Factsheet for PGSC0003DMT400077225

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g051000.2.1	Tomato	plastid	95.02	95.17
PGSC0003DMT400069743	Potato	endoplasmic reticulum, golgi	70.3	73.74
VIT_13s0067g01690.t01	Wine grape	endoplasmic reticulum, golgi	64.07	67.99
KRH31179	Soybean	plasma membrane	61.12	66.16
KRH14916	Soybean	nucleus	60.96	65.88
KRH73268	Soybean	endoplasmic reticulum	60.5	65.38
CDY10370	Canola	cytosol	27.68	64.73
KRG97692	Soybean	plastid	38.1	63.47
Bra000181.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	55.99	61.64
CDY07611	Canola	endoplasmic reticulum, extracellular, vacuole	55.99	61.64
AT2G40280.1	Thale cress	extracellular, plasma membrane	56.3	61.46
CDY43341	Canola	endoplasmic reticulum, golgi, vacuole	57.7	61.32
AT3G56080.1	Thale cress	endoplasmic reticulum, vacuole	58.01	61.15
GSMUA_Achr4P18750_001	Banana	endoplasmic reticulum, golgi	56.14	58.04
CDX76062	Canola	endoplasmic reticulum, golgi, vacuole	58.48	56.97
Bra014710.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	57.85	55.03
CDY24913	Canola	mitochondrion	55.37	52.98
Os01t0828300-01	Rice	golgi, plastid	54.43	51.93
TraesCS1D01G294500.1	Wheat	golgi, plasma membrane, plastid	53.65	51.72
HORVU1Hr1G070430.8	Barley	golgi, plasma membrane, vacuole	52.72	51.68
TraesCS1B01G305900.1	Wheat	mitochondrion	53.19	51.27
Os05t0472200-01	Rice	endoplasmic reticulum, golgi	51.32	50.69
TraesCS1A01G297000.1	Wheat	golgi	52.26	50.53
TraesCS3A01G348800.1	Wheat	golgi	54.9	49.79
Zm00001d043012_P018	Maize	golgi	53.5	49.5
TraesCS3B01G380800.1	Wheat	plastid	54.74	49.03
TraesCS3D01G342700.1	Wheat	golgi	54.59	49.02
OQU87776	Sorghum	endoplasmic reticulum, golgi	48.99	46.53
HORVU3Hr1G088050.14	Barley	endoplasmic reticulum, plasma membrane	54.12	46.52
Zm00001d010599_P002	Maize	endoplasmic reticulum, plasma membrane, plastid	52.72	45.63
PGSC0003DMT400059283	Potato	cytosol	32.97	38.2
PGSC0003DMT400017929	Potato	endoplasmic reticulum, golgi	35.3	37.21
PGSC0003DMT400006139	Potato	nucleus	45.41	36.64
PGSC0003DMT400069783	Potato	endoplasmic reticulum	38.26	36.28
PGSC0003DMT400079286	Potato	cytosol	33.59	36.18
PGSC0003DMT400034882	Potato	cytosol, endoplasmic reticulum, golgi, mitochondrion	34.53	35.86
PGSC0003DMT400044353	Potato	endoplasmic reticulum, golgi	34.37	35.76
PGSC0003DMT400009110	Potato	cytosol	45.41	35.61
PGSC0003DMT400059933	Potato	golgi	44.95	35.55
PGSC0003DMT400071370	Potato	endoplasmic reticulum, golgi	35.15	35.53
PGSC0003DMT400071375	Potato	mitochondrion	32.97	35.39
PGSC0003DMT400047515	Potato	cytosol, golgi, plasma membrane	32.81	35.34
PGSC0003DMT400080300	Potato	endoplasmic reticulum, golgi	32.81	34.48
PGSC0003DMT400050242	Potato	golgi	32.97	34.42
PGSC0003DMT400016774	Potato	endoplasmic reticulum, golgi	32.66	34.31
PGSC0003DMT400062230	Potato	endoplasmic reticulum, golgi	32.19	33.6
PGSC0003DMT400027588	Potato	endoplasmic reticulum, plasma membrane, plastid	29.86	33.51
PGSC0003DMT400014851	Potato	cytosol	32.35	33.33
PGSC0003DMT400037042	Potato	plastid	32.81	32.61
PGSC0003DMT400030542	Potato	plastid	32.19	32.5
PGSC0003DMT400065051	Potato	plastid	32.97	32.42
PGSC0003DMT400009562	Potato	golgi, mitochondrion	36.55	30.21

Protein Annotations

EntrezGene:102587073	Gene3D:3.40.50.150	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	UniProt:M1CY28	PFAM:PF03141
EnsemblPlantsGene:PGSC0003DMG400030037	PGSC:PGSC0003DMG400030037	EnsemblPlants:PGSC0003DMT400077225	PANTHER:PTHR10108	PANTHER:PTHR10108:SF887	InterPro:Put_SAM_MeTrfase
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix	UniParc:UPI0002967058	RefSeq:XP_006353441.1	SEG:seg

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400030037]

Coordinates

chr6:-:29802415..29805394

Molecular Weight (calculated)

73700.6 Da

IEP (calculated)

8.642

GRAVY (calculated)

-0.335

Length

643 amino acids

Sequence
(BLAST)

001: MAISSASSSM QDMFKQRKYP FIFSLFLLLM FVTFLLISNS QKSPIFAAMD FAQRTALIKS VPEFNPNSNS TSTSTNLHQS DENNNTSINH ESPLNNVRID
101: PKSSNIPLTI NPEKSDTIIS DELETFSYHW KLCPGPLAVD YIPCLDNWKA IKKIKSRRHM EHRERHCPVP SPRCLIPLPK GYKLPLPWPK SRDMIWYDNV
201: PHPKLVEYKK DQNWVKKSGD YFVFPGGGTQ FRDGVNHYIE FIEETFPTIQ WGKSIRVLLD VGCGVASFGG YLLDKNVITM SFAPKDEHEA QIQFALERGI
301: PATLSVIATK KLAFPDNVYD MIHCARCRVH WHADGGKPLM ELNRILRPGG YFIWSATPVY KKDEGHKNVW KVMVNLTEAM CWKMVARTFF KRGRVGLVIY
401: QKSDSSSCYE NRKENIPPMC DQKKNRLNSS WYTPLDSCLL PLASSNYKWP APWPQRLNTK PLSLSLETDA EETFNEDTRH WASLVSDVYL GGLAINWSSV
501: RNVMDMNAGY GGFATALIDR PLWVMNVVPI SGPDTLPIIF DRGLVGTYHD WCESFNTYPR TYDLLHSSFL YGNLSQRCDL VDVAVEMDRM VRPGGYILVQ
601: DTIQMIKQLG SILRSLHWSV TLHQHQFLVG KKDFWRPKDV ARE

Best Arabidopsis Sequence Match ( AT3G56080.1 )
(BLAST)

001: MIKNIFQSRK LSGLCVLSIL LVSVTILLLT NDTIDLFPYL SLPYLPRSSL SVIPTSTPIS SPTNDSSPPL ESPVNQTRVD DHPDDQGLEL DWLKDDKQWN
101: VSLKIDWKRC ESPDYIPCLD NTKAIKKLKS KRNMEHRERH CPERSPKCLV PLPQHYKVPL PWPQSRDMIW YDNVPHPKLV EYKKDQNWVR KSGPFFVFPG
201: GGTQFKDGVI HYINFIQKTL PILDWGKKVR VVLDVGCGVA SFGGTLLDKN VITMSFAPKD EHEAQIQFAL ERGIPATLAV IGTQKLPFPD NAYDVIHCAR
301: CRVHWHGYGG RPLLELNRVL RPGGFFVWSA TPVYQHDEGH RNVWKTMESL TTSMCWKVVA RTRFTKVGFV IYQKPDSDSC YESRKNKDPP LCIEEETKKN
401: SSWYTPLLTC LPKLPVSPIG KWPSGWPERL TETPVSLFRE QRSEESFRED SKLWSGVMSN IYLYSLAINW TRIHNVMDMN AGYGGFAAAL INKPLWVMNV
501: IPVEGEDTLS TIFDRGLIGI YHDWCESFNT YPRSYDLLHS SFLFTNLSQR CDLMEVVVEI DRILRPGGYL AVQDTVEMLK KLNPILLSLR WSTNLYRGKF
601: LVGLKSSWRP

Arabidopsis Description

Probable methyltransferase PMT22 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYN3]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.