61 | 34.22 |
| AT2G43200.2 | Thale cress | endoplasmic reticulum, golgi | 34.26 | 34.21 |
| AT2G39750.1 | Thale cress | endoplasmic reticulum, golgi | 38.85 | 34.15 |
| AT2G45750.1 | Thale cress | endoplasmic reticulum, golgi | 35.08 | 33.91 |
| AT1G04430.1 | Thale cress | endoplasmic reticulum, golgi | 34.59 | 33.87 |
| AT1G33170.1 | Thale cress | cytosol | 34.92 | 33.33 |
| AT4G10440.1 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 34.43 | 33.18 |
| AT1G19430.1 | Thale cress | mitochondrion | 38.69 | 32.6 |
| AT4G00750.1 | Thale cress | mitochondrion | 33.77 | 32.54 |
| AT1G26850.2 | Thale cress | endoplasmic reticulum, golgi | 32.13 | 31.82 |
| AT3G51070.1 | Thale cress | extracellular, mitochondrion, plasma membrane, plastid, vacuole | 46.56 | 31.73 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.1 | EntrezGene:824774 | ProteinID:AEE79475.1 | ProteinID:ANM64610.1 | ArrayExpress:AT3G56080 |
| EnsemblPlantsGene:AT3G56080 | RefSeq:AT3G56080 | TAIR:AT3G56080 | RefSeq:AT3G56080-TAIR-G | EnsemblPlants:AT3G56080.1 | TAIR:AT3G56080.1 |
| ProteinID:CAB87407.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0008757 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0032259 | RefSeq:NP_001326626.1 |
| RefSeq:NP_567033.2 | PFAM:PF03141 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR10108 |
| PANTHER:PTHR10108:SF887 | InterPro:Put_SAM_MeTrfase | UniProt:Q9LYN3 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | TMHMM:TMhelix |
| UniParc:UPI00000AA47A | SEG:seg | : | : | : | : |
Description
Probable methyltransferase PMT22 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYN3]
Coordinates
chr3:-:20810309..20813110
Molecular Weight (calculated)
69995.5 Da
IEP (calculated)
8.592
GRAVY (calculated)
-0.310
Length
610 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKNIFQSRK LSGLCVLSIL LVSVTILLLT NDTIDLFPYL SLPYLPRSSL SVIPTSTPIS SPTNDSSPPL ESPVNQTRVD DHPDDQGLEL DWLKDDKQWN
101: VSLKIDWKRC ESPDYIPCLD NTKAIKKLKS KRNMEHRERH CPERSPKCLV PLPQHYKVPL PWPQSRDMIW YDNVPHPKLV EYKKDQNWVR KSGPFFVFPG
201: GGTQFKDGVI HYINFIQKTL PILDWGKKVR VVLDVGCGVA SFGGTLLDKN VITMSFAPKD EHEAQIQFAL ERGIPATLAV IGTQKLPFPD NAYDVIHCAR
301: CRVHWHGYGG RPLLELNRVL RPGGFFVWSA TPVYQHDEGH RNVWKTMESL TTSMCWKVVA RTRFTKVGFV IYQKPDSDSC YESRKNKDPP LCIEEETKKN
401: SSWYTPLLTC LPKLPVSPIG KWPSGWPERL TETPVSLFRE QRSEESFRED SKLWSGVMSN IYLYSLAINW TRIHNVMDMN AGYGGFAAAL INKPLWVMNV
501: IPVEGEDTLS TIFDRGLIGI YHDWCESFNT YPRSYDLLHS SFLFTNLSQR CDLMEVVVEI DRILRPGGYL AVQDTVEMLK KLNPILLSLR WSTNLYRGKF
601: LVGLKSSWRP
101: VSLKIDWKRC ESPDYIPCLD NTKAIKKLKS KRNMEHRERH CPERSPKCLV PLPQHYKVPL PWPQSRDMIW YDNVPHPKLV EYKKDQNWVR KSGPFFVFPG
201: GGTQFKDGVI HYINFIQKTL PILDWGKKVR VVLDVGCGVA SFGGTLLDKN VITMSFAPKD EHEAQIQFAL ERGIPATLAV IGTQKLPFPD NAYDVIHCAR
301: CRVHWHGYGG RPLLELNRVL RPGGFFVWSA TPVYQHDEGH RNVWKTMESL TTSMCWKVVA RTRFTKVGFV IYQKPDSDSC YESRKNKDPP LCIEEETKKN
401: SSWYTPLLTC LPKLPVSPIG KWPSGWPERL TETPVSLFRE QRSEESFRED SKLWSGVMSN IYLYSLAINW TRIHNVMDMN AGYGGFAAAL INKPLWVMNV
501: IPVEGEDTLS TIFDRGLIGI YHDWCESFNT YPRSYDLLHS SFLFTNLSQR CDLMEVVVEI DRILRPGGYL AVQDTVEMLK KLNPILLSLR WSTNLYRGKF
601: LVGLKSSWRP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.